RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 NISCHQ9Y2I1 1504 aa43.84■■■■■ 4.61
AP003555.3-201ENST00000534086 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
AP003555.3-201ENST00000534086 ABCC9O60706 1549 aa38.86■■■■□ 3.81
AP003555.3-201ENST00000534086 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
AP003555.3-201ENST00000534086 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
AP003555.3-201ENST00000534086 NACADO15069 1562 aa36.96■■■■□ 3.51
AP003555.3-201ENST00000534086 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
AP003555.3-201ENST00000534086 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
AP003555.3-201ENST00000534086 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
AP003555.3-201ENST00000534086 UNC13AQ9UPW8 1703 aa36.25■■■■□ 3.39
AP003555.3-201ENST00000534086 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
AP003555.3-201ENST00000534086 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
AP003555.3-201ENST00000534086 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
AP003555.3-201ENST00000534086 SCRIBQ14160 1630 aa35.72■■■■□ 3.31
AP003555.3-201ENST00000534086 SHROOM4Q9ULL8 1493 aa35.57■■■■□ 3.28
AP003555.3-201ENST00000534086 EIF4G1Q04637 1599 aaKnown RBP35.11■■■■□ 3.21
AP003555.3-201ENST00000534086 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
AP003555.3-201ENST00000534086 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
AP003555.3-201ENST00000534086 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
AP003555.3-201ENST00000534086 SMARCA4P51532 1647 aa34.11■■■■□ 3.05
AP003555.3-201ENST00000534086 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.05
AP003555.3-201ENST00000534086 BAZ1AQ9NRL2 1556 aaPredicted RBP34.01■■■■□ 3.03
AP003555.3-201ENST00000534086 SMARCA2P51531 1590 aa34■■■■□ 3.03
AP003555.3-201ENST00000534086 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
AP003555.3-201ENST00000534086 MROH2BQ7Z745 1585 aa33.79■■■■□ 3
AP003555.3-201ENST00000534086 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
AP003555.3-201ENST00000534086 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
AP003555.3-201ENST00000534086 ERCC6Q03468 1493 aa33.55■■■□□ 2.96
AP003555.3-201ENST00000534086 NESP48681 1621 aa33.47■■■□□ 2.95
AP003555.3-201ENST00000534086 WIZO95785 1651 aa33.39■■■□□ 2.94
AP003555.3-201ENST00000534086 CUX2O14529 1486 aa33.33■■■□□ 2.93
AP003555.3-201ENST00000534086 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
AP003555.3-201ENST00000534086 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
AP003555.3-201ENST00000534086 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
AP003555.3-201ENST00000534086 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
AP003555.3-201ENST00000534086 KIF21AQ7Z4S6 1674 aa33.03■■■□□ 2.88
AP003555.3-201ENST00000534086 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
AP003555.3-201ENST00000534086 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
AP003555.3-201ENST00000534086 DNAJC5Q9H3Z4 198 aa32.96■■■□□ 2.87
AP003555.3-201ENST00000534086 CFTRP13569 1480 aa32.8■■■□□ 2.84
AP003555.3-201ENST00000534086 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
AP003555.3-201ENST00000534086 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
AP003555.3-201ENST00000534086 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
AP003555.3-201ENST00000534086 WDR62O43379 1518 aa32.67■■■□□ 2.82
AP003555.3-201ENST00000534086 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
AP003555.3-201ENST00000534086 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
AP003555.3-201ENST00000534086 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
AP003555.3-201ENST00000534086 TOPBP1Q92547 1522 aa32.15■■■□□ 2.74
AP003555.3-201ENST00000534086 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
AP003555.3-201ENST00000534086 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
AP003555.3-201ENST00000534086 IFT140Q96RY7 1462 aa32.08■■■□□ 2.73
AP003555.3-201ENST00000534086 DNMBPQ6XZF7 1577 aa32.06■■■□□ 2.72
AP003555.3-201ENST00000534086 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
AP003555.3-201ENST00000534086 OSCARQ8IYS5 282 aa31.95■■■□□ 2.71
AP003555.3-201ENST00000534086 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
AP003555.3-201ENST00000534086 TARBP1Q13395 1621 aaKnown RBP31.82■■■□□ 2.68
AP003555.3-201ENST00000534086 EIF4G3O43432 1585 aaKnown RBP31.79■■■□□ 2.68
AP003555.3-201ENST00000534086 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.67
AP003555.3-201ENST00000534086 SOGA1O94964 1423 aa31.75■■■□□ 2.67
AP003555.3-201ENST00000534086 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
AP003555.3-201ENST00000534086 CUX1P39880 1505 aa31.72■■■□□ 2.67
AP003555.3-201ENST00000534086 FGD5Q6ZNL6 1462 aa31.7■■■□□ 2.66
AP003555.3-201ENST00000534086 TRIM41Q8WV44 630 aa31.69■■■□□ 2.66
AP003555.3-201ENST00000534086 TDRD9Q8NDG6 1382 aaKnown RBP31.64■■■□□ 2.66
AP003555.3-201ENST00000534086 FBLN2P98095 1184 aa31.54■■■□□ 2.64
AP003555.3-201ENST00000534086 WDR97A6NE52 1622 aa31.52■■■□□ 2.64
AP003555.3-201ENST00000534086 CHD1O14646 1710 aa31.49■■■□□ 2.63
AP003555.3-201ENST00000534086 SNAPC4Q5SXM2 1469 aa31.43■■■□□ 2.62
AP003555.3-201ENST00000534086 RIMBP3CA6NJZ7 1639 aa31.41■■■□□ 2.62
AP003555.3-201ENST00000534086 RIMBP3BA6NNM3 1639 aa31.41■■■□□ 2.62
AP003555.3-201ENST00000534086 RIMBP3Q9UFD9 1639 aa31.41■■■□□ 2.62
AP003555.3-201ENST00000534086 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
AP003555.3-201ENST00000534086 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
AP003555.3-201ENST00000534086 MAGI1Q96QZ7 1491 aaPredicted RBP31.36■■■□□ 2.61
AP003555.3-201ENST00000534086 CHMP7Q8WUX9 453 aaPredicted RBP31.36■■■□□ 2.61
AP003555.3-201ENST00000534086 ARHGEF11O15085 1522 aa31.35■■■□□ 2.61
AP003555.3-201ENST00000534086 GAPVD1Q14C86 1478 aa31.35■■■□□ 2.61
AP003555.3-201ENST00000534086 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
AP003555.3-201ENST00000534086 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
AP003555.3-201ENST00000534086 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
AP003555.3-201ENST00000534086 PBRM1Q86U86 1689 aa31.27■■■□□ 2.6
AP003555.3-201ENST00000534086 SYNJ1O43426 1573 aa31.26■■■□□ 2.6
AP003555.3-201ENST00000534086 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
AP003555.3-201ENST00000534086 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
AP003555.3-201ENST00000534086 CYB5RLQ6IPT4 315 aa31.18■■■□□ 2.58
AP003555.3-201ENST00000534086 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
AP003555.3-201ENST00000534086 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
AP003555.3-201ENST00000534086 GRIN2AQ12879 1464 aa30.99■■■□□ 2.55
AP003555.3-201ENST00000534086 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
AP003555.3-201ENST00000534086 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
AP003555.3-201ENST00000534086 FHAD1B1AJZ9 1412 aa30.97■■■□□ 2.55
AP003555.3-201ENST00000534086 NUP160Q12769 1436 aa30.87■■■□□ 2.53
AP003555.3-201ENST00000534086 CEP170Q5SW79 1584 aa30.84■■■□□ 2.53
AP003555.3-201ENST00000534086 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
AP003555.3-201ENST00000534086 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
AP003555.3-201ENST00000534086 IGF1RP08069 1367 aa30.69■■■□□ 2.5
AP003555.3-201ENST00000534086 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
AP003555.3-201ENST00000534086 SHROOM2Q13796 1616 aa30.66■■■□□ 2.5
AP003555.3-201ENST00000534086 JPH4Q96JJ6 628 aa30.63■■■□□ 2.49
AP003555.3-201ENST00000534086 CUL7Q14999 1698 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms