RNA–Protein interactions for RNA: ENST00000370234.4

MRPL43-205, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 1 (best) BASIC

Gene MRPL43, Length 798 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-205ENST00000370234 NISCHQ9Y2I1 1504 aa45.42■■■■■ 4.86
MRPL43-205ENST00000370234 CCDC180Q9P1Z9 1646 aa40.86■■■■■ 4.13
MRPL43-205ENST00000370234 ABCC9O60706 1549 aa40.86■■■■■ 4.13
MRPL43-205ENST00000370234 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
MRPL43-205ENST00000370234 NACADO15069 1562 aa38.57■■■■□ 3.77
MRPL43-205ENST00000370234 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
MRPL43-205ENST00000370234 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
MRPL43-205ENST00000370234 UNC13AQ9UPW8 1703 aa38.14■■■■□ 3.7
MRPL43-205ENST00000370234 MYO15BQ96JP2 1530 aa38.01■■■■□ 3.67
MRPL43-205ENST00000370234 PABPN1Q86U42 306 aaKnown RBP eCLIP37.97■■■■□ 3.67
MRPL43-205ENST00000370234 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
MRPL43-205ENST00000370234 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
MRPL43-205ENST00000370234 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.6
MRPL43-205ENST00000370234 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
MRPL43-205ENST00000370234 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
MRPL43-205ENST00000370234 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
MRPL43-205ENST00000370234 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
MRPL43-205ENST00000370234 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
MRPL43-205ENST00000370234 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
MRPL43-205ENST00000370234 SMARCA4P51532 1647 aa35.5■■■■□ 3.27
MRPL43-205ENST00000370234 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
MRPL43-205ENST00000370234 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
MRPL43-205ENST00000370234 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
MRPL43-205ENST00000370234 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
MRPL43-205ENST00000370234 CUX2O14529 1486 aa35.23■■■■□ 3.23
MRPL43-205ENST00000370234 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
MRPL43-205ENST00000370234 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
MRPL43-205ENST00000370234 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
MRPL43-205ENST00000370234 BAZ1BQ9UIG0 1483 aaKnown RBP35.13■■■■□ 3.21
MRPL43-205ENST00000370234 NESP48681 1621 aa35.12■■■■□ 3.21
MRPL43-205ENST00000370234 MROH2BQ7Z745 1585 aa35.03■■■■□ 3.2
MRPL43-205ENST00000370234 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
MRPL43-205ENST00000370234 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
MRPL43-205ENST00000370234 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
MRPL43-205ENST00000370234 WIZO95785 1651 aa34.63■■■■□ 3.13
MRPL43-205ENST00000370234 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
MRPL43-205ENST00000370234 CADPSQ9ULU8 1353 aa34.48■■■■□ 3.11
MRPL43-205ENST00000370234 MRC2Q9UBG0 1479 aa34.33■■■■□ 3.09
MRPL43-205ENST00000370234 WDR62O43379 1518 aa34.29■■■■□ 3.08
MRPL43-205ENST00000370234 RSF1Q96T23 1441 aaPredicted RBP34.22■■■■□ 3.07
MRPL43-205ENST00000370234 CEP164Q9UPV0 1460 aa34.17■■■■□ 3.06
MRPL43-205ENST00000370234 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
MRPL43-205ENST00000370234 FANCD2Q9BXW9 1451 aa34.13■■■■□ 3.05
MRPL43-205ENST00000370234 CFTRP13569 1480 aa34.11■■■■□ 3.05
MRPL43-205ENST00000370234 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
MRPL43-205ENST00000370234 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
MRPL43-205ENST00000370234 CCDC88BA6NC98 1476 aa33.74■■■□□ 2.99
MRPL43-205ENST00000370234 TRIM41Q8WV44 630 aa33.64■■■□□ 2.98
MRPL43-205ENST00000370234 OSCARQ8IYS5 282 aa33.5■■■□□ 2.95
MRPL43-205ENST00000370234 TOPBP1Q92547 1522 aa33.49■■■□□ 2.95
MRPL43-205ENST00000370234 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
MRPL43-205ENST00000370234 IFT140Q96RY7 1462 aa33.48■■■□□ 2.95
MRPL43-205ENST00000370234 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
MRPL43-205ENST00000370234 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
MRPL43-205ENST00000370234 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
MRPL43-205ENST00000370234 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
MRPL43-205ENST00000370234 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
MRPL43-205ENST00000370234 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
MRPL43-205ENST00000370234 TARBP1Q13395 1621 aaKnown RBP33.25■■■□□ 2.91
MRPL43-205ENST00000370234 POLA1P09884 1462 aaPredicted RBP33.15■■■□□ 2.9
MRPL43-205ENST00000370234 CHD1O14646 1710 aa33.14■■■□□ 2.89
MRPL43-205ENST00000370234 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.895e-8■■■■□ 19.3
MRPL43-205ENST00000370234 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
MRPL43-205ENST00000370234 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
MRPL43-205ENST00000370234 SOGA1O94964 1423 aa32.93■■■□□ 2.86
MRPL43-205ENST00000370234 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
MRPL43-205ENST00000370234 CUX1P39880 1505 aa32.92■■■□□ 2.86
MRPL43-205ENST00000370234 TDRD9Q8NDG6 1382 aaKnown RBP32.88■■■□□ 2.85
MRPL43-205ENST00000370234 WDR97A6NE52 1622 aa32.87■■■□□ 2.85
MRPL43-205ENST00000370234 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
MRPL43-205ENST00000370234 FBLN2P98095 1184 aa32.82■■■□□ 2.84
MRPL43-205ENST00000370234 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
MRPL43-205ENST00000370234 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
MRPL43-205ENST00000370234 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
MRPL43-205ENST00000370234 MAGI1Q96QZ7 1491 aaPredicted RBP32.69■■■□□ 2.82
MRPL43-205ENST00000370234 GRIN2BQ13224 1484 aa32.68■■■□□ 2.82
MRPL43-205ENST00000370234 PBRM1Q86U86 1689 aa32.67■■■□□ 2.82
MRPL43-205ENST00000370234 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
MRPL43-205ENST00000370234 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
MRPL43-205ENST00000370234 ABCA5Q8WWZ7 1642 aa32.58■■■□□ 2.81
MRPL43-205ENST00000370234 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
MRPL43-205ENST00000370234 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
MRPL43-205ENST00000370234 GAPVD1Q14C86 1478 aa32.55■■■□□ 2.8
MRPL43-205ENST00000370234 ABCA10Q8WWZ4 1543 aa32.54■■■□□ 2.8
MRPL43-205ENST00000370234 BIVM-ERCC5R4GMW8 1640 aa32.4■■■□□ 2.78
MRPL43-205ENST00000370234 TRHP20396 242 aaPredicted RBP32.37■■■□□ 2.77
MRPL43-205ENST00000370234 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
MRPL43-205ENST00000370234 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
MRPL43-205ENST00000370234 ADAMTS12P58397 1594 aa32.33■■■□□ 2.77
MRPL43-205ENST00000370234 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
MRPL43-205ENST00000370234 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
MRPL43-205ENST00000370234 ERCC6L2Q5T890 1561 aa32.22■■■□□ 2.75
MRPL43-205ENST00000370234 NUP160Q12769 1436 aa32.18■■■□□ 2.74
MRPL43-205ENST00000370234 FHAD1B1AJZ9 1412 aa32.13■■■□□ 2.73
MRPL43-205ENST00000370234 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
MRPL43-205ENST00000370234 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
MRPL43-205ENST00000370234 RUSC2Q8N2Y8 1516 aa31.88■■■□□ 2.69
MRPL43-205ENST00000370234 PRG4Q92954 1404 aaPredicted RBP31.83■■■□□ 2.69
MRPL43-205ENST00000370234 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
MRPL43-205ENST00000370234 JPH4Q96JJ6 628 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms