RNA–Protein interactions for RNA: ENST00000497943.1

SUN1-235, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 2

Gene SUN1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-235ENST00000497943 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
SUN1-235ENST00000497943 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
SUN1-235ENST00000497943 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
SUN1-235ENST00000497943 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
SUN1-235ENST00000497943 CCDC180Q9P1Z9 1646 aa30.52■■■□□ 2.48
SUN1-235ENST00000497943 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
SUN1-235ENST00000497943 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
SUN1-235ENST00000497943 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
SUN1-235ENST00000497943 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
SUN1-235ENST00000497943 SCRIBQ14160 1630 aa28.9■■■□□ 2.22
SUN1-235ENST00000497943 LOC105371045A0A1W2PR82 267 aa28.86■■■□□ 2.21
SUN1-235ENST00000497943 ABCC9O60706 1549 aa28.78■■■□□ 2.2
SUN1-235ENST00000497943 PCGF6Q9BYE7 350 aa28.72■■■□□ 2.19
SUN1-235ENST00000497943 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.18
SUN1-235ENST00000497943 HRCP23327 699 aa28.58■■■□□ 2.17
SUN1-235ENST00000497943 CECR2Q9BXF3 1484 aa28.38■■■□□ 2.13
SUN1-235ENST00000497943 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
SUN1-235ENST00000497943 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
SUN1-235ENST00000497943 NACADO15069 1562 aa28.31■■■□□ 2.12
SUN1-235ENST00000497943 FAM9AQ8IZU1 332 aaPredicted RBP28.27■■■□□ 2.12
SUN1-235ENST00000497943 PPARGC1BQ86YN6 1023 aaKnown RBP28.24■■■□□ 2.11
SUN1-235ENST00000497943 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
SUN1-235ENST00000497943 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
SUN1-235ENST00000497943 WIZO95785 1651 aa28.04■■■□□ 2.08
SUN1-235ENST00000497943 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.08
SUN1-235ENST00000497943 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SUN1-235ENST00000497943 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 21e-12■■■■□ 22.2
SUN1-235ENST00000497943 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
SUN1-235ENST00000497943 UNC13AQ9UPW8 1703 aa27.52■■■□□ 2
SUN1-235ENST00000497943 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
SUN1-235ENST00000497943 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
SUN1-235ENST00000497943 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
SUN1-235ENST00000497943 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
SUN1-235ENST00000497943 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
SUN1-235ENST00000497943 SOGA1O94964 1423 aa27.25■■□□□ 1.95
SUN1-235ENST00000497943 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
SUN1-235ENST00000497943 ZEB1P37275 1124 aaPredicted RBP27.24■■□□□ 1.95
SUN1-235ENST00000497943 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.95
SUN1-235ENST00000497943 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
SUN1-235ENST00000497943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
SUN1-235ENST00000497943 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
SUN1-235ENST00000497943 CEP162Q5TB80 1403 aa27.02■■□□□ 1.92
SUN1-235ENST00000497943 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
SUN1-235ENST00000497943 TNIKQ9UKE5 1360 aa26.93■■□□□ 1.9
SUN1-235ENST00000497943 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
SUN1-235ENST00000497943 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
SUN1-235ENST00000497943 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
SUN1-235ENST00000497943 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
SUN1-235ENST00000497943 EEA1Q15075 1411 aa26.81■■□□□ 1.88
SUN1-235ENST00000497943 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
SUN1-235ENST00000497943 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SUN1-235ENST00000497943 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
SUN1-235ENST00000497943 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
SUN1-235ENST00000497943 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.84
SUN1-235ENST00000497943 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
SUN1-235ENST00000497943 CLIP1P30622 1438 aa26.51■■□□□ 1.84
SUN1-235ENST00000497943 KIF21BO75037 1637 aa26.48■■□□□ 1.83
SUN1-235ENST00000497943 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
SUN1-235ENST00000497943 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
SUN1-235ENST00000497943 TOP2BQ02880 1626 aa26.37■■□□□ 1.81
SUN1-235ENST00000497943 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
SUN1-235ENST00000497943 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
SUN1-235ENST00000497943 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
SUN1-235ENST00000497943 APLP2Q06481 763 aa26.29■■□□□ 1.8
SUN1-235ENST00000497943 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
SUN1-235ENST00000497943 CUX1P39880 1505 aa26.23■■□□□ 1.79
SUN1-235ENST00000497943 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
SUN1-235ENST00000497943 PRXQ9BXM0 1461 aa26.18■■□□□ 1.78
SUN1-235ENST00000497943 NEUROD1Q13562 356 aa26.16■■□□□ 1.78
SUN1-235ENST00000497943 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
SUN1-235ENST00000497943 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
SUN1-235ENST00000497943 CFTRP13569 1480 aa26.1■■□□□ 1.77
SUN1-235ENST00000497943 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
SUN1-235ENST00000497943 ACIN1Q9UKV3 1341 aaKnown RBP26.08■■□□□ 1.77
SUN1-235ENST00000497943 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
SUN1-235ENST00000497943 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
SUN1-235ENST00000497943 CUX2O14529 1486 aa25.89■■□□□ 1.73
SUN1-235ENST00000497943 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
SUN1-235ENST00000497943 IGF1RP08069 1367 aa25.88■■□□□ 1.73
SUN1-235ENST00000497943 MIER1Q8N108 512 aa25.87■■□□□ 1.73
SUN1-235ENST00000497943 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
SUN1-235ENST00000497943 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
SUN1-235ENST00000497943 GTF3C3Q9Y5Q9 886 aa25.86■■□□□ 1.73
SUN1-235ENST00000497943 CENPBP07199 599 aaPredicted RBP25.83■■□□□ 1.72
SUN1-235ENST00000497943 ITGAEP38570 1179 aa25.83■■□□□ 1.72
SUN1-235ENST00000497943 DHX57Q6P158 1386 aaKnown RBP25.8■■□□□ 1.72
SUN1-235ENST00000497943 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
SUN1-235ENST00000497943 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
SUN1-235ENST00000497943 P3H3Q8IVL6 736 aa25.73■■□□□ 1.71
SUN1-235ENST00000497943 RRBP1Q9P2E9 1410 aaKnown RBP25.72■■□□□ 1.71
SUN1-235ENST00000497943 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
SUN1-235ENST00000497943 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
SUN1-235ENST00000497943 PRDM2Q13029 1718 aa25.67■■□□□ 1.7
SUN1-235ENST00000497943 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
SUN1-235ENST00000497943 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
SUN1-235ENST00000497943 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
SUN1-235ENST00000497943 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.69
SUN1-235ENST00000497943 NESP48681 1621 aa25.58■■□□□ 1.69
SUN1-235ENST00000497943 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
SUN1-235ENST00000497943 PHLDB1Q86UU1 1377 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms