RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
RPS4X-201ENST00000316084 ABCC9O60706 1549 aa20.15■□□□□ 0.82
RPS4X-201ENST00000316084 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
RPS4X-201ENST00000316084 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
RPS4X-201ENST00000316084 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
RPS4X-201ENST00000316084 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPS4X-201ENST00000316084 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
RPS4X-201ENST00000316084 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
RPS4X-201ENST00000316084 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
RPS4X-201ENST00000316084 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
RPS4X-201ENST00000316084 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
RPS4X-201ENST00000316084 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
RPS4X-201ENST00000316084 CUX2O14529 1486 aa18■□□□□ 0.47
RPS4X-201ENST00000316084 NACADO15069 1562 aa17.93■□□□□ 0.46
RPS4X-201ENST00000316084 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
RPS4X-201ENST00000316084 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
RPS4X-201ENST00000316084 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
RPS4X-201ENST00000316084 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
RPS4X-201ENST00000316084 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
RPS4X-201ENST00000316084 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.36
RPS4X-201ENST00000316084 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
RPS4X-201ENST00000316084 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
RPS4X-201ENST00000316084 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
RPS4X-201ENST00000316084 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
RPS4X-201ENST00000316084 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
RPS4X-201ENST00000316084 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
RPS4X-201ENST00000316084 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
RPS4X-201ENST00000316084 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
RPS4X-201ENST00000316084 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
RPS4X-201ENST00000316084 NESP48681 1621 aa16.87■□□□□ 0.29
RPS4X-201ENST00000316084 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
RPS4X-201ENST00000316084 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
RPS4X-201ENST00000316084 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
RPS4X-201ENST00000316084 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
RPS4X-201ENST00000316084 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
RPS4X-201ENST00000316084 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
RPS4X-201ENST00000316084 WDR62O43379 1518 aa16.41■□□□□ 0.22
RPS4X-201ENST00000316084 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
RPS4X-201ENST00000316084 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
RPS4X-201ENST00000316084 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
RPS4X-201ENST00000316084 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
RPS4X-201ENST00000316084 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
RPS4X-201ENST00000316084 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
RPS4X-201ENST00000316084 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
RPS4X-201ENST00000316084 SOCS7O14512 581 aa16.21■□□□□ 0.19
RPS4X-201ENST00000316084 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
RPS4X-201ENST00000316084 FBXO41Q8TF61 875 aa16.16■□□□□ 0.18
RPS4X-201ENST00000316084 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.18
RPS4X-201ENST00000316084 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
RPS4X-201ENST00000316084 ILDR2Q71H61 639 aa16.07■□□□□ 0.16
RPS4X-201ENST00000316084 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
RPS4X-201ENST00000316084 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
RPS4X-201ENST00000316084 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
RPS4X-201ENST00000316084 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
RPS4X-201ENST00000316084 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
RPS4X-201ENST00000316084 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
RPS4X-201ENST00000316084 CHD1O14646 1710 aa15.94■□□□□ 0.14
RPS4X-201ENST00000316084 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
RPS4X-201ENST00000316084 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
RPS4X-201ENST00000316084 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
RPS4X-201ENST00000316084 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
RPS4X-201ENST00000316084 KIF13AQ9H1H9 1805 aa15.76■□□□□ 0.11
RPS4X-201ENST00000316084 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
RPS4X-201ENST00000316084 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
RPS4X-201ENST00000316084 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
RPS4X-201ENST00000316084 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
RPS4X-201ENST00000316084 FBLN2P98095 1184 aa15.72■□□□□ 0.11
RPS4X-201ENST00000316084 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
RPS4X-201ENST00000316084 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
RPS4X-201ENST00000316084 ADGRL1O94910 1474 aa15.63■□□□□ 0.09
RPS4X-201ENST00000316084 KDM6BO15054 1643 aa15.59■□□□□ 0.09
RPS4X-201ENST00000316084 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.088e-8■■■■□ 23.7
RPS4X-201ENST00000316084 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
RPS4X-201ENST00000316084 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
RPS4X-201ENST00000316084 CFTRP13569 1480 aa15.48■□□□□ 0.07
RPS4X-201ENST00000316084 FAM69CQ0P6D2 419 aa15.42■□□□□ 0.06
RPS4X-201ENST00000316084 MROH2BQ7Z745 1585 aa15.39■□□□□ 0.05
RPS4X-201ENST00000316084 ABCC10Q5T3U5 1492 aa15.37■□□□□ 0.05
RPS4X-201ENST00000316084 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
RPS4X-201ENST00000316084 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
RPS4X-201ENST00000316084 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
RPS4X-201ENST00000316084 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
RPS4X-201ENST00000316084 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
RPS4X-201ENST00000316084 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
RPS4X-201ENST00000316084 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
RPS4X-201ENST00000316084 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
RPS4X-201ENST00000316084 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
RPS4X-201ENST00000316084 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
RPS4X-201ENST00000316084 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
RPS4X-201ENST00000316084 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
RPS4X-201ENST00000316084 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
RPS4X-201ENST00000316084 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
RPS4X-201ENST00000316084 CEP170Q5SW79 1584 aa15.13■□□□□ 0.01
RPS4X-201ENST00000316084 WIZO95785 1651 aa15.12■□□□□ 0.01
RPS4X-201ENST00000316084 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
RPS4X-201ENST00000316084 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
RPS4X-201ENST00000316084 NPM1P06748 294 aaKnown RBP eCLIP15.05■□□□□ -0
RPS4X-201ENST00000316084 WDR97A6NE52 1622 aa15.04■□□□□ -0
RPS4X-201ENST00000316084 GRIN2BQ13224 1484 aa15.03■□□□□ -0
RPS4X-201ENST00000316084 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms