RNA–Protein interactions for RNA: ENST00000359087.8

NAE1-202, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2 BASIC

Gene NAE1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-202ENST00000359087 NISCHQ9Y2I1 1504 aa50.98■■■■■ 5.75
NAE1-202ENST00000359087 CCDC180Q9P1Z9 1646 aa44.62■■■■■ 4.73
NAE1-202ENST00000359087 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
NAE1-202ENST00000359087 ABCC9O60706 1549 aa42.2■■■■■ 4.35
NAE1-202ENST00000359087 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
NAE1-202ENST00000359087 DCAF8L2P0C7V8 631 aa42.06■■■■■ 4.32
NAE1-202ENST00000359087 MYO15BQ96JP2 1530 aa41.72■■■■■ 4.27
NAE1-202ENST00000359087 NACADO15069 1562 aa41.53■■■■■ 4.24
NAE1-202ENST00000359087 SHROOM4Q9ULL8 1493 aa41.42■■■■■ 4.22
NAE1-202ENST00000359087 RB1CC1Q8TDY2 1594 aa41.22■■■■■ 4.19
NAE1-202ENST00000359087 SCRIBQ14160 1630 aa40.96■■■■■ 4.15
NAE1-202ENST00000359087 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
NAE1-202ENST00000359087 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
NAE1-202ENST00000359087 SUPT5HO00267 1087 aaKnown RBP39.77■■■■□ 3.96
NAE1-202ENST00000359087 PABPN1Q86U42 306 aaKnown RBP eCLIP39.71■■■■□ 3.95
NAE1-202ENST00000359087 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
NAE1-202ENST00000359087 RSF1Q96T23 1441 aaPredicted RBP39.45■■■■□ 3.91
NAE1-202ENST00000359087 BAZ1AQ9NRL2 1556 aaPredicted RBP39.4■■■■□ 3.9
NAE1-202ENST00000359087 MROH2BQ7Z745 1585 aa39.36■■■■□ 3.89
NAE1-202ENST00000359087 SMARCA4P51532 1647 aa39.26■■■■□ 3.88
NAE1-202ENST00000359087 WIZO95785 1651 aa39.1■■■■□ 3.85
NAE1-202ENST00000359087 PEG3Q9GZU2 1588 aa38.79■■■■□ 3.8
NAE1-202ENST00000359087 EIF4G1Q04637 1599 aaKnown RBP38.77■■■■□ 3.8
NAE1-202ENST00000359087 TOP2AP11388 1531 aaKnown RBP38.67■■■■□ 3.78
NAE1-202ENST00000359087 SMARCA2P51531 1590 aa38.62■■■■□ 3.77
NAE1-202ENST00000359087 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
NAE1-202ENST00000359087 BAZ1BQ9UIG0 1483 aaKnown RBP38.39■■■■□ 3.74
NAE1-202ENST00000359087 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
NAE1-202ENST00000359087 NCAPD3P42695 1498 aa38.28■■■■□ 3.72
NAE1-202ENST00000359087 CC2D2AQ9P2K1 1620 aa38.24■■■■□ 3.71
NAE1-202ENST00000359087 CCDC88BA6NC98 1476 aa38.22■■■■□ 3.71
NAE1-202ENST00000359087 CHIC1Q5VXU3 224 aa37.99■■■■□ 3.67
NAE1-202ENST00000359087 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
NAE1-202ENST00000359087 ABCC8Q09428 1581 aa37.41■■■■□ 3.58
NAE1-202ENST00000359087 CFTRP13569 1480 aa37.4■■■■□ 3.58
NAE1-202ENST00000359087 PRDM2Q13029 1718 aa37.39■■■■□ 3.58
NAE1-202ENST00000359087 CADPSQ9ULU8 1353 aa37.28■■■■□ 3.56
NAE1-202ENST00000359087 DNAJC5BQ9UF47 199 aa37.25■■■■□ 3.55
NAE1-202ENST00000359087 WRNQ14191 1432 aaPredicted RBP eCLIP37.16■■■■□ 3.54
NAE1-202ENST00000359087 LAMC3Q9Y6N6 1575 aa37.07■■■■□ 3.53
NAE1-202ENST00000359087 SYNJ1O43426 1573 aa37.06■■■■□ 3.52
NAE1-202ENST00000359087 NESP48681 1621 aa37.01■■■■□ 3.51
NAE1-202ENST00000359087 TOP2BQ02880 1626 aa36.93■■■■□ 3.5
NAE1-202ENST00000359087 BIVM-ERCC5R4GMW8 1640 aa36.93■■■■□ 3.5
NAE1-202ENST00000359087 FANCD2Q9BXW9 1451 aa36.89■■■■□ 3.5
NAE1-202ENST00000359087 CUX1P39880 1505 aa36.83■■■■□ 3.49
NAE1-202ENST00000359087 PDS5BQ9NTI5 1447 aa36.73■■■■□ 3.47
NAE1-202ENST00000359087 FAM9AQ8IZU1 332 aaPredicted RBP36.71■■■■□ 3.47
NAE1-202ENST00000359087 CEP164Q9UPV0 1460 aa36.69■■■■□ 3.46
NAE1-202ENST00000359087 KIF21AQ7Z4S6 1674 aa36.68■■■■□ 3.46
NAE1-202ENST00000359087 SOGA1O94964 1423 aa36.62■■■■□ 3.45
NAE1-202ENST00000359087 DNMBPQ6XZF7 1577 aa36.58■■■■□ 3.45
NAE1-202ENST00000359087 EEA1Q15075 1411 aa36.57■■■■□ 3.45
NAE1-202ENST00000359087 LOC105371045A0A1W2PR82 267 aa36.51■■■■□ 3.44
NAE1-202ENST00000359087 RUSC2Q8N2Y8 1516 aa36.51■■■■□ 3.43
NAE1-202ENST00000359087 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
NAE1-202ENST00000359087 FGD5Q6ZNL6 1462 aa36.45■■■■□ 3.43
NAE1-202ENST00000359087 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
NAE1-202ENST00000359087 CSRNP3Q8WYN3 585 aa36.32■■■■□ 3.41
NAE1-202ENST00000359087 POLA1P09884 1462 aaPredicted RBP36.29■■■■□ 3.4
NAE1-202ENST00000359087 MRC2Q9UBG0 1479 aa36.28■■■■□ 3.4
NAE1-202ENST00000359087 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
NAE1-202ENST00000359087 ERCC6Q03468 1493 aa36.22■■■■□ 3.39
NAE1-202ENST00000359087 EHMT2Q96KQ7 1210 aa36.19■■■■□ 3.38
NAE1-202ENST00000359087 CUX2O14529 1486 aa36.17■■■■□ 3.38
NAE1-202ENST00000359087 RAD54L2Q9Y4B4 1467 aa36.16■■■■□ 3.38
NAE1-202ENST00000359087 KIF21BO75037 1637 aa36.15■■■■□ 3.38
NAE1-202ENST00000359087 ABCA10Q8WWZ4 1543 aa36.13■■■■□ 3.37
NAE1-202ENST00000359087 WDR62O43379 1518 aa36.12■■■■□ 3.37
NAE1-202ENST00000359087 WDR97A6NE52 1622 aa36.12■■■■□ 3.37
NAE1-202ENST00000359087 THOC2Q8NI27 1593 aaKnown RBP36.07■■■■□ 3.36
NAE1-202ENST00000359087 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
NAE1-202ENST00000359087 TARBP1Q13395 1621 aaKnown RBP35.99■■■■□ 3.35
NAE1-202ENST00000359087 PRXQ9BXM0 1461 aa35.95■■■■□ 3.35
NAE1-202ENST00000359087 ERICH3Q5RHP9 1530 aa35.93■■■■□ 3.34
NAE1-202ENST00000359087 RAPGEF2Q9Y4G8 1499 aa35.91■■■■□ 3.34
NAE1-202ENST00000359087 ABCA5Q8WWZ7 1642 aa35.89■■■■□ 3.34
NAE1-202ENST00000359087 TNIKQ9UKE5 1360 aa35.89■■■■□ 3.34
NAE1-202ENST00000359087 IGF1RP08069 1367 aa35.88■■■■□ 3.33
NAE1-202ENST00000359087 UBTFP17480 764 aaKnown RBP35.85■■■■□ 3.33
NAE1-202ENST00000359087 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
NAE1-202ENST00000359087 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
NAE1-202ENST00000359087 GAPVD1Q14C86 1478 aa35.78■■■■□ 3.32
NAE1-202ENST00000359087 CUL7Q14999 1698 aa35.76■■■■□ 3.31
NAE1-202ENST00000359087 CARMIL1Q5VZK9 1371 aa35.72■■■■□ 3.31
NAE1-202ENST00000359087 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
NAE1-202ENST00000359087 CEP162Q5TB80 1403 aa35.7■■■■□ 3.31
NAE1-202ENST00000359087 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.294e-7■■■■□ 20.2
NAE1-202ENST00000359087 ZNF608Q9ULD9 1512 aaPredicted RBP35.6■■■■□ 3.29
NAE1-202ENST00000359087 EIF4G3O43432 1585 aaKnown RBP35.56■■■■□ 3.28
NAE1-202ENST00000359087 GRIN2BQ13224 1484 aa35.52■■■■□ 3.28
NAE1-202ENST00000359087 CLIP1P30622 1438 aa35.46■■■■□ 3.27
NAE1-202ENST00000359087 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
NAE1-202ENST00000359087 CTTNBP2Q8WZ74 1663 aa35.39■■■■□ 3.26
NAE1-202ENST00000359087 FHAD1B1AJZ9 1412 aa35.37■■■■□ 3.25
NAE1-202ENST00000359087 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
NAE1-202ENST00000359087 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
NAE1-202ENST00000359087 MAGI1Q96QZ7 1491 aaPredicted RBP35.25■■■■□ 3.23
NAE1-202ENST00000359087 ARHGAP35Q9NRY4 1499 aa35.16■■■■□ 3.22
NAE1-202ENST00000359087 ARAP1Q96P48 1450 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms