RNA–Protein interactions for RNA: ENST00000298510.3

PRDX3-201, Transcript of peroxiredoxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDX3, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX3-201ENST00000298510 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
PRDX3-201ENST00000298510 CCDC180Q9P1Z9 1646 aa39.72■■■■□ 3.95
PRDX3-201ENST00000298510 ABCC9O60706 1549 aa38.87■■■■□ 3.81
PRDX3-201ENST00000298510 DCAF8L2P0C7V8 631 aa37.49■■■■□ 3.59
PRDX3-201ENST00000298510 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
PRDX3-201ENST00000298510 NACADO15069 1562 aa37.33■■■■□ 3.57
PRDX3-201ENST00000298510 ZCCHC6Q5VYS8 1495 aaKnown RBP37.31■■■■□ 3.56
PRDX3-201ENST00000298510 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
PRDX3-201ENST00000298510 DCAF1Q9Y4B6 1507 aa37■■■■□ 3.51
PRDX3-201ENST00000298510 UNC13AQ9UPW8 1703 aa36.56■■■■□ 3.44
PRDX3-201ENST00000298510 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.41
PRDX3-201ENST00000298510 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
PRDX3-201ENST00000298510 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
PRDX3-201ENST00000298510 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
PRDX3-201ENST00000298510 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
PRDX3-201ENST00000298510 EIF4G1Q04637 1599 aaKnown RBP35.29■■■■□ 3.24
PRDX3-201ENST00000298510 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
PRDX3-201ENST00000298510 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
PRDX3-201ENST00000298510 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
PRDX3-201ENST00000298510 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
PRDX3-201ENST00000298510 MROH2BQ7Z745 1585 aa34.54■■■■□ 3.12
PRDX3-201ENST00000298510 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
PRDX3-201ENST00000298510 NCAPD3P42695 1498 aa34.46■■■■□ 3.11
PRDX3-201ENST00000298510 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
PRDX3-201ENST00000298510 PEG3Q9GZU2 1588 aa34.35■■■■□ 3.09
PRDX3-201ENST00000298510 HMGXB3Q12766 1538 aa34.28■■■■□ 3.08
PRDX3-201ENST00000298510 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
PRDX3-201ENST00000298510 WIZO95785 1651 aa34.19■■■■□ 3.06
PRDX3-201ENST00000298510 RSF1Q96T23 1441 aaPredicted RBP34.18■■■■□ 3.06
PRDX3-201ENST00000298510 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
PRDX3-201ENST00000298510 NESP48681 1621 aa33.68■■■□□ 2.98
PRDX3-201ENST00000298510 LAMC3Q9Y6N6 1575 aa33.53■■■□□ 2.96
PRDX3-201ENST00000298510 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
PRDX3-201ENST00000298510 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
PRDX3-201ENST00000298510 ERCC6Q03468 1493 aa33.47■■■□□ 2.95
PRDX3-201ENST00000298510 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
PRDX3-201ENST00000298510 PDS5BQ9NTI5 1447 aa33.32■■■□□ 2.92
PRDX3-201ENST00000298510 CFTRP13569 1480 aa33.29■■■□□ 2.92
PRDX3-201ENST00000298510 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.91
PRDX3-201ENST00000298510 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
PRDX3-201ENST00000298510 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
PRDX3-201ENST00000298510 CEP164Q9UPV0 1460 aa33.04■■■□□ 2.88
PRDX3-201ENST00000298510 PRDM2Q13029 1718 aa33.03■■■□□ 2.88
PRDX3-201ENST00000298510 CUX2O14529 1486 aa33.02■■■□□ 2.88
PRDX3-201ENST00000298510 MRC2Q9UBG0 1479 aa32.97■■■□□ 2.87
PRDX3-201ENST00000298510 WDR62O43379 1518 aa32.85■■■□□ 2.85
PRDX3-201ENST00000298510 URB2Q14146 1524 aaKnown RBP32.78■■■□□ 2.84
PRDX3-201ENST00000298510 TOPBP1Q92547 1522 aa32.59■■■□□ 2.81
PRDX3-201ENST00000298510 ABCC8Q09428 1581 aa32.54■■■□□ 2.8
PRDX3-201ENST00000298510 DNMBPQ6XZF7 1577 aa32.54■■■□□ 2.8
PRDX3-201ENST00000298510 CUX1P39880 1505 aa32.39■■■□□ 2.78
PRDX3-201ENST00000298510 IFT140Q96RY7 1462 aa32.34■■■□□ 2.77
PRDX3-201ENST00000298510 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
PRDX3-201ENST00000298510 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
PRDX3-201ENST00000298510 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
PRDX3-201ENST00000298510 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
PRDX3-201ENST00000298510 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
PRDX3-201ENST00000298510 RAD54L2Q9Y4B4 1467 aa32.22■■■□□ 2.75
PRDX3-201ENST00000298510 SOGA1O94964 1423 aa32.21■■■□□ 2.75
PRDX3-201ENST00000298510 SYNJ1O43426 1573 aa32.14■■■□□ 2.74
PRDX3-201ENST00000298510 TOP2BQ02880 1626 aa32.12■■■□□ 2.73
PRDX3-201ENST00000298510 BIVM-ERCC5R4GMW8 1640 aa32.1■■■□□ 2.73
PRDX3-201ENST00000298510 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
PRDX3-201ENST00000298510 AQRO60306 1485 aaKnown RBP eCLIP32.07■■■□□ 2.724e-6■□□□□ 11
PRDX3-201ENST00000298510 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
PRDX3-201ENST00000298510 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
PRDX3-201ENST00000298510 WDR97A6NE52 1622 aa31.96■■■□□ 2.71
PRDX3-201ENST00000298510 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
PRDX3-201ENST00000298510 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.68
PRDX3-201ENST00000298510 ABCA5Q8WWZ7 1642 aa31.8■■■□□ 2.68
PRDX3-201ENST00000298510 GRIN2BQ13224 1484 aa31.79■■■□□ 2.68
PRDX3-201ENST00000298510 SNAPC4Q5SXM2 1469 aa31.76■■■□□ 2.67
PRDX3-201ENST00000298510 PBRM1Q86U86 1689 aa31.75■■■□□ 2.67
PRDX3-201ENST00000298510 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
PRDX3-201ENST00000298510 FBLN2P98095 1184 aa31.7■■■□□ 2.67
PRDX3-201ENST00000298510 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
PRDX3-201ENST00000298510 CHD1O14646 1710 aa31.68■■■□□ 2.66
PRDX3-201ENST00000298510 CHMP7Q8WUX9 453 aaPredicted RBP31.6■■■□□ 2.65
PRDX3-201ENST00000298510 SYNJ2O15056 1496 aa31.57■■■□□ 2.64
PRDX3-201ENST00000298510 TRIM41Q8WV44 630 aa31.57■■■□□ 2.64
PRDX3-201ENST00000298510 ERICH3Q5RHP9 1530 aa31.55■■■□□ 2.64
PRDX3-201ENST00000298510 KIF27Q86VH2 1401 aa31.52■■■□□ 2.64
PRDX3-201ENST00000298510 ADAMTS12P58397 1594 aa31.49■■■□□ 2.63
PRDX3-201ENST00000298510 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
PRDX3-201ENST00000298510 IGF1RP08069 1367 aa31.41■■■□□ 2.62
PRDX3-201ENST00000298510 GRIN2AQ12879 1464 aa31.38■■■□□ 2.61
PRDX3-201ENST00000298510 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
PRDX3-201ENST00000298510 CLASP1Q7Z460 1538 aa31.3■■■□□ 2.6
PRDX3-201ENST00000298510 CUL7Q14999 1698 aa31.27■■■□□ 2.6
PRDX3-201ENST00000298510 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.6
PRDX3-201ENST00000298510 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
PRDX3-201ENST00000298510 NUP160Q12769 1436 aa31.23■■■□□ 2.59
PRDX3-201ENST00000298510 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
PRDX3-201ENST00000298510 RIMBP3CA6NJZ7 1639 aa31.21■■■□□ 2.59
PRDX3-201ENST00000298510 RIMBP3BA6NNM3 1639 aa31.21■■■□□ 2.59
PRDX3-201ENST00000298510 RIMBP3Q9UFD9 1639 aa31.21■■■□□ 2.59
PRDX3-201ENST00000298510 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
PRDX3-201ENST00000298510 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
PRDX3-201ENST00000298510 SHROOM2Q13796 1616 aa30.98■■■□□ 2.55
PRDX3-201ENST00000298510 CSRNP3Q8WYN3 585 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 359.7 ms