RNA–Protein interactions for RNA: ENST00000428222.1

AC004835.1-201, humanhuman

TSL 5 BASIC

Gene AC004835.1, Length 2,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004835.1-201ENST00000428222 NISCHQ9Y2I1 1504 aa33.98■■■■□ 3.03
AC004835.1-201ENST00000428222 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.43
AC004835.1-201ENST00000428222 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
AC004835.1-201ENST00000428222 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
AC004835.1-201ENST00000428222 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
AC004835.1-201ENST00000428222 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
AC004835.1-201ENST00000428222 MYO15BQ96JP2 1530 aa28.42■■■□□ 2.14
AC004835.1-201ENST00000428222 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
AC004835.1-201ENST00000428222 PCGF6Q9BYE7 350 aa28.21■■■□□ 2.11
AC004835.1-201ENST00000428222 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
AC004835.1-201ENST00000428222 HRCP23327 699 aa27.9■■■□□ 2.06
AC004835.1-201ENST00000428222 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
AC004835.1-201ENST00000428222 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
AC004835.1-201ENST00000428222 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
AC004835.1-201ENST00000428222 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
AC004835.1-201ENST00000428222 DCAF1Q9Y4B6 1507 aa27.37■■□□□ 1.97
AC004835.1-201ENST00000428222 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
AC004835.1-201ENST00000428222 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
AC004835.1-201ENST00000428222 TRIM26Q12899 539 aaPredicted RBP27.16■■□□□ 1.94
AC004835.1-201ENST00000428222 ABCC9O60706 1549 aa27.12■■□□□ 1.93
AC004835.1-201ENST00000428222 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
AC004835.1-201ENST00000428222 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.89
AC004835.1-201ENST00000428222 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
AC004835.1-201ENST00000428222 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
AC004835.1-201ENST00000428222 WIZO95785 1651 aa26.52■■□□□ 1.84
AC004835.1-201ENST00000428222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
AC004835.1-201ENST00000428222 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
AC004835.1-201ENST00000428222 NACADO15069 1562 aa26.35■■□□□ 1.81
AC004835.1-201ENST00000428222 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
AC004835.1-201ENST00000428222 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
AC004835.1-201ENST00000428222 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
AC004835.1-201ENST00000428222 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
AC004835.1-201ENST00000428222 RANGAP1P46060 587 aaPredicted RBP26.15■■□□□ 1.78
AC004835.1-201ENST00000428222 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
AC004835.1-201ENST00000428222 SOGA1O94964 1423 aa26.05■■□□□ 1.76
AC004835.1-201ENST00000428222 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
AC004835.1-201ENST00000428222 BAZ1AQ9NRL2 1556 aaPredicted RBP26.02■■□□□ 1.76
AC004835.1-201ENST00000428222 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
AC004835.1-201ENST00000428222 CEP162Q5TB80 1403 aa25.89■■□□□ 1.73
AC004835.1-201ENST00000428222 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
AC004835.1-201ENST00000428222 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
AC004835.1-201ENST00000428222 TOP2AP11388 1531 aaKnown RBP25.81■■□□□ 1.72
AC004835.1-201ENST00000428222 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
AC004835.1-201ENST00000428222 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
AC004835.1-201ENST00000428222 DIEXFQ68CQ4 756 aaKnown RBP25.79■■□□□ 1.72
AC004835.1-201ENST00000428222 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
AC004835.1-201ENST00000428222 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
AC004835.1-201ENST00000428222 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
AC004835.1-201ENST00000428222 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
AC004835.1-201ENST00000428222 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
AC004835.1-201ENST00000428222 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
AC004835.1-201ENST00000428222 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
AC004835.1-201ENST00000428222 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
AC004835.1-201ENST00000428222 APLP2Q06481 763 aa25.5■■□□□ 1.67
AC004835.1-201ENST00000428222 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
AC004835.1-201ENST00000428222 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.66
AC004835.1-201ENST00000428222 CLIP1P30622 1438 aa25.38■■□□□ 1.65
AC004835.1-201ENST00000428222 CENPBP07199 599 aaPredicted RBP25.38■■□□□ 1.65
AC004835.1-201ENST00000428222 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
AC004835.1-201ENST00000428222 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
AC004835.1-201ENST00000428222 EEA1Q15075 1411 aa25.35■■□□□ 1.65
AC004835.1-201ENST00000428222 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
AC004835.1-201ENST00000428222 MIER1Q8N108 512 aa25.29■■□□□ 1.64
AC004835.1-201ENST00000428222 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
AC004835.1-201ENST00000428222 ITGAEP38570 1179 aa25.27■■□□□ 1.64
AC004835.1-201ENST00000428222 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
AC004835.1-201ENST00000428222 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
AC004835.1-201ENST00000428222 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
AC004835.1-201ENST00000428222 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
AC004835.1-201ENST00000428222 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
AC004835.1-201ENST00000428222 KIF21BO75037 1637 aa24.99■■□□□ 1.59
AC004835.1-201ENST00000428222 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
AC004835.1-201ENST00000428222 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
AC004835.1-201ENST00000428222 P3H3Q8IVL6 736 aa24.91■■□□□ 1.58
AC004835.1-201ENST00000428222 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
AC004835.1-201ENST00000428222 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
AC004835.1-201ENST00000428222 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
AC004835.1-201ENST00000428222 CUX1P39880 1505 aa24.73■■□□□ 1.55
AC004835.1-201ENST00000428222 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
AC004835.1-201ENST00000428222 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
AC004835.1-201ENST00000428222 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
AC004835.1-201ENST00000428222 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
AC004835.1-201ENST00000428222 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
AC004835.1-201ENST00000428222 CUX2O14529 1486 aa24.61■■□□□ 1.53
AC004835.1-201ENST00000428222 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
AC004835.1-201ENST00000428222 SIN3AQ96ST3 1273 aa24.6■■□□□ 1.53
AC004835.1-201ENST00000428222 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
AC004835.1-201ENST00000428222 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
AC004835.1-201ENST00000428222 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
AC004835.1-201ENST00000428222 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
AC004835.1-201ENST00000428222 RAB3GAP2Q9H2M9 1393 aa24.51■■□□□ 1.51
AC004835.1-201ENST00000428222 IGF1RP08069 1367 aa24.5■■□□□ 1.51
AC004835.1-201ENST00000428222 DDX10Q13206 875 aaKnown RBP24.48■■□□□ 1.51
AC004835.1-201ENST00000428222 CFTRP13569 1480 aa24.47■■□□□ 1.51
AC004835.1-201ENST00000428222 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
AC004835.1-201ENST00000428222 BCANQ96GW7 911 aa24.46■■□□□ 1.51
AC004835.1-201ENST00000428222 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
AC004835.1-201ENST00000428222 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
AC004835.1-201ENST00000428222 PHLDB1Q86UU1 1377 aa24.39■■□□□ 1.5
AC004835.1-201ENST00000428222 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms