RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
LINC00477-201ENST00000483544 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
LINC00477-201ENST00000483544 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
LINC00477-201ENST00000483544 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
LINC00477-201ENST00000483544 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
LINC00477-201ENST00000483544 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
LINC00477-201ENST00000483544 MYT1Q01538 1121 aa21.33■■□□□ 1.01
LINC00477-201ENST00000483544 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
LINC00477-201ENST00000483544 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
LINC00477-201ENST00000483544 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
LINC00477-201ENST00000483544 ABCC9O60706 1549 aa20.85■□□□□ 0.93
LINC00477-201ENST00000483544 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
LINC00477-201ENST00000483544 NACADO15069 1562 aa20.7■□□□□ 0.9
LINC00477-201ENST00000483544 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
LINC00477-201ENST00000483544 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
LINC00477-201ENST00000483544 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
LINC00477-201ENST00000483544 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
LINC00477-201ENST00000483544 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
LINC00477-201ENST00000483544 HRCP23327 699 aa20.13■□□□□ 0.81
LINC00477-201ENST00000483544 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
LINC00477-201ENST00000483544 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
LINC00477-201ENST00000483544 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
LINC00477-201ENST00000483544 WIZO95785 1651 aa19.98■□□□□ 0.79
LINC00477-201ENST00000483544 UNC13AQ9UPW8 1703 aa19.94■□□□□ 0.78
LINC00477-201ENST00000483544 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
LINC00477-201ENST00000483544 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
LINC00477-201ENST00000483544 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
LINC00477-201ENST00000483544 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
LINC00477-201ENST00000483544 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
LINC00477-201ENST00000483544 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
LINC00477-201ENST00000483544 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
LINC00477-201ENST00000483544 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
LINC00477-201ENST00000483544 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
LINC00477-201ENST00000483544 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
LINC00477-201ENST00000483544 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
LINC00477-201ENST00000483544 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
LINC00477-201ENST00000483544 EEA1Q15075 1411 aa19.48■□□□□ 0.71
LINC00477-201ENST00000483544 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
LINC00477-201ENST00000483544 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
LINC00477-201ENST00000483544 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
LINC00477-201ENST00000483544 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
LINC00477-201ENST00000483544 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
LINC00477-201ENST00000483544 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
LINC00477-201ENST00000483544 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
LINC00477-201ENST00000483544 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
LINC00477-201ENST00000483544 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
LINC00477-201ENST00000483544 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
LINC00477-201ENST00000483544 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
LINC00477-201ENST00000483544 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
LINC00477-201ENST00000483544 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
LINC00477-201ENST00000483544 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
LINC00477-201ENST00000483544 SOGA1O94964 1423 aa19.17■□□□□ 0.66
LINC00477-201ENST00000483544 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
LINC00477-201ENST00000483544 KIF21BO75037 1637 aa19.14■□□□□ 0.66
LINC00477-201ENST00000483544 APLP2Q06481 763 aa19.14■□□□□ 0.66
LINC00477-201ENST00000483544 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
LINC00477-201ENST00000483544 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
LINC00477-201ENST00000483544 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
LINC00477-201ENST00000483544 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
LINC00477-201ENST00000483544 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
LINC00477-201ENST00000483544 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
LINC00477-201ENST00000483544 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
LINC00477-201ENST00000483544 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
LINC00477-201ENST00000483544 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
LINC00477-201ENST00000483544 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
LINC00477-201ENST00000483544 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
LINC00477-201ENST00000483544 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
LINC00477-201ENST00000483544 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
LINC00477-201ENST00000483544 CLIP1P30622 1438 aa18.83■□□□□ 0.61
LINC00477-201ENST00000483544 CFTRP13569 1480 aa18.83■□□□□ 0.6
LINC00477-201ENST00000483544 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
LINC00477-201ENST00000483544 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
LINC00477-201ENST00000483544 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
LINC00477-201ENST00000483544 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
LINC00477-201ENST00000483544 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
LINC00477-201ENST00000483544 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
LINC00477-201ENST00000483544 CUX1P39880 1505 aa18.76■□□□□ 0.59
LINC00477-201ENST00000483544 KIF27Q86VH2 1401 aa18.71■□□□□ 0.59
LINC00477-201ENST00000483544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
LINC00477-201ENST00000483544 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
LINC00477-201ENST00000483544 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
LINC00477-201ENST00000483544 CUX2O14529 1486 aa18.56■□□□□ 0.56
LINC00477-201ENST00000483544 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
LINC00477-201ENST00000483544 GTF3C3Q9Y5Q9 886 aa18.51■□□□□ 0.55
LINC00477-201ENST00000483544 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
LINC00477-201ENST00000483544 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
LINC00477-201ENST00000483544 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
LINC00477-201ENST00000483544 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
LINC00477-201ENST00000483544 IGF1RP08069 1367 aa18.43■□□□□ 0.54
LINC00477-201ENST00000483544 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
LINC00477-201ENST00000483544 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
LINC00477-201ENST00000483544 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
LINC00477-201ENST00000483544 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
LINC00477-201ENST00000483544 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
LINC00477-201ENST00000483544 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
LINC00477-201ENST00000483544 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
LINC00477-201ENST00000483544 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
LINC00477-201ENST00000483544 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LINC00477-201ENST00000483544 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
LINC00477-201ENST00000483544 CUL7Q14999 1698 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms