RNA–Protein interactions for RNA: ENST00000486733.2

RPS4X-204, Transcript of ribosomal protein S4 X-linked, humanhuman

TSL 5

Gene RPS4X, Length 1,820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-204ENST00000486733 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
RPS4X-204ENST00000486733 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
RPS4X-204ENST00000486733 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
RPS4X-204ENST00000486733 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
RPS4X-204ENST00000486733 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
RPS4X-204ENST00000486733 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
RPS4X-204ENST00000486733 ABCC9O60706 1549 aa15.48■□□□□ 0.07
RPS4X-204ENST00000486733 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
RPS4X-204ENST00000486733 NACADO15069 1562 aa15.31■□□□□ 0.04
RPS4X-204ENST00000486733 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
RPS4X-204ENST00000486733 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
RPS4X-204ENST00000486733 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
RPS4X-204ENST00000486733 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
RPS4X-204ENST00000486733 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
RPS4X-204ENST00000486733 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
RPS4X-204ENST00000486733 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPS4X-204ENST00000486733 CECR2Q9BXF3 1484 aa14.49□□□□□ -0.09
RPS4X-204ENST00000486733 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
RPS4X-204ENST00000486733 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
RPS4X-204ENST00000486733 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
RPS4X-204ENST00000486733 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
RPS4X-204ENST00000486733 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
RPS4X-204ENST00000486733 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
RPS4X-204ENST00000486733 WIZO95785 1651 aa14.29□□□□□ -0.12
RPS4X-204ENST00000486733 EIF4G1Q04637 1599 aaKnown RBP14.28□□□□□ -0.12
RPS4X-204ENST00000486733 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
RPS4X-204ENST00000486733 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
RPS4X-204ENST00000486733 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
RPS4X-204ENST00000486733 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
RPS4X-204ENST00000486733 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
RPS4X-204ENST00000486733 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
RPS4X-204ENST00000486733 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
RPS4X-204ENST00000486733 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
RPS4X-204ENST00000486733 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
RPS4X-204ENST00000486733 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
RPS4X-204ENST00000486733 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
RPS4X-204ENST00000486733 CFTRP13569 1480 aa13.76□□□□□ -0.21
RPS4X-204ENST00000486733 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
RPS4X-204ENST00000486733 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
RPS4X-204ENST00000486733 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
RPS4X-204ENST00000486733 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
RPS4X-204ENST00000486733 WRNQ14191 1432 aaPredicted RBP eCLIP13.58□□□□□ -0.23
RPS4X-204ENST00000486733 NESP48681 1621 aa13.57□□□□□ -0.24
RPS4X-204ENST00000486733 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
RPS4X-204ENST00000486733 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
RPS4X-204ENST00000486733 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
RPS4X-204ENST00000486733 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
RPS4X-204ENST00000486733 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
RPS4X-204ENST00000486733 CUX1P39880 1505 aa13.5□□□□□ -0.25
RPS4X-204ENST00000486733 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
RPS4X-204ENST00000486733 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
RPS4X-204ENST00000486733 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
RPS4X-204ENST00000486733 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
RPS4X-204ENST00000486733 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
RPS4X-204ENST00000486733 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
RPS4X-204ENST00000486733 EEA1Q15075 1411 aa13.38□□□□□ -0.27
RPS4X-204ENST00000486733 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
RPS4X-204ENST00000486733 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
RPS4X-204ENST00000486733 WDR62O43379 1518 aa13.34□□□□□ -0.27
RPS4X-204ENST00000486733 SOGA1O94964 1423 aa13.33□□□□□ -0.28
RPS4X-204ENST00000486733 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
RPS4X-204ENST00000486733 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
RPS4X-204ENST00000486733 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
RPS4X-204ENST00000486733 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
RPS4X-204ENST00000486733 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
RPS4X-204ENST00000486733 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
RPS4X-204ENST00000486733 TARBP1Q13395 1621 aaKnown RBP13.25□□□□□ -0.29
RPS4X-204ENST00000486733 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
RPS4X-204ENST00000486733 KIF21BO75037 1637 aa13.23□□□□□ -0.29
RPS4X-204ENST00000486733 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
RPS4X-204ENST00000486733 CUX2O14529 1486 aa13.21□□□□□ -0.29
RPS4X-204ENST00000486733 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.3
RPS4X-204ENST00000486733 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
RPS4X-204ENST00000486733 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
RPS4X-204ENST00000486733 IFT140Q96RY7 1462 aa13.18□□□□□ -0.3
RPS4X-204ENST00000486733 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
RPS4X-204ENST00000486733 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
RPS4X-204ENST00000486733 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
RPS4X-204ENST00000486733 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
RPS4X-204ENST00000486733 IGF1RP08069 1367 aa13.13□□□□□ -0.31
RPS4X-204ENST00000486733 CUL7Q14999 1698 aa13.12□□□□□ -0.31
RPS4X-204ENST00000486733 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
RPS4X-204ENST00000486733 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
RPS4X-204ENST00000486733 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
RPS4X-204ENST00000486733 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
RPS4X-204ENST00000486733 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
RPS4X-204ENST00000486733 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
RPS4X-204ENST00000486733 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
RPS4X-204ENST00000486733 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
RPS4X-204ENST00000486733 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
RPS4X-204ENST00000486733 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
RPS4X-204ENST00000486733 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.328e-8■■■■□ 23.7
RPS4X-204ENST00000486733 FOXD1Q16676 465 aa13.02□□□□□ -0.32
RPS4X-204ENST00000486733 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
RPS4X-204ENST00000486733 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
RPS4X-204ENST00000486733 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
RPS4X-204ENST00000486733 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
RPS4X-204ENST00000486733 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
RPS4X-204ENST00000486733 SNAPC4Q5SXM2 1469 aa12.94□□□□□ -0.34
RPS4X-204ENST00000486733 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms