Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 C4BPB-206ENST00000469326 1992 ntTSL 29.68□□□□□ -0.862e-9■□□□□ 9
LARP4Q71RC2 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-9■□□□□ 9
LARP4Q71RC2 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.992e-9■□□□□ 9
LARP4Q71RC2 C4BPB-205ENST00000452902 742 ntTSL 38.79□□□□□ -12e-9■□□□□ 9
LARP4Q71RC2 C4BPB-207ENST00000470767 652 ntTSL 28.69□□□□□ -1.022e-9■□□□□ 9
LARP4Q71RC2 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.162e-9■□□□□ 9
LARP4Q71RC2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.6□□□□□ -1.193e-7■□□□□ 9
LARP4Q71RC2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.44■□□□□ 0.74e-33■□□□□ 9
LARP4Q71RC2 ARF1-208ENST00000478336 930 ntTSL 222.09■■□□□ 1.137e-29■□□□□ 9
LARP4Q71RC2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.99□□□□□ -0.014e-6■□□□□ 9
LARP4Q71RC2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.394e-6■□□□□ 9
LARP4Q71RC2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15□□□□□ -0.013e-7■□□□□ 9
LARP4Q71RC2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.024e-6■□□□□ 9
LARP4Q71RC2 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.233e-7■□□□□ 9
LARP4Q71RC2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.244e-6■□□□□ 9
LARP4Q71RC2 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■□□□□ 9
LARP4Q71RC2 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■□□□□ 9
LARP4Q71RC2 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.554e-6■□□□□ 9
LARP4Q71RC2 DDB1-224ENST00000545894 2282 ntTSL 211.48□□□□□ -0.574e-6■□□□□ 9
LARP4Q71RC2 DDB1-203ENST00000451943 1224 ntTSL 28.51□□□□□ -1.054e-6■□□□□ 9
LARP4Q71RC2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.55e-8■□□□□ 9
LARP4Q71RC2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.155e-8■□□□□ 9
LARP4Q71RC2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.37■□□□□ 0.695e-8■□□□□ 9
LARP4Q71RC2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.45e-8■□□□□ 9
LARP4Q71RC2 ILVBL-207ENST00000533148 1309 ntTSL 515.92■□□□□ 0.145e-8■□□□□ 9
LARP4Q71RC2 ILVBL-212ENST00000598709 747 ntTSL 513.72□□□□□ -0.215e-8■□□□□ 9
LARP4Q71RC2 EGLN3-208ENST00000551935 575 ntTSL 413.21□□□□□ -0.295e-8■□□□□ 9
LARP4Q71RC2 ILVBL-203ENST00000525880 687 ntTSL 213.13□□□□□ -0.315e-8■□□□□ 9
LARP4Q71RC2 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC12.13□□□□□ -0.475e-8■□□□□ 9
LARP4Q71RC2 ILVBL-211ENST00000596093 576 ntTSL 210.62□□□□□ -0.715e-8■□□□□ 9
LARP4Q71RC2 TM9SF4-207ENST00000495749 3023 ntTSL 29.04□□□□□ -0.965e-8■□□□□ 9
LARP4Q71RC2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.425e-8■□□□□ 9
LARP4Q71RC2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-8■□□□□ 9
LARP4Q71RC2 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.831e-8■□□□□ 9
LARP4Q71RC2 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.831e-8■□□□□ 9
LARP4Q71RC2 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.831e-8■□□□□ 9
LARP4Q71RC2 PABPC1-204ENST00000517990 487 ntTSL 55.55□□□□□ -1.521e-77■□□□□ 9
LARP4Q71RC2 PABPC1-223ENST00000523636 818 ntTSL 55.1□□□□□ -1.591e-77■□□□□ 9
LARP4Q71RC2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 04e-8■□□□□ 9
LARP4Q71RC2 MRPL38-217ENST00000588620 498 ntTSL 311.78□□□□□ -0.521e-6■□□□□ 9
LARP4Q71RC2 AC087289.3-202ENST00000593156 4270 ntTSL 211.77□□□□□ -0.531e-6■□□□□ 9
LARP4Q71RC2 MRPL38-211ENST00000483393 525 ntTSL 28.84□□□□□ -0.991e-6■□□□□ 9
LARP4Q71RC2 MRPL38-210ENST00000480203 534 ntTSL 37.95□□□□□ -1.141e-6■□□□□ 9
LARP4Q71RC2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.347e-10■□□□□ 9
LARP4Q71RC2 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.927e-10■□□□□ 9
LARP4Q71RC2 LUC7L3-203ENST00000503728 783 ntTSL 56.18□□□□□ -1.427e-10■□□□□ 9
LARP4Q71RC2 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.731e-7■□□□□ 8.9
LARP4Q71RC2 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC9.33□□□□□ -0.921e-7■□□□□ 8.9
LARP4Q71RC2 TBCA-208ENST00000520361 446 ntTSL 2 BASIC8.56□□□□□ -1.041e-7■□□□□ 8.9
LARP4Q71RC2 TBCA-205ENST00000518218 717 ntTSL 27.54□□□□□ -1.21e-7■□□□□ 8.9
LARP4Q71RC2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.71□□□□□ -1.51e-7■□□□□ 8.9
LARP4Q71RC2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.95□□□□□ -1.621e-7■□□□□ 8.9
LARP4Q71RC2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.14■□□□□ 0.333e-28■□□□□ 8.9
LARP4Q71RC2 RPS4X-202ENST00000373626 594 ntTSL 38.23□□□□□ -1.091e-11■□□□□ 8.9
LARP4Q71RC2 RPS4X-204ENST00000486733 1820 ntTSL 57.8□□□□□ -1.161e-11■□□□□ 8.9
LARP4Q71RC2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.46■□□□□ 0.552e-7■□□□□ 8.9
LARP4Q71RC2 PLEKHB1-220ENST00000545106 813 ntTSL 218.46■□□□□ 0.552e-7■□□□□ 8.9
LARP4Q71RC2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.22e-7■□□□□ 8.9
LARP4Q71RC2 ATP5G3-204ENST00000472782 686 ntTSL 213.6□□□□□ -0.232e-13■□□□□ 8.9
LARP4Q71RC2 ESPN-217ENST00000636644 544 ntTSL 516.48■□□□□ 0.234e-7■□□□□ 8.9
LARP4Q71RC2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.214e-7■□□□□ 8.9
LARP4Q71RC2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.37□□□□□ -0.274e-7■□□□□ 8.9
LARP4Q71RC2 RPS2-215ENST00000533872 1114 ntTSL 522.91■■□□□ 1.264e-8■□□□□ 8.9
LARP4Q71RC2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.339e-10■□□□□ 8.9
LARP4Q71RC2 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.061e-11■□□□□ 8.9
LARP4Q71RC2 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.884e-12■□□□□ 8.9
LARP4Q71RC2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.56■□□□□ 0.561e-36■□□□□ 8.9
LARP4Q71RC2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.26■□□□□ 0.511e-36■□□□□ 8.9
LARP4Q71RC2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.491e-36■□□□□ 8.9
LARP4Q71RC2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.05□□□□□ -0.321e-36■□□□□ 8.9
LARP4Q71RC2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.03□□□□□ -0.328e-10■□□□□ 8.9
LARP4Q71RC2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.328e-10■□□□□ 8.9
LARP4Q71RC2 SAT1-209ENST00000489394 1135 ntTSL 210.12□□□□□ -0.798e-10■□□□□ 8.9
LARP4Q71RC2 SAT1-207ENST00000474223 1033 ntTSL 26.6□□□□□ -1.358e-10■□□□□ 8.9
LARP4Q71RC2 SAT1-206ENST00000463236 735 ntTSL 35.92□□□□□ -1.468e-10■□□□□ 8.9
LARP4Q71RC2 SAT1-205ENST00000462639 826 ntTSL 25.61□□□□□ -1.518e-10■□□□□ 8.9
LARP4Q71RC2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.12■□□□□ 0.971e-10■□□□□ 8.9
LARP4Q71RC2 ERRFI1-205ENST00000487559 787 ntTSL 221.12■□□□□ 0.971e-10■□□□□ 8.9
LARP4Q71RC2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.81■□□□□ 0.921e-10■□□□□ 8.9
LARP4Q71RC2 FKBP8-203ENST00000594844 593 ntTSL 419.21■□□□□ 0.671e-10■□□□□ 8.9
LARP4Q71RC2 SLC16A3-209ENST00000580098 859 ntTSL 217.98■□□□□ 0.471e-10■□□□□ 8.9
LARP4Q71RC2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.071e-10■□□□□ 8.9
LARP4Q71RC2 FKBP8-207ENST00000597547 574 ntTSL 315.33■□□□□ 0.041e-10■□□□□ 8.9
LARP4Q71RC2 FKBP8-208ENST00000597611 966 ntTSL 314.08□□□□□ -0.161e-10■□□□□ 8.9
LARP4Q71RC2 FKBP8-210ENST00000599540 1140 ntTSL 212.07□□□□□ -0.481e-10■□□□□ 8.9
LARP4Q71RC2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.71■■□□□ 1.078e-8■□□□□ 8.9
LARP4Q71RC2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.41■■□□□ 1.021e-6■□□□□ 8.9
LARP4Q71RC2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.13■□□□□ 0.978e-8■□□□□ 8.9
LARP4Q71RC2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.961e-6■□□□□ 8.9
LARP4Q71RC2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.53■□□□□ 0.888e-8■□□□□ 8.9
LARP4Q71RC2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.29■□□□□ 0.841e-6■□□□□ 8.9
LARP4Q71RC2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.835e-9■□□□□ 8.9
LARP4Q71RC2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.18■□□□□ 0.821e-6■□□□□ 8.9
LARP4Q71RC2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.818e-8■□□□□ 8.9
LARP4Q71RC2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.748e-8■□□□□ 8.9
LARP4Q71RC2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.731e-6■□□□□ 8.9
LARP4Q71RC2 TMPO-209ENST00000549938 696 ntTSL 419.21■□□□□ 0.671e-6■□□□□ 8.9
LARP4Q71RC2 PMPCB-205ENST00000453466 1509 ntTSL 519.05■□□□□ 0.648e-8■□□□□ 8.9
LARP4Q71RC2 ABHD17A-203ENST00000588598 5425 ntTSL 218.83■□□□□ 0.618e-8■□□□□ 8.9
LARP4Q71RC2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.78■□□□□ 0.61e-6■□□□□ 8.9
Retrieved 100 of 15,922 protein–RNA pairs in 402.8 ms