RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
DDR1-264ENST00000508472 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
DDR1-264ENST00000508472 ABCC9O60706 1549 aa34.09■■■■□ 3.05
DDR1-264ENST00000508472 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
DDR1-264ENST00000508472 NACADO15069 1562 aa32.54■■■□□ 2.8
DDR1-264ENST00000508472 DCAF8L2P0C7V8 631 aa32.38■■■□□ 2.77
DDR1-264ENST00000508472 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
DDR1-264ENST00000508472 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
DDR1-264ENST00000508472 UNC13AQ9UPW8 1703 aa31.87■■■□□ 2.69
DDR1-264ENST00000508472 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
DDR1-264ENST00000508472 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.67
DDR1-264ENST00000508472 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
DDR1-264ENST00000508472 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
DDR1-264ENST00000508472 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
DDR1-264ENST00000508472 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
DDR1-264ENST00000508472 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
DDR1-264ENST00000508472 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
DDR1-264ENST00000508472 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
DDR1-264ENST00000508472 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
DDR1-264ENST00000508472 SMARCA4P51532 1647 aa29.97■■■□□ 2.39
DDR1-264ENST00000508472 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
DDR1-264ENST00000508472 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
DDR1-264ENST00000508472 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
DDR1-264ENST00000508472 HMGXB3Q12766 1538 aa29.82■■■□□ 2.36
DDR1-264ENST00000508472 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
DDR1-264ENST00000508472 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
DDR1-264ENST00000508472 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
DDR1-264ENST00000508472 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
DDR1-264ENST00000508472 CUX2O14529 1486 aa29.36■■■□□ 2.29
DDR1-264ENST00000508472 NESP48681 1621 aa29.32■■■□□ 2.28
DDR1-264ENST00000508472 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
DDR1-264ENST00000508472 WIZO95785 1651 aa29.28■■■□□ 2.28
DDR1-264ENST00000508472 PDS5BQ9NTI5 1447 aa29.15■■■□□ 2.26
DDR1-264ENST00000508472 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
DDR1-264ENST00000508472 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
DDR1-264ENST00000508472 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
DDR1-264ENST00000508472 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
DDR1-264ENST00000508472 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
DDR1-264ENST00000508472 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
DDR1-264ENST00000508472 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
DDR1-264ENST00000508472 CFTRP13569 1480 aa28.81■■■□□ 2.2
DDR1-264ENST00000508472 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
DDR1-264ENST00000508472 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
DDR1-264ENST00000508472 WDR62O43379 1518 aa28.74■■■□□ 2.19
DDR1-264ENST00000508472 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
DDR1-264ENST00000508472 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
DDR1-264ENST00000508472 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
DDR1-264ENST00000508472 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
DDR1-264ENST00000508472 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
DDR1-264ENST00000508472 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
DDR1-264ENST00000508472 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
DDR1-264ENST00000508472 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
DDR1-264ENST00000508472 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
DDR1-264ENST00000508472 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
DDR1-264ENST00000508472 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
DDR1-264ENST00000508472 TARBP1Q13395 1621 aaKnown RBP27.95■■■□□ 2.06
DDR1-264ENST00000508472 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
DDR1-264ENST00000508472 SOGA1O94964 1423 aa27.86■■■□□ 2.05
DDR1-264ENST00000508472 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.051e-7■■■■■ 31.3
DDR1-264ENST00000508472 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.04
DDR1-264ENST00000508472 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
DDR1-264ENST00000508472 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
DDR1-264ENST00000508472 CUX1P39880 1505 aa27.81■■■□□ 2.04
DDR1-264ENST00000508472 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
DDR1-264ENST00000508472 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
DDR1-264ENST00000508472 CHD1O14646 1710 aa27.7■■■□□ 2.03
DDR1-264ENST00000508472 FBLN2P98095 1184 aa27.67■■■□□ 2.02
DDR1-264ENST00000508472 RIMBP3CA6NJZ7 1639 aa27.61■■■□□ 2.01
DDR1-264ENST00000508472 RIMBP3BA6NNM3 1639 aa27.61■■■□□ 2.01
DDR1-264ENST00000508472 RIMBP3Q9UFD9 1639 aa27.61■■■□□ 2.01
DDR1-264ENST00000508472 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
DDR1-264ENST00000508472 MAGI1Q96QZ7 1491 aaPredicted RBP27.6■■■□□ 2.01
DDR1-264ENST00000508472 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
DDR1-264ENST00000508472 ARHGEF11O15085 1522 aa27.56■■■□□ 2
DDR1-264ENST00000508472 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
DDR1-264ENST00000508472 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
DDR1-264ENST00000508472 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
DDR1-264ENST00000508472 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
DDR1-264ENST00000508472 PBRM1Q86U86 1689 aa27.52■■■□□ 2
DDR1-264ENST00000508472 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
DDR1-264ENST00000508472 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
DDR1-264ENST00000508472 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
DDR1-264ENST00000508472 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
DDR1-264ENST00000508472 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
DDR1-264ENST00000508472 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
DDR1-264ENST00000508472 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
DDR1-264ENST00000508472 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
DDR1-264ENST00000508472 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
DDR1-264ENST00000508472 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
DDR1-264ENST00000508472 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
DDR1-264ENST00000508472 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
DDR1-264ENST00000508472 NUP160Q12769 1436 aa27.11■■□□□ 1.93
DDR1-264ENST00000508472 CEP170Q5SW79 1584 aa27.07■■□□□ 1.92
DDR1-264ENST00000508472 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
DDR1-264ENST00000508472 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
DDR1-264ENST00000508472 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
DDR1-264ENST00000508472 CUL7Q14999 1698 aa26.94■■□□□ 1.9
DDR1-264ENST00000508472 IGF1RP08069 1367 aa26.88■■□□□ 1.89
DDR1-264ENST00000508472 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
DDR1-264ENST00000508472 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms