Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 POFUT2-202ENST00000334538 3077 ntTSL 1 (best)12.28□□□□□ -0.444e-7■■■□□ 15.2
RPS3P23396 TMEM14B-211ENST00000473807 559 ntTSL 412.12□□□□□ -0.472e-7■■■□□ 15.2
RPS3P23396 POFUT2-204ENST00000451615 795 ntTSL 512.03□□□□□ -0.484e-7■■■□□ 15.2
RPS3P23396 POFUT2-208ENST00000471540 3176 ntTSL 511.8□□□□□ -0.524e-7■■■□□ 15.2
RPS3P23396 TMEM14B-205ENST00000463100 502 ntTSL 410.04□□□□□ -0.82e-7■■■□□ 15.2
RPS3P23396 PCSK6-208ENST00000559417 1035 ntTSL 517.5■□□□□ 0.394e-7■■■□□ 15.2
RPS3P23396 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.88■□□□□ 0.776e-7■■■□□ 15.2
RPS3P23396 PSMA5-205ENST00000491287 225 ntTSL 37.21□□□□□ -1.263e-9■■■□□ 15.2
RPS3P23396 CRLF1-202ENST00000593286 514 ntTSL 415.53■□□□□ 0.081e-24■■■□□ 15.2
RPS3P23396 NDRG1-221ENST00000522377 1103 ntTSL 511.77□□□□□ -0.538e-8■■■□□ 15.2
RPS3P23396 PARL-205ENST00000421484 1347 ntTSL 524.61■■□□□ 1.531e-8■■■□□ 15.2
RPS3P23396 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.371e-8■■■□□ 15.2
RPS3P23396 PARL-213ENST00000639900 1545 ntTSL 523.16■■□□□ 1.31e-8■■■□□ 15.2
RPS3P23396 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.56■■□□□ 1.044e-7■■■□□ 15.2
RPS3P23396 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.024e-7■■■□□ 15.2
RPS3P23396 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.27■□□□□ 0.841e-8■■■□□ 15.2
RPS3P23396 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.08■□□□□ 0.814e-7■■■□□ 15.2
RPS3P23396 PARL-211ENST00000638817 1534 ntTSL 519.57■□□□□ 0.721e-8■■■□□ 15.2
RPS3P23396 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.56■□□□□ 0.724e-7■■■□□ 15.2
RPS3P23396 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.34■□□□□ 0.691e-8■■■□□ 15.2
RPS3P23396 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.64e-7■■■□□ 15.2
RPS3P23396 UCHL5-203ENST00000367450 1355 ntTSL 518.7■□□□□ 0.584e-7■■■□□ 15.2
RPS3P23396 GTPBP4-201ENST00000360059 756 ntTSL 518.58■□□□□ 0.564e-7■■■□□ 15.2
RPS3P23396 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.2■□□□□ 0.54e-10■■■□□ 15.2
RPS3P23396 MFGE8-210ENST00000559259 611 ntTSL 218.01■□□□□ 0.474e-10■■■□□ 15.2
RPS3P23396 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.87■□□□□ 0.454e-10■■■□□ 15.2
RPS3P23396 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.344e-10■■■□□ 15.2
RPS3P23396 SUN1-235ENST00000497943 2824 ntTSL 217.03■□□□□ 0.324e-7■■■□□ 15.2
RPS3P23396 MFGE8-206ENST00000558029 849 ntTSL 317.02■□□□□ 0.324e-10■■■□□ 15.2
RPS3P23396 NDUFS7-211ENST00000539882 555 ntTSL 417.02■□□□□ 0.321e-8■■■□□ 15.2
RPS3P23396 MFGE8-207ENST00000558352 1031 ntTSL 216.97■□□□□ 0.314e-10■■■□□ 15.2
RPS3P23396 MFGE8-212ENST00000559997 531 ntTSL 516.97■□□□□ 0.314e-10■■■□□ 15.2
RPS3P23396 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.34e-7■■■□□ 15.2
RPS3P23396 MFGE8-205ENST00000558018 1989 ntTSL 216.79■□□□□ 0.284e-10■■■□□ 15.2
RPS3P23396 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.234e-7■■■□□ 15.2
RPS3P23396 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.221e-8■■■□□ 15.2
RPS3P23396 DNAJC19-207ENST00000485675 1630 ntTSL 216.01■□□□□ 0.154e-7■■■□□ 15.2
RPS3P23396 DDR1-231ENST00000417521 1479 ntTSL 515.88■□□□□ 0.134e-7■■■□□ 15.2
RPS3P23396 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.124e-10■■■□□ 15.2
RPS3P23396 DDR1-246ENST00000485023 515 ntTSL 315.79■□□□□ 0.124e-7■■■□□ 15.2
RPS3P23396 SUN1-222ENST00000457861 2975 ntTSL 215.34■□□□□ 0.054e-7■■■□□ 15.2
RPS3P23396 G3BP1-209ENST00000520578 530 ntTSL 315.28■□□□□ 0.041e-11■■■□□ 15.2
RPS3P23396 DNAJC19-203ENST00000472504 819 ntTSL 215.17■□□□□ 0.024e-7■■■□□ 15.2
RPS3P23396 DDR1-264ENST00000508472 836 ntTSL 415.06■□□□□ 04e-7■■■□□ 15.2
RPS3P23396 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.034e-7■■■□□ 15.2
RPS3P23396 DNAJC19-206ENST00000482363 1133 ntTSL 214.83□□□□□ -0.044e-7■■■□□ 15.2
RPS3P23396 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)14.77□□□□□ -0.047e-13■■■□□ 15.2
RPS3P23396 DNAJC19-204ENST00000478723 935 ntTSL 214.77□□□□□ -0.054e-7■■■□□ 15.2
RPS3P23396 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.75□□□□□ -0.054e-7■■■□□ 15.2
RPS3P23396 DNAJC19-202ENST00000469657 1239 ntTSL 214.57□□□□□ -0.084e-7■■■□□ 15.2
RPS3P23396 UCHL5-208ENST00000417752 577 ntTSL 514.43□□□□□ -0.14e-7■■■□□ 15.2
RPS3P23396 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.43□□□□□ -0.14e-7■■■□□ 15.2
RPS3P23396 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.154e-7■■■□□ 15.2
RPS3P23396 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.91□□□□□ -0.187e-13■■■□□ 15.2
RPS3P23396 RBM22-206ENST00000521464 731 ntTSL 413.76□□□□□ -0.211e-8■■■□□ 15.2
RPS3P23396 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.334e-7■■■□□ 15.2
RPS3P23396 DDR1-260ENST00000507533 545 ntTSL 212.92□□□□□ -0.344e-7■■■□□ 15.2
RPS3P23396 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.47e-13■■■□□ 15.2
RPS3P23396 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.414e-7■■■□□ 15.2
RPS3P23396 MFGE8-211ENST00000559770 680 ntTSL 212.45□□□□□ -0.424e-10■■■□□ 15.2
RPS3P23396 PPP2R1A-207ENST00000473455 615 ntTSL 312.4□□□□□ -0.421e-8■■■□□ 15.2
RPS3P23396 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.36□□□□□ -0.434e-7■■■□□ 15.2
RPS3P23396 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.444e-7■■■□□ 15.2
RPS3P23396 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.54e-7■■■□□ 15.2
RPS3P23396 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.9□□□□□ -0.54e-7■■■□□ 15.2
RPS3P23396 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.544e-7■■■□□ 15.2
RPS3P23396 PARL-209ENST00000469056 579 ntTSL 311.6□□□□□ -0.551e-8■■■□□ 15.2
RPS3P23396 SUN1-213ENST00000433212 3474 ntTSL 511.39□□□□□ -0.594e-7■■■□□ 15.2
RPS3P23396 NDUFA5-206ENST00000470123 459 ntTSL 210.94□□□□□ -0.664e-10■■■□□ 15.2
RPS3P23396 SUN1-206ENST00000413171 4488 ntTSL 510.92□□□□□ -0.663e-7■■■□□ 15.2
RPS3P23396 SUN1-212ENST00000429178 3701 ntTSL 1 (best)10.53□□□□□ -0.723e-7■■■□□ 15.2
RPS3P23396 RBM22-207ENST00000521594 566 ntTSL 410.34□□□□□ -0.751e-8■■■□□ 15.2
RPS3P23396 G3BP1-206ENST00000519832 1173 ntTSL 1 (best)10.28□□□□□ -0.761e-11■■■□□ 15.2
RPS3P23396 UCHL5-210ENST00000421683 834 ntTSL 310.04□□□□□ -0.84e-7■■■□□ 15.2
RPS3P23396 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.833e-7■■■□□ 15.2
RPS3P23396 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.844e-7■■■□□ 15.2
RPS3P23396 GTPBP4-205ENST00000491635 2220 ntTSL 29.67□□□□□ -0.864e-7■■■□□ 15.2
RPS3P23396 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.93e-7■■■□□ 15.2
RPS3P23396 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.38□□□□□ -0.913e-7■■■□□ 15.2
RPS3P23396 PARL-212ENST00000639100 1513 ntTSL 5 BASIC9.38□□□□□ -0.911e-8■■■□□ 15.2
RPS3P23396 PPP2R1A-211ENST00000495876 562 ntTSL 49.28□□□□□ -0.926e-12■■■□□ 15.2
RPS3P23396 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.19□□□□□ -0.943e-7■■■□□ 15.2
RPS3P23396 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.963e-7■■■□□ 15.2
RPS3P23396 SUN1-229ENST00000475971 4038 ntTSL 1 (best)8.53□□□□□ -1.044e-7■■■□□ 15.2
RPS3P23396 COX7A2L-206ENST00000468711 516 ntTSL 38.51□□□□□ -1.051e-11■■■□□ 15.2
RPS3P23396 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.114e-7■■■□□ 15.2
RPS3P23396 PSMC6-206ENST00000554044 844 ntTSL 57.06□□□□□ -1.289e-7■■■□□ 15.2
RPS3P23396 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.314e-7■■■□□ 15.2
RPS3P23396 PSMC6-202ENST00000458604 1093 ntTSL 26.64□□□□□ -1.359e-7■■■□□ 15.2
RPS3P23396 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.62□□□□□ -1.357e-13■■■□□ 15.2
RPS3P23396 RBM22-203ENST00000518917 566 ntTSL 56.58□□□□□ -1.361e-8■■■□□ 15.2
RPS3P23396 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.429e-7■■■□□ 15.2
RPS3P23396 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.429e-7■■■□□ 15.2
RPS3P23396 RBM22-205ENST00000521248 660 ntTSL 26.02□□□□□ -1.451e-8■■■□□ 15.2
RPS3P23396 CTPS1-204ENST00000463423 457 ntTSL 56□□□□□ -1.454e-7■■■□□ 15.2
RPS3P23396 PDCD6IP-211ENST00000482561 626 ntTSL 55.49□□□□□ -1.534e-18■■■□□ 15.2
RPS3P23396 UCHL5-213ENST00000483156 417 ntTSL 25.43□□□□□ -1.544e-7■■■□□ 15.2
RPS3P23396 CTPS1-205ENST00000464283 643 ntTSL 55.27□□□□□ -1.574e-7■■■□□ 15.2
RPS3P23396 PSMC6-212ENST00000556813 785 ntTSL 55.24□□□□□ -1.579e-7■■■□□ 15.2
RPS3P23396 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.629e-7■■■□□ 15.2
Retrieved 100 of 24,271 protein–RNA pairs in 271.2 ms