RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 NISCHQ9Y2I1 1504 aa45.37■■■■■ 4.85
IFT27-201ENST00000340630 ABCC9O60706 1549 aa41.19■■■■■ 4.18
IFT27-201ENST00000340630 CCDC180Q9P1Z9 1646 aa40.72■■■■■ 4.11
IFT27-201ENST00000340630 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
IFT27-201ENST00000340630 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
IFT27-201ENST00000340630 NACADO15069 1562 aa38.65■■■■□ 3.78
IFT27-201ENST00000340630 DCAF8L2P0C7V8 631 aa38.64■■■■□ 3.78
IFT27-201ENST00000340630 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
IFT27-201ENST00000340630 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.67
IFT27-201ENST00000340630 MYO15BQ96JP2 1530 aa37.98■■■■□ 3.67
IFT27-201ENST00000340630 BICRAQ9NZM4 1560 aa37.86■■■■□ 3.65
IFT27-201ENST00000340630 ZCCHC6Q5VYS8 1495 aaKnown RBP37.52■■■■□ 3.6
IFT27-201ENST00000340630 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
IFT27-201ENST00000340630 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
IFT27-201ENST00000340630 SCRIBQ14160 1630 aa37.2■■■■□ 3.55
IFT27-201ENST00000340630 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
IFT27-201ENST00000340630 CECR2Q9BXF3 1484 aa37.12■■■■□ 3.53
IFT27-201ENST00000340630 EIF4G1Q04637 1599 aaKnown RBP36.97■■■■□ 3.51
IFT27-201ENST00000340630 DNAJC5Q9H3Z4 198 aa35.98■■■■□ 3.35
IFT27-201ENST00000340630 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
IFT27-201ENST00000340630 ERCC6Q03468 1493 aa35.59■■■■□ 3.29
IFT27-201ENST00000340630 ATAD2BQ9ULI0 1458 aa35.59■■■■□ 3.29
IFT27-201ENST00000340630 CUX2O14529 1486 aa35.55■■■■□ 3.28
IFT27-201ENST00000340630 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
IFT27-201ENST00000340630 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
IFT27-201ENST00000340630 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
IFT27-201ENST00000340630 NESP48681 1621 aa35.29■■■■□ 3.24
IFT27-201ENST00000340630 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
IFT27-201ENST00000340630 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
IFT27-201ENST00000340630 PEG3Q9GZU2 1588 aa35.04■■■■□ 3.2
IFT27-201ENST00000340630 MROH2BQ7Z745 1585 aa34.98■■■■□ 3.19
IFT27-201ENST00000340630 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
IFT27-201ENST00000340630 THOC2Q8NI27 1593 aaKnown RBP34.88■■■■□ 3.17
IFT27-201ENST00000340630 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
IFT27-201ENST00000340630 KIF21AQ7Z4S6 1674 aa34.72■■■■□ 3.15
IFT27-201ENST00000340630 CADPSQ9ULU8 1353 aa34.67■■■■□ 3.14
IFT27-201ENST00000340630 WIZO95785 1651 aa34.51■■■■□ 3.12
IFT27-201ENST00000340630 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
IFT27-201ENST00000340630 WDR62O43379 1518 aa34.37■■■■□ 3.09
IFT27-201ENST00000340630 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
IFT27-201ENST00000340630 CEP164Q9UPV0 1460 aa34.3■■■■□ 3.08
IFT27-201ENST00000340630 FANCD2Q9BXW9 1451 aa34.26■■■■□ 3.07
IFT27-201ENST00000340630 CFTRP13569 1480 aa34.17■■■■□ 3.06
IFT27-201ENST00000340630 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
IFT27-201ENST00000340630 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
IFT27-201ENST00000340630 OSCARQ8IYS5 282 aa34.01■■■■□ 3.03
IFT27-201ENST00000340630 URB2Q14146 1524 aaKnown RBP33.98■■■■□ 3.03
IFT27-201ENST00000340630 CCDC88BA6NC98 1476 aa33.73■■■□□ 2.99
IFT27-201ENST00000340630 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
IFT27-201ENST00000340630 IFT140Q96RY7 1462 aa33.63■■■□□ 2.97
IFT27-201ENST00000340630 PRDM2Q13029 1718 aa33.63■■■□□ 2.97
IFT27-201ENST00000340630 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
IFT27-201ENST00000340630 RIMBP3CA6NJZ7 1639 aa33.47■■■□□ 2.95
IFT27-201ENST00000340630 RIMBP3BA6NNM3 1639 aa33.47■■■□□ 2.95
IFT27-201ENST00000340630 RIMBP3Q9UFD9 1639 aa33.47■■■□□ 2.95
IFT27-201ENST00000340630 ABCC8Q09428 1581 aa33.45■■■□□ 2.95
IFT27-201ENST00000340630 DNMBPQ6XZF7 1577 aa33.37■■■□□ 2.93
IFT27-201ENST00000340630 ARHGEF11O15085 1522 aa33.36■■■□□ 2.93
IFT27-201ENST00000340630 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
IFT27-201ENST00000340630 AQRO60306 1485 aaKnown RBP eCLIP33.32■■■□□ 2.92
IFT27-201ENST00000340630 CYB5RLQ6IPT4 315 aa33.27■■■□□ 2.92
IFT27-201ENST00000340630 FBLN2P98095 1184 aa33.25■■■□□ 2.91
IFT27-201ENST00000340630 TARBP1Q13395 1621 aaKnown RBP33.23■■■□□ 2.91
IFT27-201ENST00000340630 POLA1P09884 1462 aaPredicted RBP33.2■■■□□ 2.91
IFT27-201ENST00000340630 RAD54L2Q9Y4B4 1467 aa33.13■■■□□ 2.89
IFT27-201ENST00000340630 CHD1O14646 1710 aa33.13■■■□□ 2.89
IFT27-201ENST00000340630 SOGA1O94964 1423 aa33.11■■■□□ 2.89
IFT27-201ENST00000340630 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
IFT27-201ENST00000340630 ARAP1Q96P48 1450 aa33.02■■■□□ 2.88
IFT27-201ENST00000340630 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
IFT27-201ENST00000340630 FGD5Q6ZNL6 1462 aa32.95■■■□□ 2.87
IFT27-201ENST00000340630 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
IFT27-201ENST00000340630 CHMP7Q8WUX9 453 aaPredicted RBP32.93■■■□□ 2.86
IFT27-201ENST00000340630 CUX1P39880 1505 aa32.87■■■□□ 2.85
IFT27-201ENST00000340630 WDR97A6NE52 1622 aa32.82■■■□□ 2.84
IFT27-201ENST00000340630 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
IFT27-201ENST00000340630 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
IFT27-201ENST00000340630 CLASP1Q7Z460 1538 aa32.78■■■□□ 2.84
IFT27-201ENST00000340630 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
IFT27-201ENST00000340630 SYNJ2O15056 1496 aa32.72■■■□□ 2.83
IFT27-201ENST00000340630 GAPVD1Q14C86 1478 aa32.66■■■□□ 2.82
IFT27-201ENST00000340630 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
IFT27-201ENST00000340630 PBRM1Q86U86 1689 aa32.54■■■□□ 2.8
IFT27-201ENST00000340630 ABCA10Q8WWZ4 1543 aa32.54■■■□□ 2.8
IFT27-201ENST00000340630 ABCA5Q8WWZ7 1642 aa32.47■■■□□ 2.79
IFT27-201ENST00000340630 WRNQ14191 1432 aaPredicted RBP eCLIP32.41■■■□□ 2.78
IFT27-201ENST00000340630 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
IFT27-201ENST00000340630 ERCC6L2Q5T890 1561 aa32.3■■■□□ 2.76
IFT27-201ENST00000340630 NUP160Q12769 1436 aa32.26■■■□□ 2.76
IFT27-201ENST00000340630 AEBP2Q6ZN18 517 aaPredicted RBP32.26■■■□□ 2.75
IFT27-201ENST00000340630 ADAMTS12P58397 1594 aa32.26■■■□□ 2.75
IFT27-201ENST00000340630 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
IFT27-201ENST00000340630 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
IFT27-201ENST00000340630 TOP2BQ02880 1626 aa32.22■■■□□ 2.75
IFT27-201ENST00000340630 BIVM-ERCC5R4GMW8 1640 aa32.19■■■□□ 2.74
IFT27-201ENST00000340630 ERICH3Q5RHP9 1530 aa32.11■■■□□ 2.73
IFT27-201ENST00000340630 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
IFT27-201ENST00000340630 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
IFT27-201ENST00000340630 PRG4Q92954 1404 aaPredicted RBP32.03■■■□□ 2.72
IFT27-201ENST00000340630 NPM1P06748 294 aaKnown RBP eCLIP31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms