RNA–Protein interactions for RNA: ENST00000627656.2

FOXM1-210, Transcript of forkhead box M1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-210ENST00000627656 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
FOXM1-210ENST00000627656 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.54
FOXM1-210ENST00000627656 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
FOXM1-210ENST00000627656 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
FOXM1-210ENST00000627656 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
FOXM1-210ENST00000627656 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
FOXM1-210ENST00000627656 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
FOXM1-210ENST00000627656 PCGF6Q9BYE7 350 aa22.84■■□□□ 1.25
FOXM1-210ENST00000627656 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
FOXM1-210ENST00000627656 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
FOXM1-210ENST00000627656 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
FOXM1-210ENST00000627656 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
FOXM1-210ENST00000627656 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
FOXM1-210ENST00000627656 HRCP23327 699 aa22.56■■□□□ 1.2
FOXM1-210ENST00000627656 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
FOXM1-210ENST00000627656 ABCC9O60706 1549 aa22.23■■□□□ 1.15
FOXM1-210ENST00000627656 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
FOXM1-210ENST00000627656 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
FOXM1-210ENST00000627656 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
FOXM1-210ENST00000627656 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.1
FOXM1-210ENST00000627656 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
FOXM1-210ENST00000627656 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
FOXM1-210ENST00000627656 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
FOXM1-210ENST00000627656 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
FOXM1-210ENST00000627656 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
FOXM1-210ENST00000627656 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
FOXM1-210ENST00000627656 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
FOXM1-210ENST00000627656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
FOXM1-210ENST00000627656 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
FOXM1-210ENST00000627656 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
FOXM1-210ENST00000627656 WIZO95785 1651 aa21.39■■□□□ 1.02
FOXM1-210ENST00000627656 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
FOXM1-210ENST00000627656 NACADO15069 1562 aa21.27■■□□□ 1
FOXM1-210ENST00000627656 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
FOXM1-210ENST00000627656 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
FOXM1-210ENST00000627656 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
FOXM1-210ENST00000627656 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
FOXM1-210ENST00000627656 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
FOXM1-210ENST00000627656 SOGA1O94964 1423 aa21.06■□□□□ 0.96
FOXM1-210ENST00000627656 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
FOXM1-210ENST00000627656 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
FOXM1-210ENST00000627656 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
FOXM1-210ENST00000627656 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
FOXM1-210ENST00000627656 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.95
FOXM1-210ENST00000627656 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
FOXM1-210ENST00000627656 APLP2Q06481 763 aa20.89■□□□□ 0.93
FOXM1-210ENST00000627656 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
FOXM1-210ENST00000627656 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
FOXM1-210ENST00000627656 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
FOXM1-210ENST00000627656 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
FOXM1-210ENST00000627656 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
FOXM1-210ENST00000627656 ITGAEP38570 1179 aa20.73■□□□□ 0.91
FOXM1-210ENST00000627656 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
FOXM1-210ENST00000627656 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
FOXM1-210ENST00000627656 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
FOXM1-210ENST00000627656 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
FOXM1-210ENST00000627656 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
FOXM1-210ENST00000627656 MYT1Q01538 1121 aa20.53■□□□□ 0.88
FOXM1-210ENST00000627656 CLIP1P30622 1438 aa20.53■□□□□ 0.88
FOXM1-210ENST00000627656 GOLGA3Q08378 1498 aa20.52■□□□□ 0.88
FOXM1-210ENST00000627656 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
FOXM1-210ENST00000627656 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
FOXM1-210ENST00000627656 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
FOXM1-210ENST00000627656 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
FOXM1-210ENST00000627656 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
FOXM1-210ENST00000627656 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
FOXM1-210ENST00000627656 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
FOXM1-210ENST00000627656 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
FOXM1-210ENST00000627656 MIER1Q8N108 512 aa20.38■□□□□ 0.85
FOXM1-210ENST00000627656 EEA1Q15075 1411 aa20.38■□□□□ 0.85
FOXM1-210ENST00000627656 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
FOXM1-210ENST00000627656 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
FOXM1-210ENST00000627656 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
FOXM1-210ENST00000627656 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
FOXM1-210ENST00000627656 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
FOXM1-210ENST00000627656 BCANQ96GW7 911 aa20.09■□□□□ 0.81
FOXM1-210ENST00000627656 KIF21BO75037 1637 aa20.07■□□□□ 0.8
FOXM1-210ENST00000627656 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
FOXM1-210ENST00000627656 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
FOXM1-210ENST00000627656 CUX2O14529 1486 aa19.99■□□□□ 0.79
FOXM1-210ENST00000627656 ARAP1Q96P48 1450 aa19.98■□□□□ 0.79
FOXM1-210ENST00000627656 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
FOXM1-210ENST00000627656 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
FOXM1-210ENST00000627656 CUX1P39880 1505 aa19.94■□□□□ 0.78
FOXM1-210ENST00000627656 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
FOXM1-210ENST00000627656 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
FOXM1-210ENST00000627656 KCNH8Q96L42 1107 aa19.9■□□□□ 0.78
FOXM1-210ENST00000627656 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
FOXM1-210ENST00000627656 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
FOXM1-210ENST00000627656 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
FOXM1-210ENST00000627656 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
FOXM1-210ENST00000627656 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
FOXM1-210ENST00000627656 IGF1RP08069 1367 aa19.82■□□□□ 0.76
FOXM1-210ENST00000627656 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
FOXM1-210ENST00000627656 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
FOXM1-210ENST00000627656 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
FOXM1-210ENST00000627656 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
FOXM1-210ENST00000627656 SUPT16HQ9Y5B9 1047 aaKnown RBP19.78■□□□□ 0.76
FOXM1-210ENST00000627656 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
FOXM1-210ENST00000627656 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms