RNA–Protein interactions for RNA: ENST00000259608.7

SIT1-201, Transcript of signaling threshold regulating transmembrane adaptor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIT1, Length 1,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1-201ENST00000259608 NISCHQ9Y2I1 1504 aa43.53■■■■■ 4.56
SIT1-201ENST00000259608 CCDC180Q9P1Z9 1646 aa39.02■■■■□ 3.84
SIT1-201ENST00000259608 ABCC9O60706 1549 aa38.52■■■■□ 3.76
SIT1-201ENST00000259608 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
SIT1-201ENST00000259608 DNAJC5BQ9UF47 199 aa36.88■■■■□ 3.49
SIT1-201ENST00000259608 NACADO15069 1562 aa36.81■■■■□ 3.48
SIT1-201ENST00000259608 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
SIT1-201ENST00000259608 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
SIT1-201ENST00000259608 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
SIT1-201ENST00000259608 DCAF1Q9Y4B6 1507 aa36.13■■■■□ 3.37
SIT1-201ENST00000259608 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
SIT1-201ENST00000259608 BICRAQ9NZM4 1560 aa35.88■■■■□ 3.33
SIT1-201ENST00000259608 PABPN1Q86U42 306 aaKnown RBP eCLIP35.83■■■■□ 3.33
SIT1-201ENST00000259608 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
SIT1-201ENST00000259608 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
SIT1-201ENST00000259608 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
SIT1-201ENST00000259608 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
SIT1-201ENST00000259608 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
SIT1-201ENST00000259608 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
SIT1-201ENST00000259608 NCAPD3P42695 1498 aa33.99■■■■□ 3.03
SIT1-201ENST00000259608 SMARCA4P51532 1647 aa33.88■■■■□ 3.01
SIT1-201ENST00000259608 ATAD2BQ9ULI0 1458 aa33.86■■■■□ 3.01
SIT1-201ENST00000259608 SMARCA2P51531 1590 aa33.8■■■■□ 3
SIT1-201ENST00000259608 BAZ1AQ9NRL2 1556 aaPredicted RBP33.78■■■■□ 3
SIT1-201ENST00000259608 HMGXB3Q12766 1538 aa33.76■■■■□ 3
SIT1-201ENST00000259608 CUX2O14529 1486 aa33.71■■■□□ 2.99
SIT1-201ENST00000259608 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
SIT1-201ENST00000259608 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
SIT1-201ENST00000259608 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
SIT1-201ENST00000259608 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
SIT1-201ENST00000259608 NESP48681 1621 aa33.18■■■□□ 2.9
SIT1-201ENST00000259608 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
SIT1-201ENST00000259608 WIZO95785 1651 aa33.07■■■□□ 2.89
SIT1-201ENST00000259608 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
SIT1-201ENST00000259608 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
SIT1-201ENST00000259608 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
SIT1-201ENST00000259608 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
SIT1-201ENST00000259608 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
SIT1-201ENST00000259608 TOP2AP11388 1531 aaKnown RBP32.79■■■□□ 2.84
SIT1-201ENST00000259608 CFTRP13569 1480 aa32.62■■■□□ 2.81
SIT1-201ENST00000259608 TRIM41Q8WV44 630 aa32.58■■■□□ 2.81
SIT1-201ENST00000259608 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
SIT1-201ENST00000259608 WDR62O43379 1518 aa32.55■■■□□ 2.8
SIT1-201ENST00000259608 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
SIT1-201ENST00000259608 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
SIT1-201ENST00000259608 PRDM2Q13029 1718 aa32.35■■■□□ 2.77
SIT1-201ENST00000259608 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
SIT1-201ENST00000259608 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
SIT1-201ENST00000259608 OSCARQ8IYS5 282 aa31.97■■■□□ 2.71
SIT1-201ENST00000259608 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
SIT1-201ENST00000259608 TOPBP1Q92547 1522 aa31.91■■■□□ 2.7
SIT1-201ENST00000259608 IFT140Q96RY7 1462 aa31.87■■■□□ 2.69
SIT1-201ENST00000259608 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
SIT1-201ENST00000259608 DNMBPQ6XZF7 1577 aa31.84■■■□□ 2.69
SIT1-201ENST00000259608 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
SIT1-201ENST00000259608 TARBP1Q13395 1621 aaKnown RBP31.66■■■□□ 2.66
SIT1-201ENST00000259608 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
SIT1-201ENST00000259608 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
SIT1-201ENST00000259608 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
SIT1-201ENST00000259608 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
SIT1-201ENST00000259608 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
SIT1-201ENST00000259608 WDR97A6NE52 1622 aa31.46■■■□□ 2.63
SIT1-201ENST00000259608 CUX1P39880 1505 aa31.44■■■□□ 2.62
SIT1-201ENST00000259608 AQRO60306 1485 aaKnown RBP eCLIP31.44■■■□□ 2.62
SIT1-201ENST00000259608 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
SIT1-201ENST00000259608 SOGA1O94964 1423 aa31.42■■■□□ 2.62
SIT1-201ENST00000259608 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
SIT1-201ENST00000259608 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
SIT1-201ENST00000259608 CHD1O14646 1710 aa31.29■■■□□ 2.6
SIT1-201ENST00000259608 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
SIT1-201ENST00000259608 CYB5RLQ6IPT4 315 aa31.2■■■□□ 2.59
SIT1-201ENST00000259608 MAGI1Q96QZ7 1491 aaPredicted RBP31.18■■■□□ 2.58
SIT1-201ENST00000259608 GRIN2BQ13224 1484 aa31.16■■■□□ 2.58
SIT1-201ENST00000259608 ABCA10Q8WWZ4 1543 aa31.16■■■□□ 2.58
SIT1-201ENST00000259608 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
SIT1-201ENST00000259608 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.58
SIT1-201ENST00000259608 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
SIT1-201ENST00000259608 BIVM-ERCC5R4GMW8 1640 aa31.13■■■□□ 2.57
SIT1-201ENST00000259608 TRHP20396 242 aaPredicted RBP31.11■■■□□ 2.57
SIT1-201ENST00000259608 ABCA5Q8WWZ7 1642 aa31.08■■■□□ 2.57
SIT1-201ENST00000259608 GAPVD1Q14C86 1478 aa31.07■■■□□ 2.56
SIT1-201ENST00000259608 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
SIT1-201ENST00000259608 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
SIT1-201ENST00000259608 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
SIT1-201ENST00000259608 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
SIT1-201ENST00000259608 FBLN2P98095 1184 aa31.03■■■□□ 2.56
SIT1-201ENST00000259608 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
SIT1-201ENST00000259608 CHMP7Q8WUX9 453 aaPredicted RBP30.96■■■□□ 2.55
SIT1-201ENST00000259608 AEBP2Q6ZN18 517 aaPredicted RBP30.86■■■□□ 2.53
SIT1-201ENST00000259608 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
SIT1-201ENST00000259608 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
SIT1-201ENST00000259608 GRIN2AQ12879 1464 aa30.76■■■□□ 2.51
SIT1-201ENST00000259608 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
SIT1-201ENST00000259608 NUP160Q12769 1436 aa30.71■■■□□ 2.51
SIT1-201ENST00000259608 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
SIT1-201ENST00000259608 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
SIT1-201ENST00000259608 KIF27Q86VH2 1401 aa30.55■■■□□ 2.48
SIT1-201ENST00000259608 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
SIT1-201ENST00000259608 CUL7Q14999 1698 aa30.42■■■□□ 2.46
SIT1-201ENST00000259608 IGF1RP08069 1367 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 298.3 ms