RNA–Protein interactions for RNA: ENST00000379463.6

NAE1-203, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2 BASIC

Gene NAE1, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-203ENST00000379463 NISCHQ9Y2I1 1504 aa46.72■■■■■ 5.07
NAE1-203ENST00000379463 CCDC180Q9P1Z9 1646 aa40.59■■■■■ 4.09
NAE1-203ENST00000379463 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
NAE1-203ENST00000379463 DCAF1Q9Y4B6 1507 aa38.62■■■■□ 3.77
NAE1-203ENST00000379463 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
NAE1-203ENST00000379463 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
NAE1-203ENST00000379463 ABCC9O60706 1549 aa38.14■■■■□ 3.7
NAE1-203ENST00000379463 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
NAE1-203ENST00000379463 NACADO15069 1562 aa37.74■■■■□ 3.63
NAE1-203ENST00000379463 SCRIBQ14160 1630 aa37.38■■■■□ 3.57
NAE1-203ENST00000379463 RB1CC1Q8TDY2 1594 aa37.35■■■■□ 3.57
NAE1-203ENST00000379463 SUPT5HO00267 1087 aaKnown RBP36.99■■■■□ 3.51
NAE1-203ENST00000379463 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
NAE1-203ENST00000379463 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
NAE1-203ENST00000379463 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
NAE1-203ENST00000379463 BICRAQ9NZM4 1560 aa36.23■■■■□ 3.39
NAE1-203ENST00000379463 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
NAE1-203ENST00000379463 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
NAE1-203ENST00000379463 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
NAE1-203ENST00000379463 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
NAE1-203ENST00000379463 WIZO95785 1651 aa35.82■■■■□ 3.32
NAE1-203ENST00000379463 CHIC1Q5VXU3 224 aa35.56■■■■□ 3.28
NAE1-203ENST00000379463 TOP2AP11388 1531 aaKnown RBP35.45■■■■□ 3.27
NAE1-203ENST00000379463 PEG3Q9GZU2 1588 aa35.41■■■■□ 3.26
NAE1-203ENST00000379463 ATAD2BQ9ULI0 1458 aa35.19■■■■□ 3.22
NAE1-203ENST00000379463 SMARCA2P51531 1590 aa35.18■■■■□ 3.22
NAE1-203ENST00000379463 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
NAE1-203ENST00000379463 CCDC88BA6NC98 1476 aa35.1■■■■□ 3.21
NAE1-203ENST00000379463 BAZ1BQ9UIG0 1483 aaKnown RBP35.01■■■■□ 3.2
NAE1-203ENST00000379463 NCAPD3P42695 1498 aa34.84■■■■□ 3.17
NAE1-203ENST00000379463 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
NAE1-203ENST00000379463 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
NAE1-203ENST00000379463 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
NAE1-203ENST00000379463 ABCC8Q09428 1581 aa34.46■■■■□ 3.11
NAE1-203ENST00000379463 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
NAE1-203ENST00000379463 LOC105371045A0A1W2PR82 267 aa34.21■■■■□ 3.07
NAE1-203ENST00000379463 CFTRP13569 1480 aa34.16■■■■□ 3.06
NAE1-203ENST00000379463 FAM9AQ8IZU1 332 aaPredicted RBP34.13■■■■□ 3.05
NAE1-203ENST00000379463 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
NAE1-203ENST00000379463 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
NAE1-203ENST00000379463 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
NAE1-203ENST00000379463 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
NAE1-203ENST00000379463 SOGA1O94964 1423 aa33.87■■■■□ 3.01
NAE1-203ENST00000379463 EEA1Q15075 1411 aa33.86■■■■□ 3.01
NAE1-203ENST00000379463 BIVM-ERCC5R4GMW8 1640 aa33.85■■■■□ 3.01
NAE1-203ENST00000379463 CUX1P39880 1505 aa33.74■■■□□ 2.99
NAE1-203ENST00000379463 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
NAE1-203ENST00000379463 CSRNP3Q8WYN3 585 aa33.65■■■□□ 2.98
NAE1-203ENST00000379463 EHMT2Q96KQ7 1210 aa33.63■■■□□ 2.97
NAE1-203ENST00000379463 LAMC3Q9Y6N6 1575 aa33.61■■■□□ 2.97
NAE1-203ENST00000379463 FANCD2Q9BXW9 1451 aa33.6■■■□□ 2.97
NAE1-203ENST00000379463 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
NAE1-203ENST00000379463 NESP48681 1621 aa33.59■■■□□ 2.97
NAE1-203ENST00000379463 GOLGA3Q08378 1498 aa33.41■■■□□ 2.94
NAE1-203ENST00000379463 KIF21BO75037 1637 aa33.41■■■□□ 2.94
NAE1-203ENST00000379463 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
NAE1-203ENST00000379463 TNIKQ9UKE5 1360 aa33.36■■■□□ 2.93
NAE1-203ENST00000379463 PDS5BQ9NTI5 1447 aa33.35■■■□□ 2.93
NAE1-203ENST00000379463 DNMBPQ6XZF7 1577 aa33.34■■■□□ 2.93
NAE1-203ENST00000379463 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
NAE1-203ENST00000379463 KIF27Q86VH2 1401 aa33.32■■■□□ 2.92
NAE1-203ENST00000379463 TOPBP1Q92547 1522 aa33.26■■■□□ 2.92
NAE1-203ENST00000379463 UBTFP17480 764 aaKnown RBP33.24■■■□□ 2.91
NAE1-203ENST00000379463 CEP162Q5TB80 1403 aa33.2■■■□□ 2.91
NAE1-203ENST00000379463 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
NAE1-203ENST00000379463 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
NAE1-203ENST00000379463 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
NAE1-203ENST00000379463 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
NAE1-203ENST00000379463 CUX2O14529 1486 aa33.16■■■□□ 2.9
NAE1-203ENST00000379463 POLA1P09884 1462 aaPredicted RBP33.14■■■□□ 2.9
NAE1-203ENST00000379463 ERICH3Q5RHP9 1530 aa33.14■■■□□ 2.9
NAE1-203ENST00000379463 ABCA10Q8WWZ4 1543 aa33.04■■■□□ 2.88
NAE1-203ENST00000379463 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
NAE1-203ENST00000379463 IGF1RP08069 1367 aa32.99■■■□□ 2.87
NAE1-203ENST00000379463 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
NAE1-203ENST00000379463 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
NAE1-203ENST00000379463 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
NAE1-203ENST00000379463 CLIP1P30622 1438 aa32.88■■■□□ 2.85
NAE1-203ENST00000379463 TRIM26Q12899 539 aaPredicted RBP32.87■■■□□ 2.85
NAE1-203ENST00000379463 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
NAE1-203ENST00000379463 TARBP1Q13395 1621 aaKnown RBP32.75■■■□□ 2.83
NAE1-203ENST00000379463 ABCA5Q8WWZ7 1642 aa32.75■■■□□ 2.83
NAE1-203ENST00000379463 WDR62O43379 1518 aa32.72■■■□□ 2.83
NAE1-203ENST00000379463 CUL7Q14999 1698 aa32.71■■■□□ 2.83
NAE1-203ENST00000379463 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
NAE1-203ENST00000379463 TDRD9Q8NDG6 1382 aaKnown RBP32.68■■■□□ 2.82
NAE1-203ENST00000379463 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
NAE1-203ENST00000379463 VPS8Q8N3P4 1428 aa32.64■■■□□ 2.82
NAE1-203ENST00000379463 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
NAE1-203ENST00000379463 PPARGC1BQ86YN6 1023 aaKnown RBP32.57■■■□□ 2.81
NAE1-203ENST00000379463 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
NAE1-203ENST00000379463 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
NAE1-203ENST00000379463 ARAP1Q96P48 1450 aa32.53■■■□□ 2.8
NAE1-203ENST00000379463 ARHGAP35Q9NRY4 1499 aa32.47■■■□□ 2.79
NAE1-203ENST00000379463 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
NAE1-203ENST00000379463 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.784e-7■■■■□ 20.2
NAE1-203ENST00000379463 CTTNBP2Q8WZ74 1663 aa32.38■■■□□ 2.77
NAE1-203ENST00000379463 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
NAE1-203ENST00000379463 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
NAE1-203ENST00000379463 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms