RNA–Protein interactions for RNA: ENST00000522377.5

NDRG1-221, Transcript of N-myc downstream regulated 1, humanhuman

TSL 5

Gene NDRG1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-221ENST00000522377 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
NDRG1-221ENST00000522377 ABCC9O60706 1549 aa28.51■■■□□ 2.15
NDRG1-221ENST00000522377 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
NDRG1-221ENST00000522377 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
NDRG1-221ENST00000522377 NACADO15069 1562 aa26.86■■□□□ 1.89
NDRG1-221ENST00000522377 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
NDRG1-221ENST00000522377 DCAF8L2P0C7V8 631 aa26.6■■□□□ 1.85
NDRG1-221ENST00000522377 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
NDRG1-221ENST00000522377 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
NDRG1-221ENST00000522377 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
NDRG1-221ENST00000522377 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
NDRG1-221ENST00000522377 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
NDRG1-221ENST00000522377 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
NDRG1-221ENST00000522377 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
NDRG1-221ENST00000522377 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
NDRG1-221ENST00000522377 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
NDRG1-221ENST00000522377 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
NDRG1-221ENST00000522377 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
NDRG1-221ENST00000522377 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
NDRG1-221ENST00000522377 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
NDRG1-221ENST00000522377 CUX2O14529 1486 aa24.7■■□□□ 1.55
NDRG1-221ENST00000522377 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
NDRG1-221ENST00000522377 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
NDRG1-221ENST00000522377 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
NDRG1-221ENST00000522377 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
NDRG1-221ENST00000522377 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
NDRG1-221ENST00000522377 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
NDRG1-221ENST00000522377 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
NDRG1-221ENST00000522377 NESP48681 1621 aa24.42■■□□□ 1.5
NDRG1-221ENST00000522377 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
NDRG1-221ENST00000522377 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
NDRG1-221ENST00000522377 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
NDRG1-221ENST00000522377 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
NDRG1-221ENST00000522377 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
NDRG1-221ENST00000522377 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
NDRG1-221ENST00000522377 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
NDRG1-221ENST00000522377 WIZO95785 1651 aa23.94■■□□□ 1.42
NDRG1-221ENST00000522377 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
NDRG1-221ENST00000522377 WDR62O43379 1518 aa23.89■■□□□ 1.41
NDRG1-221ENST00000522377 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
NDRG1-221ENST00000522377 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
NDRG1-221ENST00000522377 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
NDRG1-221ENST00000522377 CFTRP13569 1480 aa23.68■■□□□ 1.38
NDRG1-221ENST00000522377 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
NDRG1-221ENST00000522377 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
NDRG1-221ENST00000522377 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
NDRG1-221ENST00000522377 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
NDRG1-221ENST00000522377 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
NDRG1-221ENST00000522377 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
NDRG1-221ENST00000522377 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
NDRG1-221ENST00000522377 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
NDRG1-221ENST00000522377 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
NDRG1-221ENST00000522377 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
NDRG1-221ENST00000522377 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
NDRG1-221ENST00000522377 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
NDRG1-221ENST00000522377 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
NDRG1-221ENST00000522377 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
NDRG1-221ENST00000522377 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
NDRG1-221ENST00000522377 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
NDRG1-221ENST00000522377 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
NDRG1-221ENST00000522377 CHD1O14646 1710 aa23.07■■□□□ 1.28
NDRG1-221ENST00000522377 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.282e-8■■■■■ 32.6
NDRG1-221ENST00000522377 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
NDRG1-221ENST00000522377 CYB5RLQ6IPT4 315 aa22.95■■□□□ 1.26
NDRG1-221ENST00000522377 FBLN2P98095 1184 aa22.93■■□□□ 1.26
NDRG1-221ENST00000522377 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
NDRG1-221ENST00000522377 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
NDRG1-221ENST00000522377 SOGA1O94964 1423 aa22.89■■□□□ 1.25
NDRG1-221ENST00000522377 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
NDRG1-221ENST00000522377 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
NDRG1-221ENST00000522377 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
NDRG1-221ENST00000522377 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
NDRG1-221ENST00000522377 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
NDRG1-221ENST00000522377 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
NDRG1-221ENST00000522377 CUX1P39880 1505 aa22.77■■□□□ 1.24
NDRG1-221ENST00000522377 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
NDRG1-221ENST00000522377 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
NDRG1-221ENST00000522377 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
NDRG1-221ENST00000522377 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
NDRG1-221ENST00000522377 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
NDRG1-221ENST00000522377 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
NDRG1-221ENST00000522377 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
NDRG1-221ENST00000522377 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
NDRG1-221ENST00000522377 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
NDRG1-221ENST00000522377 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
NDRG1-221ENST00000522377 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
NDRG1-221ENST00000522377 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
NDRG1-221ENST00000522377 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
NDRG1-221ENST00000522377 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
NDRG1-221ENST00000522377 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
NDRG1-221ENST00000522377 NUP160Q12769 1436 aa22.37■■□□□ 1.17
NDRG1-221ENST00000522377 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
NDRG1-221ENST00000522377 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
NDRG1-221ENST00000522377 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
NDRG1-221ENST00000522377 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
NDRG1-221ENST00000522377 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
NDRG1-221ENST00000522377 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
NDRG1-221ENST00000522377 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
NDRG1-221ENST00000522377 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
NDRG1-221ENST00000522377 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms