Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
PCP4P48539 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
PCP4P48539 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PCP4P48539 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.78□□□□□ -0.52
PCP4P48539 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.77□□□□□ -0.52
PCP4P48539 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC11.77□□□□□ -0.52
PCP4P48539 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
PCP4P48539 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.77□□□□□ -0.52
PCP4P48539 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.77□□□□□ -0.52
PCP4P48539 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC11.77□□□□□ -0.52
PCP4P48539 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.77□□□□□ -0.52
PCP4P48539 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PCP4P48539 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 MIR193BHG-211ENST00000641433 5365 ntBASIC11.77□□□□□ -0.53
PCP4P48539 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC11.77□□□□□ -0.53
PCP4P48539 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PCP4P48539 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PCP4P48539 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC11.76□□□□□ -0.53
PCP4P48539 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.76□□□□□ -0.53
PCP4P48539 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC11.76□□□□□ -0.53
PCP4P48539 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
PCP4P48539 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.76□□□□□ -0.53
PCP4P48539 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PCP4P48539 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.76□□□□□ -0.53
PCP4P48539 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.76□□□□□ -0.53
PCP4P48539 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.76□□□□□ -0.53
PCP4P48539 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms