RNA–Protein interactions for RNA: ENST00000475971.5

SUN1-229, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 1 (best)

Gene SUN1, Length 4,038 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-229ENST00000475971 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
SUN1-229ENST00000475971 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
SUN1-229ENST00000475971 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
SUN1-229ENST00000475971 ABCC9O60706 1549 aa16.24■□□□□ 0.19
SUN1-229ENST00000475971 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
SUN1-229ENST00000475971 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
SUN1-229ENST00000475971 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
SUN1-229ENST00000475971 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■□□□ 13.2
SUN1-229ENST00000475971 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
SUN1-229ENST00000475971 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
SUN1-229ENST00000475971 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
SUN1-229ENST00000475971 NACADO15069 1562 aa15.23■□□□□ 0.03
SUN1-229ENST00000475971 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
SUN1-229ENST00000475971 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
SUN1-229ENST00000475971 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
SUN1-229ENST00000475971 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
SUN1-229ENST00000475971 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
SUN1-229ENST00000475971 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
SUN1-229ENST00000475971 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
SUN1-229ENST00000475971 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
SUN1-229ENST00000475971 BICRAQ9NZM4 1560 aa14.65□□□□□ -0.06
SUN1-229ENST00000475971 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
SUN1-229ENST00000475971 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
SUN1-229ENST00000475971 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.08
SUN1-229ENST00000475971 WIZO95785 1651 aa14.57□□□□□ -0.08
SUN1-229ENST00000475971 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
SUN1-229ENST00000475971 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
SUN1-229ENST00000475971 SMARCA4P51532 1647 aa14.46□□□□□ -0.09
SUN1-229ENST00000475971 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
SUN1-229ENST00000475971 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
SUN1-229ENST00000475971 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
SUN1-229ENST00000475971 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
SUN1-229ENST00000475971 MYT1Q01538 1121 aa14.38□□□□□ -0.11
SUN1-229ENST00000475971 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
SUN1-229ENST00000475971 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
SUN1-229ENST00000475971 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
SUN1-229ENST00000475971 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
SUN1-229ENST00000475971 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
SUN1-229ENST00000475971 TTBK1Q5TCY1 1321 aaPredicted RBP14.22□□□□□ -0.13
SUN1-229ENST00000475971 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
SUN1-229ENST00000475971 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
SUN1-229ENST00000475971 HRCP23327 699 aa14.13□□□□□ -0.15
SUN1-229ENST00000475971 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
SUN1-229ENST00000475971 NESP48681 1621 aa14.1□□□□□ -0.15
SUN1-229ENST00000475971 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
SUN1-229ENST00000475971 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
SUN1-229ENST00000475971 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
SUN1-229ENST00000475971 FBLN2P98095 1184 aa14.01□□□□□ -0.17
SUN1-229ENST00000475971 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
SUN1-229ENST00000475971 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
SUN1-229ENST00000475971 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
SUN1-229ENST00000475971 SOGA1O94964 1423 aa13.97□□□□□ -0.17
SUN1-229ENST00000475971 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
SUN1-229ENST00000475971 FANCD2Q9BXW9 1451 aa13.91□□□□□ -0.18
SUN1-229ENST00000475971 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
SUN1-229ENST00000475971 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
SUN1-229ENST00000475971 CFTRP13569 1480 aa13.87□□□□□ -0.19
SUN1-229ENST00000475971 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
SUN1-229ENST00000475971 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
SUN1-229ENST00000475971 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
SUN1-229ENST00000475971 CEP164Q9UPV0 1460 aa13.82□□□□□ -0.2
SUN1-229ENST00000475971 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
SUN1-229ENST00000475971 APLP2Q06481 763 aa13.81□□□□□ -0.2
SUN1-229ENST00000475971 CUX2O14529 1486 aa13.8□□□□□ -0.2
SUN1-229ENST00000475971 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
SUN1-229ENST00000475971 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
SUN1-229ENST00000475971 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
SUN1-229ENST00000475971 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
SUN1-229ENST00000475971 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
SUN1-229ENST00000475971 CUX1P39880 1505 aa13.72□□□□□ -0.21
SUN1-229ENST00000475971 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
SUN1-229ENST00000475971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
SUN1-229ENST00000475971 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
SUN1-229ENST00000475971 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.224e-7■■■■■ 27.1
SUN1-229ENST00000475971 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
SUN1-229ENST00000475971 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
SUN1-229ENST00000475971 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
SUN1-229ENST00000475971 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
SUN1-229ENST00000475971 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
SUN1-229ENST00000475971 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
SUN1-229ENST00000475971 ITGAEP38570 1179 aa13.6□□□□□ -0.23
SUN1-229ENST00000475971 EEA1Q15075 1411 aa13.58□□□□□ -0.24
SUN1-229ENST00000475971 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
SUN1-229ENST00000475971 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
SUN1-229ENST00000475971 IGF1RP08069 1367 aa13.57□□□□□ -0.24
SUN1-229ENST00000475971 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
SUN1-229ENST00000475971 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
SUN1-229ENST00000475971 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
SUN1-229ENST00000475971 CLIP1P30622 1438 aa13.54□□□□□ -0.24
SUN1-229ENST00000475971 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
SUN1-229ENST00000475971 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
SUN1-229ENST00000475971 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
SUN1-229ENST00000475971 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
SUN1-229ENST00000475971 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
SUN1-229ENST00000475971 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
SUN1-229ENST00000475971 TNIKQ9UKE5 1360 aa13.5□□□□□ -0.25
SUN1-229ENST00000475971 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
SUN1-229ENST00000475971 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
SUN1-229ENST00000475971 FAM50AQ14320 339 aaKnown RBP13.39□□□□□ -0.27
SUN1-229ENST00000475971 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms