RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
RELA-202ENST00000406246 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
RELA-202ENST00000406246 ZCCHC6Q5VYS8 1495 aaKnown RBP35.64■■■■□ 3.3
RELA-202ENST00000406246 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
RELA-202ENST00000406246 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
RELA-202ENST00000406246 ABCC9O60706 1549 aa35.09■■■■□ 3.21
RELA-202ENST00000406246 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
RELA-202ENST00000406246 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
RELA-202ENST00000406246 MYO15BQ96JP2 1530 aa34.22■■■■□ 3.07
RELA-202ENST00000406246 NACADO15069 1562 aa34.17■■■■□ 3.06
RELA-202ENST00000406246 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
RELA-202ENST00000406246 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
RELA-202ENST00000406246 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
RELA-202ENST00000406246 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.924e-10■□□□□ 10.7
RELA-202ENST00000406246 CECR2Q9BXF3 1484 aa33.22■■■□□ 2.91
RELA-202ENST00000406246 RSF1Q96T23 1441 aaPredicted RBP33.09■■■□□ 2.89
RELA-202ENST00000406246 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
RELA-202ENST00000406246 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
RELA-202ENST00000406246 WIZO95785 1651 aa32.75■■■□□ 2.83
RELA-202ENST00000406246 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
RELA-202ENST00000406246 SMARCA4P51532 1647 aa32.6■■■□□ 2.81
RELA-202ENST00000406246 CHIC1Q5VXU3 224 aa32.45■■■□□ 2.78
RELA-202ENST00000406246 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
RELA-202ENST00000406246 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
RELA-202ENST00000406246 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
RELA-202ENST00000406246 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
RELA-202ENST00000406246 PEG3Q9GZU2 1588 aa31.99■■■□□ 2.71
RELA-202ENST00000406246 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
RELA-202ENST00000406246 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
RELA-202ENST00000406246 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
RELA-202ENST00000406246 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
RELA-202ENST00000406246 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
RELA-202ENST00000406246 ABCC8Q09428 1581 aa31.57■■■□□ 2.64
RELA-202ENST00000406246 FAM9AQ8IZU1 332 aaPredicted RBP31.53■■■□□ 2.64
RELA-202ENST00000406246 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
RELA-202ENST00000406246 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
RELA-202ENST00000406246 EHMT2Q96KQ7 1210 aa31.34■■■□□ 2.61
RELA-202ENST00000406246 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.58
RELA-202ENST00000406246 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
RELA-202ENST00000406246 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
RELA-202ENST00000406246 CFTRP13569 1480 aa31.02■■■□□ 2.56
RELA-202ENST00000406246 SOGA1O94964 1423 aa30.99■■■□□ 2.55
RELA-202ENST00000406246 RUSC2Q8N2Y8 1516 aa30.94■■■□□ 2.54
RELA-202ENST00000406246 CADPSQ9ULU8 1353 aa30.93■■■□□ 2.54
RELA-202ENST00000406246 NESP48681 1621 aa30.89■■■□□ 2.53
RELA-202ENST00000406246 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
RELA-202ENST00000406246 CUX1P39880 1505 aa30.76■■■□□ 2.52
RELA-202ENST00000406246 TOP2BQ02880 1626 aa30.75■■■□□ 2.51
RELA-202ENST00000406246 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
RELA-202ENST00000406246 CSRNP3Q8WYN3 585 aa30.65■■■□□ 2.5
RELA-202ENST00000406246 FANCD2Q9BXW9 1451 aa30.65■■■□□ 2.5
RELA-202ENST00000406246 EEA1Q15075 1411 aa30.5■■■□□ 2.47
RELA-202ENST00000406246 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
RELA-202ENST00000406246 UBTFP17480 764 aaKnown RBP30.46■■■□□ 2.47
RELA-202ENST00000406246 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
RELA-202ENST00000406246 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
RELA-202ENST00000406246 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
RELA-202ENST00000406246 TOPBP1Q92547 1522 aa30.31■■■□□ 2.44
RELA-202ENST00000406246 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
RELA-202ENST00000406246 GOLGA3Q08378 1498 aa30.29■■■□□ 2.44
RELA-202ENST00000406246 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
RELA-202ENST00000406246 RAPGEF2Q9Y4G8 1499 aa30.29■■■□□ 2.44
RELA-202ENST00000406246 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
RELA-202ENST00000406246 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
RELA-202ENST00000406246 RANGAP1P46060 587 aaPredicted RBP30.28■■■□□ 2.44
RELA-202ENST00000406246 CUX2O14529 1486 aa30.28■■■□□ 2.44
RELA-202ENST00000406246 KIF27Q86VH2 1401 aa30.26■■■□□ 2.43
RELA-202ENST00000406246 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
RELA-202ENST00000406246 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
RELA-202ENST00000406246 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
RELA-202ENST00000406246 PPARGC1BQ86YN6 1023 aaKnown RBP30.21■■■□□ 2.43
RELA-202ENST00000406246 KIF21BO75037 1637 aa30.21■■■□□ 2.43
RELA-202ENST00000406246 PCGF6Q9BYE7 350 aa30.18■■■□□ 2.42
RELA-202ENST00000406246 PRXQ9BXM0 1461 aa30.08■■■□□ 2.41
RELA-202ENST00000406246 IGF1RP08069 1367 aa30.06■■■□□ 2.4
RELA-202ENST00000406246 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
RELA-202ENST00000406246 ABCA10Q8WWZ4 1543 aa29.98■■■□□ 2.39
RELA-202ENST00000406246 TTBK1Q5TCY1 1321 aaPredicted RBP29.98■■■□□ 2.39
RELA-202ENST00000406246 ERCC6Q03468 1493 aa29.95■■■□□ 2.38
RELA-202ENST00000406246 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
RELA-202ENST00000406246 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
RELA-202ENST00000406246 CLIP1P30622 1438 aa29.92■■■□□ 2.38
RELA-202ENST00000406246 CARMIL1Q5VZK9 1371 aa29.91■■■□□ 2.38
RELA-202ENST00000406246 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
RELA-202ENST00000406246 TRIM26Q12899 539 aaPredicted RBP29.83■■■□□ 2.37
RELA-202ENST00000406246 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
RELA-202ENST00000406246 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
RELA-202ENST00000406246 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.355e-7■■■■■ 31.2
RELA-202ENST00000406246 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
RELA-202ENST00000406246 WDR62O43379 1518 aa29.73■■■□□ 2.35
RELA-202ENST00000406246 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
RELA-202ENST00000406246 THOC2Q8NI27 1593 aaKnown RBP29.67■■■□□ 2.34
RELA-202ENST00000406246 CUL7Q14999 1698 aa29.61■■■□□ 2.33
RELA-202ENST00000406246 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
RELA-202ENST00000406246 VPS8Q8N3P4 1428 aa29.6■■■□□ 2.33
RELA-202ENST00000406246 P3H3Q8IVL6 736 aa29.59■■■□□ 2.33
RELA-202ENST00000406246 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
RELA-202ENST00000406246 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
RELA-202ENST00000406246 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
RELA-202ENST00000406246 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms