RNA–Protein interactions for RNA: ENST00000519832.1

G3BP1-206, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 1,173 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-206ENST00000519832 AEBP2Q6ZN18 517 aaPredicted RBP31.6■■■□□ 2.65
G3BP1-206ENST00000519832 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
G3BP1-206ENST00000519832 SENP3Q9H4L4 574 aaPredicted RBP26.73■■□□□ 1.87
G3BP1-206ENST00000519832 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
G3BP1-206ENST00000519832 FOXD1Q16676 465 aa25.11■■□□□ 1.61
G3BP1-206ENST00000519832 POTEDQ86YR6 584 aa24.19■■□□□ 1.46
G3BP1-206ENST00000519832 NISCHQ9Y2I1 1504 aa23.66■■□□□ 1.38
G3BP1-206ENST00000519832 PLPPR3Q6T4P5 718 aa23.55■■□□□ 1.36
G3BP1-206ENST00000519832 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
G3BP1-206ENST00000519832 MSH5O43196 834 aa23.36■■□□□ 1.33
G3BP1-206ENST00000519832 PIAS4Q8N2W9 510 aaPredicted RBP23.36■■□□□ 1.33
G3BP1-206ENST00000519832 ADRA2BP18089 450 aa23.33■■□□□ 1.33
G3BP1-206ENST00000519832 MAPK8IP2Q13387 824 aaPredicted RBP21.53■■□□□ 1.04
G3BP1-206ENST00000519832 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
G3BP1-206ENST00000519832 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
G3BP1-206ENST00000519832 ABCC9O60706 1549 aa21.18■□□□□ 0.98
G3BP1-206ENST00000519832 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
G3BP1-206ENST00000519832 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
G3BP1-206ENST00000519832 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
G3BP1-206ENST00000519832 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
G3BP1-206ENST00000519832 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
G3BP1-206ENST00000519832 CACNB1Q02641 598 aaPredicted RBP20.25■□□□□ 0.83
G3BP1-206ENST00000519832 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
G3BP1-206ENST00000519832 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
G3BP1-206ENST00000519832 NACADO15069 1562 aa20.08■□□□□ 0.8
G3BP1-206ENST00000519832 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
G3BP1-206ENST00000519832 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.77
G3BP1-206ENST00000519832 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
G3BP1-206ENST00000519832 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
G3BP1-206ENST00000519832 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
G3BP1-206ENST00000519832 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
G3BP1-206ENST00000519832 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
G3BP1-206ENST00000519832 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
G3BP1-206ENST00000519832 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
G3BP1-206ENST00000519832 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
G3BP1-206ENST00000519832 NPM3O75607 178 aaKnown RBP19.61■□□□□ 0.73
G3BP1-206ENST00000519832 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
G3BP1-206ENST00000519832 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
G3BP1-206ENST00000519832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.41■□□□□ 0.73e-7■■■□□ 15.7
G3BP1-206ENST00000519832 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
G3BP1-206ENST00000519832 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
G3BP1-206ENST00000519832 KCNA4P22459 653 aa19.15■□□□□ 0.66
G3BP1-206ENST00000519832 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
G3BP1-206ENST00000519832 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
G3BP1-206ENST00000519832 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
G3BP1-206ENST00000519832 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
G3BP1-206ENST00000519832 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
G3BP1-206ENST00000519832 CAPN15O75808 1086 aa18.77■□□□□ 0.6
G3BP1-206ENST00000519832 DSG3P32926 999 aa18.72■□□□□ 0.59
G3BP1-206ENST00000519832 POTEHQ6S545 545 aa18.7■□□□□ 0.58
G3BP1-206ENST00000519832 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
G3BP1-206ENST00000519832 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
G3BP1-206ENST00000519832 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
G3BP1-206ENST00000519832 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
G3BP1-206ENST00000519832 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
G3BP1-206ENST00000519832 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
G3BP1-206ENST00000519832 ABCB7O75027 752 aa18.43■□□□□ 0.54
G3BP1-206ENST00000519832 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
G3BP1-206ENST00000519832 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
G3BP1-206ENST00000519832 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
G3BP1-206ENST00000519832 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
G3BP1-206ENST00000519832 CUX2O14529 1486 aa18.27■□□□□ 0.52
G3BP1-206ENST00000519832 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
G3BP1-206ENST00000519832 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
G3BP1-206ENST00000519832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
G3BP1-206ENST00000519832 APLP2Q06481 763 aa18.2■□□□□ 0.5
G3BP1-206ENST00000519832 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
G3BP1-206ENST00000519832 NESP48681 1621 aa18.2■□□□□ 0.5
G3BP1-206ENST00000519832 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
G3BP1-206ENST00000519832 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
G3BP1-206ENST00000519832 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
G3BP1-206ENST00000519832 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
G3BP1-206ENST00000519832 WIZO95785 1651 aa18.03■□□□□ 0.48
G3BP1-206ENST00000519832 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
G3BP1-206ENST00000519832 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
G3BP1-206ENST00000519832 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
G3BP1-206ENST00000519832 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
G3BP1-206ENST00000519832 POLA2Q14181 598 aa17.92■□□□□ 0.46
G3BP1-206ENST00000519832 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
G3BP1-206ENST00000519832 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
G3BP1-206ENST00000519832 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
G3BP1-206ENST00000519832 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
G3BP1-206ENST00000519832 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
G3BP1-206ENST00000519832 WDR62O43379 1518 aa17.82■□□□□ 0.44
G3BP1-206ENST00000519832 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
G3BP1-206ENST00000519832 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
G3BP1-206ENST00000519832 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
G3BP1-206ENST00000519832 CFTRP13569 1480 aa17.75■□□□□ 0.43
G3BP1-206ENST00000519832 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
G3BP1-206ENST00000519832 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
G3BP1-206ENST00000519832 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
G3BP1-206ENST00000519832 ZBTB22O15209 634 aa17.67■□□□□ 0.42
G3BP1-206ENST00000519832 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
G3BP1-206ENST00000519832 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
G3BP1-206ENST00000519832 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
G3BP1-206ENST00000519832 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
G3BP1-206ENST00000519832 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
G3BP1-206ENST00000519832 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
G3BP1-206ENST00000519832 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
G3BP1-206ENST00000519832 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms