RNA–Protein interactions for RNA: ENST00000394074.6

NAE1-204, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5 BASIC

Gene NAE1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-204ENST00000394074 NISCHQ9Y2I1 1504 aa52.48■■■■■ 5.99
NAE1-204ENST00000394074 CCDC180Q9P1Z9 1646 aa46.24■■■■■ 4.99
NAE1-204ENST00000394074 ABCC9O60706 1549 aa44.61■■■■■ 4.73
NAE1-204ENST00000394074 ZCCHC6Q5VYS8 1495 aaKnown RBP43.87■■■■■ 4.61
NAE1-204ENST00000394074 DCAF8L2P0C7V8 631 aa43.7■■■■■ 4.59
NAE1-204ENST00000394074 DCAF1Q9Y4B6 1507 aa43.4■■■■■ 4.54
NAE1-204ENST00000394074 NACADO15069 1562 aa43.33■■■■■ 4.53
NAE1-204ENST00000394074 MYO15BQ96JP2 1530 aa43.28■■■■■ 4.52
NAE1-204ENST00000394074 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
NAE1-204ENST00000394074 SCRIBQ14160 1630 aa42.36■■■■■ 4.37
NAE1-204ENST00000394074 UNC13AQ9UPW8 1703 aa42.19■■■■■ 4.34
NAE1-204ENST00000394074 SHROOM4Q9ULL8 1493 aa42.08■■■■■ 4.33
NAE1-204ENST00000394074 PABPN1Q86U42 306 aaKnown RBP eCLIP41.87■■■■■ 4.29
NAE1-204ENST00000394074 BICRAQ9NZM4 1560 aa41.83■■■■■ 4.29
NAE1-204ENST00000394074 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
NAE1-204ENST00000394074 EIF4G1Q04637 1599 aaKnown RBP40.7■■■■■ 4.11
NAE1-204ENST00000394074 BAZ1AQ9NRL2 1556 aaPredicted RBP40.63■■■■■ 4.09
NAE1-204ENST00000394074 SMARCA4P51532 1647 aa40.54■■■■■ 4.08
NAE1-204ENST00000394074 MROH2BQ7Z745 1585 aa40.48■■■■■ 4.07
NAE1-204ENST00000394074 CC2D2AQ9P2K1 1620 aa40.34■■■■■ 4.05
NAE1-204ENST00000394074 RSF1Q96T23 1441 aaPredicted RBP40.31■■■■■ 4.04
NAE1-204ENST00000394074 DNAJC5BQ9UF47 199 aa40.21■■■■■ 4.03
NAE1-204ENST00000394074 ATAD2BQ9ULI0 1458 aa40.14■■■■■ 4.02
NAE1-204ENST00000394074 SMARCA2P51531 1590 aa40.12■■■■■ 4.01
NAE1-204ENST00000394074 PEG3Q9GZU2 1588 aa40.09■■■■■ 4.01
NAE1-204ENST00000394074 WIZO95785 1651 aa40.08■■■■■ 4.01
NAE1-204ENST00000394074 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
NAE1-204ENST00000394074 NCAPD3P42695 1498 aa39.98■■■■□ 3.99
NAE1-204ENST00000394074 BAZ1BQ9UIG0 1483 aaKnown RBP39.87■■■■□ 3.97
NAE1-204ENST00000394074 HMGXB3Q12766 1538 aa39.83■■■■□ 3.97
NAE1-204ENST00000394074 TOP2AP11388 1531 aaKnown RBP39.68■■■■□ 3.94
NAE1-204ENST00000394074 CCDC88BA6NC98 1476 aa39.24■■■■□ 3.87
NAE1-204ENST00000394074 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
NAE1-204ENST00000394074 NESP48681 1621 aa38.82■■■■□ 3.81
NAE1-204ENST00000394074 CFTRP13569 1480 aa38.81■■■■□ 3.8
NAE1-204ENST00000394074 LAMC3Q9Y6N6 1575 aa38.8■■■■□ 3.8
NAE1-204ENST00000394074 PDS5BQ9NTI5 1447 aa38.55■■■■□ 3.76
NAE1-204ENST00000394074 PRDM2Q13029 1718 aa38.51■■■■□ 3.76
NAE1-204ENST00000394074 FANCD2Q9BXW9 1451 aa38.45■■■■□ 3.75
NAE1-204ENST00000394074 ERCC6Q03468 1493 aa38.4■■■■□ 3.74
NAE1-204ENST00000394074 KIF21AQ7Z4S6 1674 aa38.34■■■■□ 3.73
NAE1-204ENST00000394074 CEP164Q9UPV0 1460 aa38.33■■■■□ 3.73
NAE1-204ENST00000394074 MRC2Q9UBG0 1479 aa38.08■■■■□ 3.69
NAE1-204ENST00000394074 ABCC8Q09428 1581 aa38.08■■■■□ 3.69
NAE1-204ENST00000394074 WRNQ14191 1432 aaPredicted RBP eCLIP38.01■■■■□ 3.68
NAE1-204ENST00000394074 URB2Q14146 1524 aaKnown RBP38■■■■□ 3.67
NAE1-204ENST00000394074 THOC2Q8NI27 1593 aaKnown RBP38■■■■□ 3.67
NAE1-204ENST00000394074 CUX1P39880 1505 aa37.92■■■■□ 3.66
NAE1-204ENST00000394074 DNMBPQ6XZF7 1577 aa37.92■■■■□ 3.66
NAE1-204ENST00000394074 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
NAE1-204ENST00000394074 WDR62O43379 1518 aa37.9■■■■□ 3.66
NAE1-204ENST00000394074 SYNJ1O43426 1573 aa37.84■■■■□ 3.65
NAE1-204ENST00000394074 TOP2BQ02880 1626 aa37.79■■■■□ 3.64
NAE1-204ENST00000394074 BIVM-ERCC5R4GMW8 1640 aa37.76■■■■□ 3.63
NAE1-204ENST00000394074 CHIC1Q5VXU3 224 aa37.76■■■■□ 3.63
NAE1-204ENST00000394074 TRIM41Q8WV44 630 aa37.73■■■■□ 3.63
NAE1-204ENST00000394074 FGD5Q6ZNL6 1462 aa37.68■■■■□ 3.62
NAE1-204ENST00000394074 POLA1P09884 1462 aaPredicted RBP37.65■■■■□ 3.62
NAE1-204ENST00000394074 CUX2O14529 1486 aa37.62■■■■□ 3.61
NAE1-204ENST00000394074 SOGA1O94964 1423 aa37.53■■■■□ 3.6
NAE1-204ENST00000394074 RAD54L2Q9Y4B4 1467 aa37.5■■■■□ 3.59
NAE1-204ENST00000394074 IFT140Q96RY7 1462 aa37.47■■■■□ 3.59
NAE1-204ENST00000394074 TARBP1Q13395 1621 aaKnown RBP37.41■■■■□ 3.58
NAE1-204ENST00000394074 ABCA10Q8WWZ4 1543 aa37.33■■■■□ 3.57
NAE1-204ENST00000394074 WDR97A6NE52 1622 aa37.26■■■■□ 3.55
NAE1-204ENST00000394074 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.55
NAE1-204ENST00000394074 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
NAE1-204ENST00000394074 AQRO60306 1485 aaKnown RBP eCLIP37.17■■■■□ 3.544e-7■■■■□ 20.2
NAE1-204ENST00000394074 KIF27Q86VH2 1401 aa37.15■■■■□ 3.54
NAE1-204ENST00000394074 EIF4G3O43432 1585 aaKnown RBP37.11■■■■□ 3.53
NAE1-204ENST00000394074 GAPVD1Q14C86 1478 aa37.1■■■■□ 3.53
NAE1-204ENST00000394074 ABCA5Q8WWZ7 1642 aa37.09■■■■□ 3.53
NAE1-204ENST00000394074 RUSC2Q8N2Y8 1516 aa37.06■■■■□ 3.52
NAE1-204ENST00000394074 FAM9AQ8IZU1 332 aaPredicted RBP36.98■■■■□ 3.51
NAE1-204ENST00000394074 GRIN2BQ13224 1484 aa36.98■■■■□ 3.51
NAE1-204ENST00000394074 EEA1Q15075 1411 aa36.95■■■■□ 3.51
NAE1-204ENST00000394074 PBRM1Q86U86 1689 aa36.92■■■■□ 3.5
NAE1-204ENST00000394074 IGF1RP08069 1367 aa36.89■■■■□ 3.5
NAE1-204ENST00000394074 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
NAE1-204ENST00000394074 CSRNP3Q8WYN3 585 aa36.84■■■■□ 3.49
NAE1-204ENST00000394074 SNAPC4Q5SXM2 1469 aa36.83■■■■□ 3.49
NAE1-204ENST00000394074 MAGI1Q96QZ7 1491 aaPredicted RBP36.78■■■■□ 3.48
NAE1-204ENST00000394074 CARMIL1Q5VZK9 1371 aa36.71■■■■□ 3.47
NAE1-204ENST00000394074 CUL7Q14999 1698 aa36.71■■■■□ 3.47
NAE1-204ENST00000394074 FHAD1B1AJZ9 1412 aa36.7■■■■□ 3.47
NAE1-204ENST00000394074 ADAMTS12P58397 1594 aa36.69■■■■□ 3.46
NAE1-204ENST00000394074 FBLN2P98095 1184 aa36.65■■■■□ 3.46
NAE1-204ENST00000394074 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
NAE1-204ENST00000394074 SYNJ2O15056 1496 aa36.64■■■■□ 3.46
NAE1-204ENST00000394074 PRXQ9BXM0 1461 aa36.61■■■■□ 3.45
NAE1-204ENST00000394074 RAPGEF2Q9Y4G8 1499 aa36.56■■■■□ 3.44
NAE1-204ENST00000394074 GRIN2AQ12879 1464 aa36.5■■■■□ 3.43
NAE1-204ENST00000394074 CHD1O14646 1710 aa36.49■■■■□ 3.43
NAE1-204ENST00000394074 KIF21BO75037 1637 aa36.48■■■■□ 3.43
NAE1-204ENST00000394074 EHMT2Q96KQ7 1210 aa36.48■■■■□ 3.43
NAE1-204ENST00000394074 GOLGA3Q08378 1498 aa36.38■■■■□ 3.41
NAE1-204ENST00000394074 OSCARQ8IYS5 282 aa36.3■■■■□ 3.4
NAE1-204ENST00000394074 UBTFP17480 764 aaKnown RBP36.29■■■■□ 3.4
NAE1-204ENST00000394074 NUP160Q12769 1436 aa36.29■■■■□ 3.4
NAE1-204ENST00000394074 CEP170Q5SW79 1584 aa36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms