RNA–Protein interactions for RNA: ENST00000372833.5

CHCHD1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD1, Length 835 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-201ENST00000372833 NISCHQ9Y2I1 1504 aa44.13■■■■■ 4.65
CHCHD1-201ENST00000372833 ABCC9O60706 1549 aa39.69■■■■□ 3.94
CHCHD1-201ENST00000372833 CCDC180Q9P1Z9 1646 aa39.58■■■■□ 3.93
CHCHD1-201ENST00000372833 RB1CC1Q8TDY2 1594 aa37.74■■■■□ 3.63
CHCHD1-201ENST00000372833 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
CHCHD1-201ENST00000372833 NACADO15069 1562 aa37.45■■■■□ 3.59
CHCHD1-201ENST00000372833 DNAJC5BQ9UF47 199 aa37.13■■■■□ 3.53
CHCHD1-201ENST00000372833 PABPN1Q86U42 306 aaKnown RBP eCLIP36.97■■■■□ 3.51
CHCHD1-201ENST00000372833 MYO15BQ96JP2 1530 aa36.86■■■■□ 3.49
CHCHD1-201ENST00000372833 UNC13AQ9UPW8 1703 aa36.79■■■■□ 3.48
CHCHD1-201ENST00000372833 ZCCHC6Q5VYS8 1495 aaKnown RBP36.56■■■■□ 3.44
CHCHD1-201ENST00000372833 BICRAQ9NZM4 1560 aa36.54■■■■□ 3.44
CHCHD1-201ENST00000372833 DCAF1Q9Y4B6 1507 aa36.4■■■■□ 3.42
CHCHD1-201ENST00000372833 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
CHCHD1-201ENST00000372833 SHROOM4Q9ULL8 1493 aa36.1■■■■□ 3.37
CHCHD1-201ENST00000372833 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
CHCHD1-201ENST00000372833 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
CHCHD1-201ENST00000372833 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
CHCHD1-201ENST00000372833 NCAPD3P42695 1498 aa34.54■■■■□ 3.12
CHCHD1-201ENST00000372833 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
CHCHD1-201ENST00000372833 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
CHCHD1-201ENST00000372833 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
CHCHD1-201ENST00000372833 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
CHCHD1-201ENST00000372833 HMGXB3Q12766 1538 aa34.31■■■■□ 3.08
CHCHD1-201ENST00000372833 BAZ1AQ9NRL2 1556 aaPredicted RBP34.29■■■■□ 3.08
CHCHD1-201ENST00000372833 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.07
CHCHD1-201ENST00000372833 CUX2O14529 1486 aa34.17■■■■□ 3.06
CHCHD1-201ENST00000372833 DNAJC5Q9H3Z4 198 aa34.14■■■■□ 3.06
CHCHD1-201ENST00000372833 NESP48681 1621 aa34.05■■■■□ 3.04
CHCHD1-201ENST00000372833 PEG3Q9GZU2 1588 aa34.04■■■■□ 3.04
CHCHD1-201ENST00000372833 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
CHCHD1-201ENST00000372833 LAMC3Q9Y6N6 1575 aa33.81■■■■□ 3
CHCHD1-201ENST00000372833 THOC2Q8NI27 1593 aaKnown RBP33.66■■■□□ 2.98
CHCHD1-201ENST00000372833 PDS5BQ9NTI5 1447 aa33.66■■■□□ 2.98
CHCHD1-201ENST00000372833 WIZO95785 1651 aa33.61■■■□□ 2.97
CHCHD1-201ENST00000372833 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
CHCHD1-201ENST00000372833 CADPSQ9ULU8 1353 aa33.54■■■□□ 2.96
CHCHD1-201ENST00000372833 MRC2Q9UBG0 1479 aa33.36■■■□□ 2.93
CHCHD1-201ENST00000372833 RSF1Q96T23 1441 aaPredicted RBP33.3■■■□□ 2.92
CHCHD1-201ENST00000372833 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
CHCHD1-201ENST00000372833 WDR62O43379 1518 aa33.23■■■□□ 2.91
CHCHD1-201ENST00000372833 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
CHCHD1-201ENST00000372833 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
CHCHD1-201ENST00000372833 CFTRP13569 1480 aa33.13■■■□□ 2.89
CHCHD1-201ENST00000372833 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CHCHD1-201ENST00000372833 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
CHCHD1-201ENST00000372833 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
CHCHD1-201ENST00000372833 PRDM2Q13029 1718 aa32.78■■■□□ 2.84
CHCHD1-201ENST00000372833 OSCARQ8IYS5 282 aa32.67■■■□□ 2.82
CHCHD1-201ENST00000372833 IFT140Q96RY7 1462 aa32.55■■■□□ 2.8
CHCHD1-201ENST00000372833 TOPBP1Q92547 1522 aa32.53■■■□□ 2.8
CHCHD1-201ENST00000372833 ZNF608Q9ULD9 1512 aaPredicted RBP32.48■■■□□ 2.79
CHCHD1-201ENST00000372833 ABCC8Q09428 1581 aa32.48■■■□□ 2.79
CHCHD1-201ENST00000372833 DNMBPQ6XZF7 1577 aa32.42■■■□□ 2.78
CHCHD1-201ENST00000372833 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
CHCHD1-201ENST00000372833 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.759e-12■■■■■ 44.9
CHCHD1-201ENST00000372833 TARBP1Q13395 1621 aaKnown RBP32.2■■■□□ 2.75
CHCHD1-201ENST00000372833 POLA1P09884 1462 aaPredicted RBP32.2■■■□□ 2.75
CHCHD1-201ENST00000372833 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
CHCHD1-201ENST00000372833 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
CHCHD1-201ENST00000372833 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
CHCHD1-201ENST00000372833 FBLN2P98095 1184 aa32.14■■■□□ 2.74
CHCHD1-201ENST00000372833 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
CHCHD1-201ENST00000372833 ARHGEF11O15085 1522 aa32.1■■■□□ 2.73
CHCHD1-201ENST00000372833 SOGA1O94964 1423 aa32.09■■■□□ 2.73
CHCHD1-201ENST00000372833 CHD1O14646 1710 aa32.07■■■□□ 2.72
CHCHD1-201ENST00000372833 TDRD9Q8NDG6 1382 aaKnown RBP32.04■■■□□ 2.72
CHCHD1-201ENST00000372833 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
CHCHD1-201ENST00000372833 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
CHCHD1-201ENST00000372833 CUX1P39880 1505 aa31.95■■■□□ 2.71
CHCHD1-201ENST00000372833 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
CHCHD1-201ENST00000372833 SNAPC4Q5SXM2 1469 aa31.9■■■□□ 2.7
CHCHD1-201ENST00000372833 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
CHCHD1-201ENST00000372833 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
CHCHD1-201ENST00000372833 GRIN2BQ13224 1484 aa31.81■■■□□ 2.68
CHCHD1-201ENST00000372833 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
CHCHD1-201ENST00000372833 ARAP1Q96P48 1450 aa31.76■■■□□ 2.67
CHCHD1-201ENST00000372833 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
CHCHD1-201ENST00000372833 SYNJ2O15056 1496 aa31.7■■■□□ 2.66
CHCHD1-201ENST00000372833 GAPVD1Q14C86 1478 aa31.7■■■□□ 2.66
CHCHD1-201ENST00000372833 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
CHCHD1-201ENST00000372833 TRHP20396 242 aaPredicted RBP31.66■■■□□ 2.66
CHCHD1-201ENST00000372833 PBRM1Q86U86 1689 aa31.66■■■□□ 2.66
CHCHD1-201ENST00000372833 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
CHCHD1-201ENST00000372833 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.64
CHCHD1-201ENST00000372833 ABCA5Q8WWZ7 1642 aa31.56■■■□□ 2.64
CHCHD1-201ENST00000372833 TOP2BQ02880 1626 aa31.45■■■□□ 2.62
CHCHD1-201ENST00000372833 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
CHCHD1-201ENST00000372833 GRIN2AQ12879 1464 aa31.39■■■□□ 2.62
CHCHD1-201ENST00000372833 ADAMTS12P58397 1594 aa31.35■■■□□ 2.61
CHCHD1-201ENST00000372833 FHAD1B1AJZ9 1412 aa31.29■■■□□ 2.6
CHCHD1-201ENST00000372833 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
CHCHD1-201ENST00000372833 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
CHCHD1-201ENST00000372833 NUP160Q12769 1436 aa31.24■■■□□ 2.59
CHCHD1-201ENST00000372833 ERCC6L2Q5T890 1561 aa31.18■■■□□ 2.58
CHCHD1-201ENST00000372833 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
CHCHD1-201ENST00000372833 PRG4Q92954 1404 aaPredicted RBP31.02■■■□□ 2.56
CHCHD1-201ENST00000372833 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
CHCHD1-201ENST00000372833 RUSC2Q8N2Y8 1516 aa30.91■■■□□ 2.54
CHCHD1-201ENST00000372833 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms