RNA–Protein interactions for RNA: ENST00000283233.9

CCDC148-201, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 3,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-201ENST00000283233 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
CCDC148-201ENST00000283233 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
CCDC148-201ENST00000283233 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
CCDC148-201ENST00000283233 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
CCDC148-201ENST00000283233 ABCC9O60706 1549 aa21.02■□□□□ 0.95
CCDC148-201ENST00000283233 HRCP23327 699 aa20.67■□□□□ 0.9
CCDC148-201ENST00000283233 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
CCDC148-201ENST00000283233 MYT1Q01538 1121 aa20.45■□□□□ 0.86
CCDC148-201ENST00000283233 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
CCDC148-201ENST00000283233 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
CCDC148-201ENST00000283233 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
CCDC148-201ENST00000283233 PCGF6Q9BYE7 350 aa20.02■□□□□ 0.8
CCDC148-201ENST00000283233 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC148-201ENST00000283233 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
CCDC148-201ENST00000283233 NACADO15069 1562 aa19.93■□□□□ 0.78
CCDC148-201ENST00000283233 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
CCDC148-201ENST00000283233 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
CCDC148-201ENST00000283233 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
CCDC148-201ENST00000283233 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
CCDC148-201ENST00000283233 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
CCDC148-201ENST00000283233 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
CCDC148-201ENST00000283233 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
CCDC148-201ENST00000283233 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
CCDC148-201ENST00000283233 GTF3C3Q9Y5Q9 886 aa19.35■□□□□ 0.69
CCDC148-201ENST00000283233 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
CCDC148-201ENST00000283233 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
CCDC148-201ENST00000283233 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
CCDC148-201ENST00000283233 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
CCDC148-201ENST00000283233 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
CCDC148-201ENST00000283233 CENPBP07199 599 aaPredicted RBP19.08■□□□□ 0.65
CCDC148-201ENST00000283233 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
CCDC148-201ENST00000283233 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
CCDC148-201ENST00000283233 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
CCDC148-201ENST00000283233 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
CCDC148-201ENST00000283233 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
CCDC148-201ENST00000283233 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
CCDC148-201ENST00000283233 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
CCDC148-201ENST00000283233 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
CCDC148-201ENST00000283233 WIZO95785 1651 aa18.78■□□□□ 0.6
CCDC148-201ENST00000283233 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
CCDC148-201ENST00000283233 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
CCDC148-201ENST00000283233 ANP32EQ9BTT0 268 aa18.72■□□□□ 0.59
CCDC148-201ENST00000283233 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
CCDC148-201ENST00000283233 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
CCDC148-201ENST00000283233 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
CCDC148-201ENST00000283233 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
CCDC148-201ENST00000283233 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
CCDC148-201ENST00000283233 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
CCDC148-201ENST00000283233 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
CCDC148-201ENST00000283233 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
CCDC148-201ENST00000283233 APLP2Q06481 763 aa18.53■□□□□ 0.56
CCDC148-201ENST00000283233 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
CCDC148-201ENST00000283233 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
CCDC148-201ENST00000283233 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
CCDC148-201ENST00000283233 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
CCDC148-201ENST00000283233 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
CCDC148-201ENST00000283233 NESP48681 1621 aa18.28■□□□□ 0.52
CCDC148-201ENST00000283233 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
CCDC148-201ENST00000283233 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
CCDC148-201ENST00000283233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
CCDC148-201ENST00000283233 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
CCDC148-201ENST00000283233 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.5
CCDC148-201ENST00000283233 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
CCDC148-201ENST00000283233 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
CCDC148-201ENST00000283233 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
CCDC148-201ENST00000283233 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
CCDC148-201ENST00000283233 MIER1Q8N108 512 aa18.03■□□□□ 0.48
CCDC148-201ENST00000283233 CFTRP13569 1480 aa18■□□□□ 0.47
CCDC148-201ENST00000283233 ABCC8Q09428 1581 aa18■□□□□ 0.47
CCDC148-201ENST00000283233 CCDC136Q96JN2 1154 aa18■□□□□ 0.47
CCDC148-201ENST00000283233 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
CCDC148-201ENST00000283233 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
CCDC148-201ENST00000283233 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
CCDC148-201ENST00000283233 BCANQ96GW7 911 aa17.87■□□□□ 0.45
CCDC148-201ENST00000283233 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
CCDC148-201ENST00000283233 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
CCDC148-201ENST00000283233 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
CCDC148-201ENST00000283233 WRNQ14191 1432 aaPredicted RBP eCLIP17.84■□□□□ 0.45
CCDC148-201ENST00000283233 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
CCDC148-201ENST00000283233 RBM19Q9Y4C8 960 aaKnown RBP17.76■□□□□ 0.43
CCDC148-201ENST00000283233 MSH5O43196 834 aa17.75■□□□□ 0.43
CCDC148-201ENST00000283233 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.73■□□□□ 0.43
CCDC148-201ENST00000283233 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
CCDC148-201ENST00000283233 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
CCDC148-201ENST00000283233 CUX1P39880 1505 aa17.71■□□□□ 0.43
CCDC148-201ENST00000283233 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
CCDC148-201ENST00000283233 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
CCDC148-201ENST00000283233 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
CCDC148-201ENST00000283233 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
CCDC148-201ENST00000283233 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
CCDC148-201ENST00000283233 EIF5BO60841 1220 aaKnown RBP17.65■□□□□ 0.42
CCDC148-201ENST00000283233 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
CCDC148-201ENST00000283233 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.42
CCDC148-201ENST00000283233 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CCDC148-201ENST00000283233 SOGA1O94964 1423 aa17.62■□□□□ 0.41
CCDC148-201ENST00000283233 FBLN2P98095 1184 aa17.61■□□□□ 0.41
CCDC148-201ENST00000283233 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
CCDC148-201ENST00000283233 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
CCDC148-201ENST00000283233 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
CCDC148-201ENST00000283233 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms