RNA–Protein interactions for RNA: ENST00000517679.5

TBCA-203, Transcript of tubulin folding cofactor A, humanhuman

TSL 3 BASIC

Gene TBCA, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCA-203ENST00000517679 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
TBCA-203ENST00000517679 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
TBCA-203ENST00000517679 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
TBCA-203ENST00000517679 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
TBCA-203ENST00000517679 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
TBCA-203ENST00000517679 FOXD1Q16676 465 aa19.77■□□□□ 0.76
TBCA-203ENST00000517679 MSH5O43196 834 aa18.86■□□□□ 0.61
TBCA-203ENST00000517679 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
TBCA-203ENST00000517679 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
TBCA-203ENST00000517679 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
TBCA-203ENST00000517679 ADRA2BP18089 450 aa18.03■□□□□ 0.48
TBCA-203ENST00000517679 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
TBCA-203ENST00000517679 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
TBCA-203ENST00000517679 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
TBCA-203ENST00000517679 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
TBCA-203ENST00000517679 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
TBCA-203ENST00000517679 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
TBCA-203ENST00000517679 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
TBCA-203ENST00000517679 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
TBCA-203ENST00000517679 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
TBCA-203ENST00000517679 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
TBCA-203ENST00000517679 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
TBCA-203ENST00000517679 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
TBCA-203ENST00000517679 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
TBCA-203ENST00000517679 POTEHQ6S545 545 aa15.45■□□□□ 0.06
TBCA-203ENST00000517679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.035e-8■■■□□ 17.8
TBCA-203ENST00000517679 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
TBCA-203ENST00000517679 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
TBCA-203ENST00000517679 CAPN15O75808 1086 aa14.7□□□□□ -0.06
TBCA-203ENST00000517679 DSG3P32926 999 aa14.68□□□□□ -0.06
TBCA-203ENST00000517679 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
TBCA-203ENST00000517679 KCNA4P22459 653 aa14.63□□□□□ -0.07
TBCA-203ENST00000517679 APLP2Q06481 763 aa14.63□□□□□ -0.07
TBCA-203ENST00000517679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
TBCA-203ENST00000517679 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
TBCA-203ENST00000517679 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
TBCA-203ENST00000517679 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
TBCA-203ENST00000517679 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
TBCA-203ENST00000517679 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
TBCA-203ENST00000517679 ABCB7O75027 752 aa14.26□□□□□ -0.13
TBCA-203ENST00000517679 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
TBCA-203ENST00000517679 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
TBCA-203ENST00000517679 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
TBCA-203ENST00000517679 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
TBCA-203ENST00000517679 POLA2Q14181 598 aa13.95□□□□□ -0.18
TBCA-203ENST00000517679 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
TBCA-203ENST00000517679 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
TBCA-203ENST00000517679 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
TBCA-203ENST00000517679 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
TBCA-203ENST00000517679 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
TBCA-203ENST00000517679 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
TBCA-203ENST00000517679 ATXN8OSP0DMR3 200 aa13.51□□□□□ -0.25
TBCA-203ENST00000517679 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
TBCA-203ENST00000517679 HAX1O00165 279 aa13.49□□□□□ -0.25
TBCA-203ENST00000517679 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
TBCA-203ENST00000517679 ZBTB22O15209 634 aa13.39□□□□□ -0.27
TBCA-203ENST00000517679 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.274e-6■□□□□ 11
TBCA-203ENST00000517679 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
TBCA-203ENST00000517679 FBLN2P98095 1184 aa13.33□□□□□ -0.28
TBCA-203ENST00000517679 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
TBCA-203ENST00000517679 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
TBCA-203ENST00000517679 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
TBCA-203ENST00000517679 EVX2Q03828 476 aa13.31□□□□□ -0.28
TBCA-203ENST00000517679 LHX8Q68G74 356 aa13.15□□□□□ -0.3
TBCA-203ENST00000517679 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
TBCA-203ENST00000517679 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
TBCA-203ENST00000517679 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
TBCA-203ENST00000517679 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
TBCA-203ENST00000517679 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
TBCA-203ENST00000517679 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
TBCA-203ENST00000517679 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
TBCA-203ENST00000517679 GABBR2O75899 941 aa12.96□□□□□ -0.33
TBCA-203ENST00000517679 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
TBCA-203ENST00000517679 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
TBCA-203ENST00000517679 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
TBCA-203ENST00000517679 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
TBCA-203ENST00000517679 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
TBCA-203ENST00000517679 CLCN6P51797 869 aa12.69□□□□□ -0.38
TBCA-203ENST00000517679 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
TBCA-203ENST00000517679 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
TBCA-203ENST00000517679 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
TBCA-203ENST00000517679 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
TBCA-203ENST00000517679 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
TBCA-203ENST00000517679 POTEMA6NI47 508 aa12.43□□□□□ -0.42
TBCA-203ENST00000517679 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
TBCA-203ENST00000517679 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
TBCA-203ENST00000517679 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
TBCA-203ENST00000517679 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
TBCA-203ENST00000517679 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
TBCA-203ENST00000517679 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
TBCA-203ENST00000517679 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
TBCA-203ENST00000517679 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
TBCA-203ENST00000517679 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
TBCA-203ENST00000517679 EHMT2Q96KQ7 1210 aa12.3□□□□□ -0.44
TBCA-203ENST00000517679 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
TBCA-203ENST00000517679 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
TBCA-203ENST00000517679 MNX1P50219 401 aaPredicted RBP12.15□□□□□ -0.46
TBCA-203ENST00000517679 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
TBCA-203ENST00000517679 PROM2Q8N271 834 aa12.08□□□□□ -0.48
TBCA-203ENST00000517679 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms