RNA–Protein interactions for RNA: ENST00000338525.6

TREX2-203, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TREX2, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-203ENST00000338525 NISCHQ9Y2I1 1504 aa44.28■■■■■ 4.68
TREX2-203ENST00000338525 CCDC180Q9P1Z9 1646 aa38.68■■■■□ 3.78
TREX2-203ENST00000338525 ZCCHC6Q5VYS8 1495 aaKnown RBP37.1■■■■□ 3.53
TREX2-203ENST00000338525 ABCC9O60706 1549 aa37.05■■■■□ 3.52
TREX2-203ENST00000338525 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
TREX2-203ENST00000338525 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
TREX2-203ENST00000338525 MYO15BQ96JP2 1530 aa36.25■■■■□ 3.39
TREX2-203ENST00000338525 NACADO15069 1562 aa36.18■■■■□ 3.38
TREX2-203ENST00000338525 SHROOM4Q9ULL8 1493 aa36.01■■■■□ 3.36
TREX2-203ENST00000338525 RB1CC1Q8TDY2 1594 aa35.96■■■■□ 3.35
TREX2-203ENST00000338525 SCRIBQ14160 1630 aa35.62■■■■□ 3.29
TREX2-203ENST00000338525 UNC13AQ9UPW8 1703 aa35.14■■■■□ 3.22
TREX2-203ENST00000338525 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
TREX2-203ENST00000338525 BICRAQ9NZM4 1560 aa34.86■■■■□ 3.17
TREX2-203ENST00000338525 SUPT5HO00267 1087 aaKnown RBP34.51■■■■□ 3.12
TREX2-203ENST00000338525 CECR2Q9BXF3 1484 aa34.48■■■■□ 3.11
TREX2-203ENST00000338525 RSF1Q96T23 1441 aaPredicted RBP34.26■■■■□ 3.07
TREX2-203ENST00000338525 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
TREX2-203ENST00000338525 BAZ1AQ9NRL2 1556 aaPredicted RBP34.21■■■■□ 3.07
TREX2-203ENST00000338525 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
TREX2-203ENST00000338525 WIZO95785 1651 aa33.9■■■■□ 3.02
TREX2-203ENST00000338525 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
TREX2-203ENST00000338525 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
TREX2-203ENST00000338525 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
TREX2-203ENST00000338525 SMARCA2P51531 1590 aa33.61■■■□□ 2.97
TREX2-203ENST00000338525 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
TREX2-203ENST00000338525 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
TREX2-203ENST00000338525 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
TREX2-203ENST00000338525 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
TREX2-203ENST00000338525 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
TREX2-203ENST00000338525 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
TREX2-203ENST00000338525 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
TREX2-203ENST00000338525 CHIC1Q5VXU3 224 aa32.8■■■□□ 2.84
TREX2-203ENST00000338525 CFTRP13569 1480 aa32.59■■■□□ 2.81
TREX2-203ENST00000338525 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
TREX2-203ENST00000338525 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
TREX2-203ENST00000338525 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
TREX2-203ENST00000338525 NESP48681 1621 aa32.4■■■□□ 2.78
TREX2-203ENST00000338525 LAMC3Q9Y6N6 1575 aa32.31■■■□□ 2.76
TREX2-203ENST00000338525 PRDM2Q13029 1718 aa32.26■■■□□ 2.76
TREX2-203ENST00000338525 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.75
TREX2-203ENST00000338525 FANCD2Q9BXW9 1451 aa32.2■■■□□ 2.75
TREX2-203ENST00000338525 PDS5BQ9NTI5 1447 aa32.14■■■□□ 2.74
TREX2-203ENST00000338525 SYNJ1O43426 1573 aa32.09■■■□□ 2.73
TREX2-203ENST00000338525 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
TREX2-203ENST00000338525 CUX1P39880 1505 aa32■■■□□ 2.71
TREX2-203ENST00000338525 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
TREX2-203ENST00000338525 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
TREX2-203ENST00000338525 BIVM-ERCC5R4GMW8 1640 aa31.91■■■□□ 2.7
TREX2-203ENST00000338525 FAM9AQ8IZU1 332 aaPredicted RBP31.89■■■□□ 2.7
TREX2-203ENST00000338525 ERCC6Q03468 1493 aa31.81■■■□□ 2.68
TREX2-203ENST00000338525 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
TREX2-203ENST00000338525 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
TREX2-203ENST00000338525 TOPBP1Q92547 1522 aa31.8■■■□□ 2.68
TREX2-203ENST00000338525 SOGA1O94964 1423 aa31.77■■■□□ 2.68
TREX2-203ENST00000338525 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
TREX2-203ENST00000338525 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
TREX2-203ENST00000338525 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
TREX2-203ENST00000338525 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
TREX2-203ENST00000338525 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
TREX2-203ENST00000338525 EEA1Q15075 1411 aa31.58■■■□□ 2.65
TREX2-203ENST00000338525 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
TREX2-203ENST00000338525 CSRNP3Q8WYN3 585 aa31.54■■■□□ 2.64
TREX2-203ENST00000338525 WDR62O43379 1518 aa31.53■■■□□ 2.64
TREX2-203ENST00000338525 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
TREX2-203ENST00000338525 CUX2O14529 1486 aa31.49■■■□□ 2.63
TREX2-203ENST00000338525 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
TREX2-203ENST00000338525 THOC2Q8NI27 1593 aaKnown RBP31.48■■■□□ 2.63
TREX2-203ENST00000338525 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
TREX2-203ENST00000338525 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
TREX2-203ENST00000338525 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
TREX2-203ENST00000338525 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
TREX2-203ENST00000338525 IGF1RP08069 1367 aa31.26■■■□□ 2.6
TREX2-203ENST00000338525 WDR97A6NE52 1622 aa31.26■■■□□ 2.59
TREX2-203ENST00000338525 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
TREX2-203ENST00000338525 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.581e-6■■■■□ 21.8
TREX2-203ENST00000338525 UBTFP17480 764 aaKnown RBP31.15■■■□□ 2.58
TREX2-203ENST00000338525 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
TREX2-203ENST00000338525 ZNF608Q9ULD9 1512 aaPredicted RBP31.15■■■□□ 2.58
TREX2-203ENST00000338525 KIF21BO75037 1637 aa31.15■■■□□ 2.58
TREX2-203ENST00000338525 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
TREX2-203ENST00000338525 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
TREX2-203ENST00000338525 RAPGEF2Q9Y4G8 1499 aa31.12■■■□□ 2.57
TREX2-203ENST00000338525 CARMIL1Q5VZK9 1371 aa31.11■■■□□ 2.57
TREX2-203ENST00000338525 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
TREX2-203ENST00000338525 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
TREX2-203ENST00000338525 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
TREX2-203ENST00000338525 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
TREX2-203ENST00000338525 CUL7Q14999 1698 aa30.94■■■□□ 2.54
TREX2-203ENST00000338525 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
TREX2-203ENST00000338525 FHAD1B1AJZ9 1412 aa30.84■■■□□ 2.53
TREX2-203ENST00000338525 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
TREX2-203ENST00000338525 CEP162Q5TB80 1403 aa30.81■■■□□ 2.52
TREX2-203ENST00000338525 RANGAP1P46060 587 aaPredicted RBP30.8■■■□□ 2.52
TREX2-203ENST00000338525 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
TREX2-203ENST00000338525 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
TREX2-203ENST00000338525 FBLN2P98095 1184 aa30.69■■■□□ 2.5
TREX2-203ENST00000338525 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
TREX2-203ENST00000338525 CLIP1P30622 1438 aa30.67■■■□□ 2.5
TREX2-203ENST00000338525 SYNJ2O15056 1496 aa30.64■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms