RNA–Protein interactions for RNA: ENST00000290810.7

NAE1-201, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NAE1, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-201ENST00000290810 NISCHQ9Y2I1 1504 aa45.4■■■■■ 4.86
NAE1-201ENST00000290810 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
NAE1-201ENST00000290810 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
NAE1-201ENST00000290810 DCAF1Q9Y4B6 1507 aa37.63■■■■□ 3.61
NAE1-201ENST00000290810 DCAF8L2P0C7V8 631 aa37.22■■■■□ 3.55
NAE1-201ENST00000290810 ABCC9O60706 1549 aa37.18■■■■□ 3.54
NAE1-201ENST00000290810 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
NAE1-201ENST00000290810 SHROOM4Q9ULL8 1493 aa36.91■■■■□ 3.5
NAE1-201ENST00000290810 NACADO15069 1562 aa36.83■■■■□ 3.49
NAE1-201ENST00000290810 RB1CC1Q8TDY2 1594 aa36.47■■■■□ 3.43
NAE1-201ENST00000290810 SCRIBQ14160 1630 aa36.31■■■■□ 3.4
NAE1-201ENST00000290810 UNC13AQ9UPW8 1703 aa35.74■■■■□ 3.31
NAE1-201ENST00000290810 SUPT5HO00267 1087 aaKnown RBP35.57■■■■□ 3.28
NAE1-201ENST00000290810 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
NAE1-201ENST00000290810 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
NAE1-201ENST00000290810 CECR2Q9BXF3 1484 aa35.2■■■■□ 3.23
NAE1-201ENST00000290810 BAZ1AQ9NRL2 1556 aaPredicted RBP35.07■■■■□ 3.2
NAE1-201ENST00000290810 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
NAE1-201ENST00000290810 PABPN1Q86U42 306 aaKnown RBP eCLIP35.02■■■■□ 3.2
NAE1-201ENST00000290810 SMARCA4P51532 1647 aa34.88■■■■□ 3.17
NAE1-201ENST00000290810 WIZO95785 1651 aa34.75■■■■□ 3.15
NAE1-201ENST00000290810 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
NAE1-201ENST00000290810 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
NAE1-201ENST00000290810 SMARCA2P51531 1590 aa34.28■■■■□ 3.08
NAE1-201ENST00000290810 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
NAE1-201ENST00000290810 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.07
NAE1-201ENST00000290810 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
NAE1-201ENST00000290810 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
NAE1-201ENST00000290810 CCDC88BA6NC98 1476 aa34.04■■■■□ 3.04
NAE1-201ENST00000290810 NCAPD3P42695 1498 aa33.98■■■■□ 3.03
NAE1-201ENST00000290810 HMGXB3Q12766 1538 aa33.98■■■■□ 3.03
NAE1-201ENST00000290810 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
NAE1-201ENST00000290810 TRIM41Q8WV44 630 aa33.5■■■□□ 2.95
NAE1-201ENST00000290810 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
NAE1-201ENST00000290810 CFTRP13569 1480 aa33.25■■■□□ 2.91
NAE1-201ENST00000290810 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.9
NAE1-201ENST00000290810 PRDM2Q13029 1718 aa33.14■■■□□ 2.9
NAE1-201ENST00000290810 CADPSQ9ULU8 1353 aa33.08■■■□□ 2.89
NAE1-201ENST00000290810 SYNJ1O43426 1573 aa33.02■■■□□ 2.88
NAE1-201ENST00000290810 TOP2BQ02880 1626 aa32.92■■■□□ 2.86
NAE1-201ENST00000290810 BIVM-ERCC5R4GMW8 1640 aa32.9■■■□□ 2.86
NAE1-201ENST00000290810 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
NAE1-201ENST00000290810 EEA1Q15075 1411 aa32.8■■■□□ 2.84
NAE1-201ENST00000290810 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
NAE1-201ENST00000290810 FAM9AQ8IZU1 332 aaPredicted RBP32.79■■■□□ 2.84
NAE1-201ENST00000290810 CUX1P39880 1505 aa32.76■■■□□ 2.84
NAE1-201ENST00000290810 SOGA1O94964 1423 aa32.72■■■□□ 2.83
NAE1-201ENST00000290810 DNAJC5BQ9UF47 199 aa32.7■■■□□ 2.83
NAE1-201ENST00000290810 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.83
NAE1-201ENST00000290810 NESP48681 1621 aa32.69■■■□□ 2.82
NAE1-201ENST00000290810 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
NAE1-201ENST00000290810 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
NAE1-201ENST00000290810 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
NAE1-201ENST00000290810 CEP164Q9UPV0 1460 aa32.5■■■□□ 2.79
NAE1-201ENST00000290810 DNMBPQ6XZF7 1577 aa32.47■■■□□ 2.79
NAE1-201ENST00000290810 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
NAE1-201ENST00000290810 TOPBP1Q92547 1522 aa32.38■■■□□ 2.77
NAE1-201ENST00000290810 KIF21BO75037 1637 aa32.36■■■□□ 2.77
NAE1-201ENST00000290810 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
NAE1-201ENST00000290810 KIF27Q86VH2 1401 aa32.32■■■□□ 2.76
NAE1-201ENST00000290810 GOLGA3Q08378 1498 aa32.3■■■□□ 2.76
NAE1-201ENST00000290810 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
NAE1-201ENST00000290810 EHMT2Q96KQ7 1210 aa32.23■■■□□ 2.75
NAE1-201ENST00000290810 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
NAE1-201ENST00000290810 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
NAE1-201ENST00000290810 CUX2O14529 1486 aa32.17■■■□□ 2.74
NAE1-201ENST00000290810 PRXQ9BXM0 1461 aa32.15■■■□□ 2.74
NAE1-201ENST00000290810 ERICH3Q5RHP9 1530 aa32.14■■■□□ 2.74
NAE1-201ENST00000290810 ABCA10Q8WWZ4 1543 aa32.14■■■□□ 2.74
NAE1-201ENST00000290810 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
NAE1-201ENST00000290810 RAPGEF2Q9Y4G8 1499 aa32.09■■■□□ 2.73
NAE1-201ENST00000290810 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
NAE1-201ENST00000290810 RAD54L2Q9Y4B4 1467 aa32.06■■■□□ 2.72
NAE1-201ENST00000290810 UBTFP17480 764 aaKnown RBP32.03■■■□□ 2.72
NAE1-201ENST00000290810 CEP162Q5TB80 1403 aa32.03■■■□□ 2.72
NAE1-201ENST00000290810 IGF1RP08069 1367 aa31.99■■■□□ 2.71
NAE1-201ENST00000290810 WDR62O43379 1518 aa31.96■■■□□ 2.71
NAE1-201ENST00000290810 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
NAE1-201ENST00000290810 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
NAE1-201ENST00000290810 ERCC6Q03468 1493 aa31.89■■■□□ 2.69
NAE1-201ENST00000290810 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
NAE1-201ENST00000290810 CUL7Q14999 1698 aa31.82■■■□□ 2.68
NAE1-201ENST00000290810 CARMIL1Q5VZK9 1371 aa31.82■■■□□ 2.68
NAE1-201ENST00000290810 GAPVD1Q14C86 1478 aa31.76■■■□□ 2.67
NAE1-201ENST00000290810 CLIP1P30622 1438 aa31.75■■■□□ 2.67
NAE1-201ENST00000290810 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
NAE1-201ENST00000290810 TDRD9Q8NDG6 1382 aaKnown RBP31.72■■■□□ 2.67
NAE1-201ENST00000290810 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
NAE1-201ENST00000290810 VPS8Q8N3P4 1428 aa31.53■■■□□ 2.64
NAE1-201ENST00000290810 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.644e-7■■■■□ 20.2
NAE1-201ENST00000290810 GRIN2BQ13224 1484 aa31.51■■■□□ 2.64
NAE1-201ENST00000290810 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
NAE1-201ENST00000290810 TRIM26Q12899 539 aaPredicted RBP31.47■■■□□ 2.63
NAE1-201ENST00000290810 CTTNBP2Q8WZ74 1663 aa31.47■■■□□ 2.63
NAE1-201ENST00000290810 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
NAE1-201ENST00000290810 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
NAE1-201ENST00000290810 ARAP1Q96P48 1450 aa31.45■■■□□ 2.62
NAE1-201ENST00000290810 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
NAE1-201ENST00000290810 ARHGAP35Q9NRY4 1499 aa31.43■■■□□ 2.62
NAE1-201ENST00000290810 PCGF6Q9BYE7 350 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms