RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
PABPC1-204ENST00000517990 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
PABPC1-204ENST00000517990 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
PABPC1-204ENST00000517990 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
PABPC1-204ENST00000517990 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
PABPC1-204ENST00000517990 FOXD1Q16676 465 aa18.23■□□□□ 0.51
PABPC1-204ENST00000517990 MSH5O43196 834 aa17.55■□□□□ 0.4
PABPC1-204ENST00000517990 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-204ENST00000517990 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
PABPC1-204ENST00000517990 ADRA2BP18089 450 aa16.01■□□□□ 0.15
PABPC1-204ENST00000517990 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-204ENST00000517990 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
PABPC1-204ENST00000517990 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
PABPC1-204ENST00000517990 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
PABPC1-204ENST00000517990 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
PABPC1-204ENST00000517990 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
PABPC1-204ENST00000517990 POTEHQ6S545 545 aa14.79□□□□□ -0.04
PABPC1-204ENST00000517990 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
PABPC1-204ENST00000517990 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
PABPC1-204ENST00000517990 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
PABPC1-204ENST00000517990 ABCC9O60706 1549 aa14.32□□□□□ -0.12
PABPC1-204ENST00000517990 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-204ENST00000517990 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
PABPC1-204ENST00000517990 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
PABPC1-204ENST00000517990 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-204ENST00000517990 RB1CC1Q8TDY2 1594 aa13.59□□□□□ -0.23
PABPC1-204ENST00000517990 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
PABPC1-204ENST00000517990 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
PABPC1-204ENST00000517990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
PABPC1-204ENST00000517990 DSG3P32926 999 aa13.5□□□□□ -0.25
PABPC1-204ENST00000517990 NACADO15069 1562 aa13.45□□□□□ -0.26
PABPC1-204ENST00000517990 CAPN15O75808 1086 aa13.34□□□□□ -0.27
PABPC1-204ENST00000517990 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
PABPC1-204ENST00000517990 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-204ENST00000517990 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
PABPC1-204ENST00000517990 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-204ENST00000517990 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
PABPC1-204ENST00000517990 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
PABPC1-204ENST00000517990 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
PABPC1-204ENST00000517990 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
PABPC1-204ENST00000517990 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-204ENST00000517990 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
PABPC1-204ENST00000517990 CECR2Q9BXF3 1484 aa12.96□□□□□ -0.34
PABPC1-204ENST00000517990 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
PABPC1-204ENST00000517990 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
PABPC1-204ENST00000517990 ABCB7O75027 752 aa12.91□□□□□ -0.34
PABPC1-204ENST00000517990 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
PABPC1-204ENST00000517990 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
PABPC1-204ENST00000517990 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
PABPC1-204ENST00000517990 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
PABPC1-204ENST00000517990 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-204ENST00000517990 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
PABPC1-204ENST00000517990 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-204ENST00000517990 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
PABPC1-204ENST00000517990 HAX1O00165 279 aa12.69□□□□□ -0.38
PABPC1-204ENST00000517990 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
PABPC1-204ENST00000517990 APLP2Q06481 763 aa12.63□□□□□ -0.39
PABPC1-204ENST00000517990 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
PABPC1-204ENST00000517990 CUX2O14529 1486 aa12.5□□□□□ -0.41
PABPC1-204ENST00000517990 LHX8Q68G74 356 aa12.47□□□□□ -0.41
PABPC1-204ENST00000517990 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
PABPC1-204ENST00000517990 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
PABPC1-204ENST00000517990 EVX2Q03828 476 aa12.38□□□□□ -0.43
PABPC1-204ENST00000517990 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
PABPC1-204ENST00000517990 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
PABPC1-204ENST00000517990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-204ENST00000517990 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
PABPC1-204ENST00000517990 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PABPC1-204ENST00000517990 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
PABPC1-204ENST00000517990 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
PABPC1-204ENST00000517990 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
PABPC1-204ENST00000517990 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-204ENST00000517990 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
PABPC1-204ENST00000517990 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.46
PABPC1-204ENST00000517990 NESP48681 1621 aa12.2□□□□□ -0.46
PABPC1-204ENST00000517990 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
PABPC1-204ENST00000517990 POLA2Q14181 598 aa12.19□□□□□ -0.46
PABPC1-204ENST00000517990 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-204ENST00000517990 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-204ENST00000517990 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
PABPC1-204ENST00000517990 THOC2Q8NI27 1593 aaKnown RBP12.15□□□□□ -0.46
PABPC1-204ENST00000517990 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
PABPC1-204ENST00000517990 PDS5BQ9NTI5 1447 aa12.13□□□□□ -0.47
PABPC1-204ENST00000517990 PEG3Q9GZU2 1588 aa12.11□□□□□ -0.47
PABPC1-204ENST00000517990 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
PABPC1-204ENST00000517990 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
PABPC1-204ENST00000517990 GABBR2O75899 941 aa12.06□□□□□ -0.48
PABPC1-204ENST00000517990 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
PABPC1-204ENST00000517990 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
PABPC1-204ENST00000517990 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
PABPC1-204ENST00000517990 WDR62O43379 1518 aa11.96□□□□□ -0.5
PABPC1-204ENST00000517990 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
PABPC1-204ENST00000517990 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
PABPC1-204ENST00000517990 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
PABPC1-204ENST00000517990 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
PABPC1-204ENST00000517990 WIZO95785 1651 aa11.85□□□□□ -0.51
PABPC1-204ENST00000517990 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-204ENST00000517990 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
PABPC1-204ENST00000517990 POTEMA6NI47 508 aa11.82□□□□□ -0.52
PABPC1-204ENST00000517990 CFTRP13569 1480 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms