RNA–Protein interactions for RNA: ENST00000639555.1

NPAS4-204, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 5 BASIC

Gene NPAS4, Length 878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-204ENST00000639555 NISCHQ9Y2I1 1504 aa41.58■■■■■ 4.25
NPAS4-204ENST00000639555 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
NPAS4-204ENST00000639555 ABCC9O60706 1549 aa35.9■■■■□ 3.34
NPAS4-204ENST00000639555 DCAF8L2P0C7V8 631 aa34.93■■■■□ 3.18
NPAS4-204ENST00000639555 NACADO15069 1562 aa34.66■■■■□ 3.14
NPAS4-204ENST00000639555 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
NPAS4-204ENST00000639555 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
NPAS4-204ENST00000639555 MYO15BQ96JP2 1530 aa34.52■■■■□ 3.12
NPAS4-204ENST00000639555 DCAF1Q9Y4B6 1507 aa34.43■■■■□ 3.1
NPAS4-204ENST00000639555 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
NPAS4-204ENST00000639555 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
NPAS4-204ENST00000639555 SCRIBQ14160 1630 aa33.6■■■□□ 2.97
NPAS4-204ENST00000639555 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
NPAS4-204ENST00000639555 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
NPAS4-204ENST00000639555 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
NPAS4-204ENST00000639555 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
NPAS4-204ENST00000639555 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
NPAS4-204ENST00000639555 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.76
NPAS4-204ENST00000639555 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
NPAS4-204ENST00000639555 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
NPAS4-204ENST00000639555 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
NPAS4-204ENST00000639555 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
NPAS4-204ENST00000639555 NCAPD3P42695 1498 aa32■■■□□ 2.71
NPAS4-204ENST00000639555 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
NPAS4-204ENST00000639555 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
NPAS4-204ENST00000639555 BAZ1BQ9UIG0 1483 aaKnown RBP31.79■■■□□ 2.68
NPAS4-204ENST00000639555 HMGXB3Q12766 1538 aa31.79■■■□□ 2.68
NPAS4-204ENST00000639555 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
NPAS4-204ENST00000639555 WIZO95785 1651 aa31.61■■■□□ 2.65
NPAS4-204ENST00000639555 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
NPAS4-204ENST00000639555 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
NPAS4-204ENST00000639555 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
NPAS4-204ENST00000639555 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
NPAS4-204ENST00000639555 NESP48681 1621 aa31.06■■■□□ 2.56
NPAS4-204ENST00000639555 CCDC88BA6NC98 1476 aa31.04■■■□□ 2.56
NPAS4-204ENST00000639555 ERCC6Q03468 1493 aa31.03■■■□□ 2.56
NPAS4-204ENST00000639555 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
NPAS4-204ENST00000639555 CFTRP13569 1480 aa30.92■■■□□ 2.54
NPAS4-204ENST00000639555 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
NPAS4-204ENST00000639555 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
NPAS4-204ENST00000639555 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
NPAS4-204ENST00000639555 CUX2O14529 1486 aa30.58■■■□□ 2.49
NPAS4-204ENST00000639555 MRC2Q9UBG0 1479 aa30.56■■■□□ 2.48
NPAS4-204ENST00000639555 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
NPAS4-204ENST00000639555 THOC2Q8NI27 1593 aaKnown RBP30.47■■■□□ 2.47
NPAS4-204ENST00000639555 WDR62O43379 1518 aa30.38■■■□□ 2.45
NPAS4-204ENST00000639555 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
NPAS4-204ENST00000639555 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
NPAS4-204ENST00000639555 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
NPAS4-204ENST00000639555 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
NPAS4-204ENST00000639555 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
NPAS4-204ENST00000639555 WRNQ14191 1432 aaPredicted RBP eCLIP30.01■■■□□ 2.39
NPAS4-204ENST00000639555 CUX1P39880 1505 aa30■■■□□ 2.39
NPAS4-204ENST00000639555 POLA1P09884 1462 aaPredicted RBP29.96■■■□□ 2.39
NPAS4-204ENST00000639555 SOGA1O94964 1423 aa29.96■■■□□ 2.39
NPAS4-204ENST00000639555 FGD5Q6ZNL6 1462 aa29.92■■■□□ 2.38
NPAS4-204ENST00000639555 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
NPAS4-204ENST00000639555 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
NPAS4-204ENST00000639555 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
NPAS4-204ENST00000639555 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
NPAS4-204ENST00000639555 BIVM-ERCC5R4GMW8 1640 aa29.76■■■□□ 2.35
NPAS4-204ENST00000639555 SYNJ1O43426 1573 aa29.76■■■□□ 2.35
NPAS4-204ENST00000639555 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
NPAS4-204ENST00000639555 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.35
NPAS4-204ENST00000639555 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
NPAS4-204ENST00000639555 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
NPAS4-204ENST00000639555 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
NPAS4-204ENST00000639555 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
NPAS4-204ENST00000639555 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
NPAS4-204ENST00000639555 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
NPAS4-204ENST00000639555 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
NPAS4-204ENST00000639555 FBLN2P98095 1184 aa29.5■■■□□ 2.31
NPAS4-204ENST00000639555 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
NPAS4-204ENST00000639555 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
NPAS4-204ENST00000639555 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
NPAS4-204ENST00000639555 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
NPAS4-204ENST00000639555 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
NPAS4-204ENST00000639555 SNAPC4Q5SXM2 1469 aa29.41■■■□□ 2.3
NPAS4-204ENST00000639555 ERICH3Q5RHP9 1530 aa29.32■■■□□ 2.28
NPAS4-204ENST00000639555 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
NPAS4-204ENST00000639555 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
NPAS4-204ENST00000639555 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
NPAS4-204ENST00000639555 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
NPAS4-204ENST00000639555 IGF1RP08069 1367 aa29.25■■■□□ 2.27
NPAS4-204ENST00000639555 CHD1O14646 1710 aa29.17■■■□□ 2.26
NPAS4-204ENST00000639555 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
NPAS4-204ENST00000639555 CARMIL1Q5VZK9 1371 aa29.12■■■□□ 2.25
NPAS4-204ENST00000639555 GRIN2AQ12879 1464 aa29.11■■■□□ 2.25
NPAS4-204ENST00000639555 CUL7Q14999 1698 aa29.05■■■□□ 2.24
NPAS4-204ENST00000639555 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
NPAS4-204ENST00000639555 EEA1Q15075 1411 aa29.02■■■□□ 2.24
NPAS4-204ENST00000639555 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
NPAS4-204ENST00000639555 NUP160Q12769 1436 aa28.96■■■□□ 2.23
NPAS4-204ENST00000639555 RAPGEF2Q9Y4G8 1499 aa28.92■■■□□ 2.22
NPAS4-204ENST00000639555 CLASP1Q7Z460 1538 aa28.9■■■□□ 2.22
NPAS4-204ENST00000639555 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
NPAS4-204ENST00000639555 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
NPAS4-204ENST00000639555 JPH4Q96JJ6 628 aa28.85■■■□□ 2.21
NPAS4-204ENST00000639555 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
NPAS4-204ENST00000639555 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms