RNA–Protein interactions for RNA: ENST00000463423.5

CTPS1-204, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-204ENST00000463423 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
CTPS1-204ENST00000463423 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
CTPS1-204ENST00000463423 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
CTPS1-204ENST00000463423 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
CTPS1-204ENST00000463423 ABCC9O60706 1549 aa12.38□□□□□ -0.43
CTPS1-204ENST00000463423 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.46
CTPS1-204ENST00000463423 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
CTPS1-204ENST00000463423 DCAF1Q9Y4B6 1507 aa12.13□□□□□ -0.47
CTPS1-204ENST00000463423 NACADO15069 1562 aa12.12□□□□□ -0.47
CTPS1-204ENST00000463423 RB1CC1Q8TDY2 1594 aa12.07□□□□□ -0.48
CTPS1-204ENST00000463423 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
CTPS1-204ENST00000463423 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
CTPS1-204ENST00000463423 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-204ENST00000463423 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.53
CTPS1-204ENST00000463423 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CTPS1-204ENST00000463423 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
CTPS1-204ENST00000463423 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
CTPS1-204ENST00000463423 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
CTPS1-204ENST00000463423 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
CTPS1-204ENST00000463423 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
CTPS1-204ENST00000463423 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
CTPS1-204ENST00000463423 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
CTPS1-204ENST00000463423 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
CTPS1-204ENST00000463423 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
CTPS1-204ENST00000463423 SMARCA4P51532 1647 aa11.27□□□□□ -0.6
CTPS1-204ENST00000463423 PEG3Q9GZU2 1588 aa11.22□□□□□ -0.61
CTPS1-204ENST00000463423 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
CTPS1-204ENST00000463423 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
CTPS1-204ENST00000463423 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
CTPS1-204ENST00000463423 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
CTPS1-204ENST00000463423 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
CTPS1-204ENST00000463423 HMGXB3Q12766 1538 aa11.12□□□□□ -0.63
CTPS1-204ENST00000463423 WIZO95785 1651 aa11.11□□□□□ -0.63
CTPS1-204ENST00000463423 FOXD1Q16676 465 aa11.09□□□□□ -0.63
CTPS1-204ENST00000463423 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
CTPS1-204ENST00000463423 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
CTPS1-204ENST00000463423 SUPT5HO00267 1087 aaKnown RBP10.88□□□□□ -0.67
CTPS1-204ENST00000463423 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
CTPS1-204ENST00000463423 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
CTPS1-204ENST00000463423 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
CTPS1-204ENST00000463423 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
CTPS1-204ENST00000463423 CFTRP13569 1480 aa10.81□□□□□ -0.68
CTPS1-204ENST00000463423 NESP48681 1621 aa10.78□□□□□ -0.68
CTPS1-204ENST00000463423 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
CTPS1-204ENST00000463423 KIF21AQ7Z4S6 1674 aa10.72□□□□□ -0.69
CTPS1-204ENST00000463423 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
CTPS1-204ENST00000463423 ERCC6Q03468 1493 aa10.66□□□□□ -0.7
CTPS1-204ENST00000463423 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
CTPS1-204ENST00000463423 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
CTPS1-204ENST00000463423 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
CTPS1-204ENST00000463423 MRC2Q9UBG0 1479 aa10.6□□□□□ -0.71
CTPS1-204ENST00000463423 WDR62O43379 1518 aa10.59□□□□□ -0.71
CTPS1-204ENST00000463423 MSH5O43196 834 aa10.58□□□□□ -0.72
CTPS1-204ENST00000463423 CUX2O14529 1486 aa10.57□□□□□ -0.72
CTPS1-204ENST00000463423 URB2Q14146 1524 aaKnown RBP10.56□□□□□ -0.72
CTPS1-204ENST00000463423 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
CTPS1-204ENST00000463423 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
CTPS1-204ENST00000463423 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
CTPS1-204ENST00000463423 CUX1P39880 1505 aa10.5□□□□□ -0.73
CTPS1-204ENST00000463423 TOP2BQ02880 1626 aa10.49□□□□□ -0.73
CTPS1-204ENST00000463423 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
CTPS1-204ENST00000463423 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
CTPS1-204ENST00000463423 SYNJ1O43426 1573 aa10.44□□□□□ -0.74
CTPS1-204ENST00000463423 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
CTPS1-204ENST00000463423 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
CTPS1-204ENST00000463423 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
CTPS1-204ENST00000463423 SOGA1O94964 1423 aa10.41□□□□□ -0.74
CTPS1-204ENST00000463423 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
CTPS1-204ENST00000463423 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
CTPS1-204ENST00000463423 RAD54L2Q9Y4B4 1467 aa10.37□□□□□ -0.75
CTPS1-204ENST00000463423 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
CTPS1-204ENST00000463423 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
CTPS1-204ENST00000463423 EIF4G3O43432 1585 aaKnown RBP10.32□□□□□ -0.76
CTPS1-204ENST00000463423 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
CTPS1-204ENST00000463423 AQRO60306 1485 aaKnown RBP eCLIP10.3□□□□□ -0.763e-7■■■■■ 32.7
CTPS1-204ENST00000463423 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
CTPS1-204ENST00000463423 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
CTPS1-204ENST00000463423 GAPVD1Q14C86 1478 aa10.3□□□□□ -0.76
CTPS1-204ENST00000463423 GRIN2BQ13224 1484 aa10.27□□□□□ -0.77
CTPS1-204ENST00000463423 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
CTPS1-204ENST00000463423 KIF27Q86VH2 1401 aa10.25□□□□□ -0.77
CTPS1-204ENST00000463423 MAGI1Q96QZ7 1491 aaPredicted RBP10.24□□□□□ -0.77
CTPS1-204ENST00000463423 IGF1RP08069 1367 aa10.23□□□□□ -0.77
CTPS1-204ENST00000463423 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
CTPS1-204ENST00000463423 CUL7Q14999 1698 aa10.21□□□□□ -0.78
CTPS1-204ENST00000463423 CHD1O14646 1710 aa10.21□□□□□ -0.78
CTPS1-204ENST00000463423 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
CTPS1-204ENST00000463423 SYNJ2O15056 1496 aa10.19□□□□□ -0.78
CTPS1-204ENST00000463423 SNAPC4Q5SXM2 1469 aa10.19□□□□□ -0.78
CTPS1-204ENST00000463423 EEA1Q15075 1411 aa10.19□□□□□ -0.78
CTPS1-204ENST00000463423 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
CTPS1-204ENST00000463423 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
CTPS1-204ENST00000463423 OSCARQ8IYS5 282 aa10.16□□□□□ -0.78
CTPS1-204ENST00000463423 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
CTPS1-204ENST00000463423 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
CTPS1-204ENST00000463423 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
CTPS1-204ENST00000463423 GRIN2AQ12879 1464 aa10.14□□□□□ -0.79
CTPS1-204ENST00000463423 PRXQ9BXM0 1461 aa10.12□□□□□ -0.79
CTPS1-204ENST00000463423 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
CTPS1-204ENST00000463423 NUP160Q12769 1436 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms