RNA–Protein interactions for RNA: ENST00000373626.4

RPS4X-202, Transcript of ribosomal protein S4 X-linked, humanhuman

TSL 3

Gene RPS4X, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-202ENST00000373626 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
RPS4X-202ENST00000373626 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
RPS4X-202ENST00000373626 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
RPS4X-202ENST00000373626 ABCC9O60706 1549 aa16.55■□□□□ 0.24
RPS4X-202ENST00000373626 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
RPS4X-202ENST00000373626 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
RPS4X-202ENST00000373626 NACADO15069 1562 aa16.34■□□□□ 0.21
RPS4X-202ENST00000373626 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
RPS4X-202ENST00000373626 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
RPS4X-202ENST00000373626 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
RPS4X-202ENST00000373626 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
RPS4X-202ENST00000373626 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
RPS4X-202ENST00000373626 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
RPS4X-202ENST00000373626 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
RPS4X-202ENST00000373626 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
RPS4X-202ENST00000373626 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
RPS4X-202ENST00000373626 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
RPS4X-202ENST00000373626 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
RPS4X-202ENST00000373626 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
RPS4X-202ENST00000373626 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
RPS4X-202ENST00000373626 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
RPS4X-202ENST00000373626 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
RPS4X-202ENST00000373626 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
RPS4X-202ENST00000373626 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
RPS4X-202ENST00000373626 WIZO95785 1651 aa15.1■□□□□ 0.01
RPS4X-202ENST00000373626 NCAPD3P42695 1498 aa15.08■□□□□ 0
RPS4X-202ENST00000373626 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
RPS4X-202ENST00000373626 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
RPS4X-202ENST00000373626 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
RPS4X-202ENST00000373626 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
RPS4X-202ENST00000373626 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
RPS4X-202ENST00000373626 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
RPS4X-202ENST00000373626 CFTRP13569 1480 aa14.65□□□□□ -0.06
RPS4X-202ENST00000373626 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
RPS4X-202ENST00000373626 LAMC3Q9Y6N6 1575 aa14.59□□□□□ -0.07
RPS4X-202ENST00000373626 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
RPS4X-202ENST00000373626 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
RPS4X-202ENST00000373626 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
RPS4X-202ENST00000373626 NESP48681 1621 aa14.45□□□□□ -0.1
RPS4X-202ENST00000373626 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
RPS4X-202ENST00000373626 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
RPS4X-202ENST00000373626 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
RPS4X-202ENST00000373626 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
RPS4X-202ENST00000373626 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
RPS4X-202ENST00000373626 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
RPS4X-202ENST00000373626 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
RPS4X-202ENST00000373626 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
RPS4X-202ENST00000373626 CUX1P39880 1505 aa14.3□□□□□ -0.12
RPS4X-202ENST00000373626 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
RPS4X-202ENST00000373626 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
RPS4X-202ENST00000373626 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
RPS4X-202ENST00000373626 TOPBP1Q92547 1522 aa14.25□□□□□ -0.13
RPS4X-202ENST00000373626 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
RPS4X-202ENST00000373626 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
RPS4X-202ENST00000373626 WDR62O43379 1518 aa14.2□□□□□ -0.14
RPS4X-202ENST00000373626 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
RPS4X-202ENST00000373626 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
RPS4X-202ENST00000373626 EEA1Q15075 1411 aa14.16□□□□□ -0.14
RPS4X-202ENST00000373626 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
RPS4X-202ENST00000373626 SOGA1O94964 1423 aa14.14□□□□□ -0.15
RPS4X-202ENST00000373626 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
RPS4X-202ENST00000373626 KIF27Q86VH2 1401 aa14.08□□□□□ -0.15
RPS4X-202ENST00000373626 CUX2O14529 1486 aa14.08□□□□□ -0.16
RPS4X-202ENST00000373626 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
RPS4X-202ENST00000373626 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
RPS4X-202ENST00000373626 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
RPS4X-202ENST00000373626 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
RPS4X-202ENST00000373626 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
RPS4X-202ENST00000373626 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
RPS4X-202ENST00000373626 IGF1RP08069 1367 aa13.98□□□□□ -0.17
RPS4X-202ENST00000373626 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
RPS4X-202ENST00000373626 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
RPS4X-202ENST00000373626 GAPVD1Q14C86 1478 aa13.97□□□□□ -0.17
RPS4X-202ENST00000373626 ERICH3Q5RHP9 1530 aa13.96□□□□□ -0.17
RPS4X-202ENST00000373626 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.18
RPS4X-202ENST00000373626 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
RPS4X-202ENST00000373626 KIF21BO75037 1637 aa13.92□□□□□ -0.18
RPS4X-202ENST00000373626 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
RPS4X-202ENST00000373626 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
RPS4X-202ENST00000373626 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.189e-8■■■■□ 24
RPS4X-202ENST00000373626 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
RPS4X-202ENST00000373626 CUL7Q14999 1698 aa13.9□□□□□ -0.18
RPS4X-202ENST00000373626 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
RPS4X-202ENST00000373626 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
RPS4X-202ENST00000373626 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
RPS4X-202ENST00000373626 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
RPS4X-202ENST00000373626 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
RPS4X-202ENST00000373626 FHAD1B1AJZ9 1412 aa13.85□□□□□ -0.19
RPS4X-202ENST00000373626 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
RPS4X-202ENST00000373626 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
RPS4X-202ENST00000373626 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
RPS4X-202ENST00000373626 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
RPS4X-202ENST00000373626 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
RPS4X-202ENST00000373626 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
RPS4X-202ENST00000373626 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
RPS4X-202ENST00000373626 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
RPS4X-202ENST00000373626 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
RPS4X-202ENST00000373626 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
RPS4X-202ENST00000373626 NUP160Q12769 1436 aa13.66□□□□□ -0.22
RPS4X-202ENST00000373626 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms