RNA–Protein interactions for RNA: ENST00000230124.7

FIG4-201, Transcript of FIG4 phosphoinositide 5-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FIG4, Length 3,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIG4-201ENST00000230124 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
FIG4-201ENST00000230124 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
FIG4-201ENST00000230124 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
FIG4-201ENST00000230124 HRCP23327 699 aa23.78■■□□□ 1.4
FIG4-201ENST00000230124 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
FIG4-201ENST00000230124 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
FIG4-201ENST00000230124 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
FIG4-201ENST00000230124 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
FIG4-201ENST00000230124 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
FIG4-201ENST00000230124 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
FIG4-201ENST00000230124 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
FIG4-201ENST00000230124 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
FIG4-201ENST00000230124 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
FIG4-201ENST00000230124 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
FIG4-201ENST00000230124 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
FIG4-201ENST00000230124 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
FIG4-201ENST00000230124 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
FIG4-201ENST00000230124 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
FIG4-201ENST00000230124 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
FIG4-201ENST00000230124 ABCC9O60706 1549 aa22.22■■□□□ 1.15
FIG4-201ENST00000230124 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
FIG4-201ENST00000230124 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
FIG4-201ENST00000230124 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
FIG4-201ENST00000230124 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
FIG4-201ENST00000230124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
FIG4-201ENST00000230124 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
FIG4-201ENST00000230124 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
FIG4-201ENST00000230124 NEUROD1Q13562 356 aa21.95■■□□□ 1.1
FIG4-201ENST00000230124 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
FIG4-201ENST00000230124 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
FIG4-201ENST00000230124 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
FIG4-201ENST00000230124 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
FIG4-201ENST00000230124 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
FIG4-201ENST00000230124 WIZO95785 1651 aa21.62■■□□□ 1.05
FIG4-201ENST00000230124 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
FIG4-201ENST00000230124 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
FIG4-201ENST00000230124 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
FIG4-201ENST00000230124 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
FIG4-201ENST00000230124 CEP162Q5TB80 1403 aa21.39■■□□□ 1.02
FIG4-201ENST00000230124 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
FIG4-201ENST00000230124 ZNF316A6NFI3 1004 aaPredicted RBP21.36■■□□□ 1.01
FIG4-201ENST00000230124 SOGA1O94964 1423 aa21.35■■□□□ 1.01
FIG4-201ENST00000230124 HNRNPUL2Q1KMD3 747 aaKnown RBP21.31■■□□□ 1
FIG4-201ENST00000230124 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
FIG4-201ENST00000230124 MIER1Q8N108 512 aa21.3■■□□□ 1
FIG4-201ENST00000230124 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
FIG4-201ENST00000230124 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
FIG4-201ENST00000230124 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
FIG4-201ENST00000230124 NACADO15069 1562 aa21.23■□□□□ 0.99
FIG4-201ENST00000230124 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
FIG4-201ENST00000230124 TNIKQ9UKE5 1360 aa21.18■□□□□ 0.98
FIG4-201ENST00000230124 RANGAP1P46060 587 aaPredicted RBP21.16■□□□□ 0.98
FIG4-201ENST00000230124 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
FIG4-201ENST00000230124 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
FIG4-201ENST00000230124 MYT1Q01538 1121 aa21.03■□□□□ 0.96
FIG4-201ENST00000230124 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
FIG4-201ENST00000230124 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
FIG4-201ENST00000230124 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
FIG4-201ENST00000230124 EEA1Q15075 1411 aa20.9■□□□□ 0.94
FIG4-201ENST00000230124 APLP2Q06481 763 aa20.88■□□□□ 0.93
FIG4-201ENST00000230124 CLIP1P30622 1438 aa20.88■□□□□ 0.93
FIG4-201ENST00000230124 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
FIG4-201ENST00000230124 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
FIG4-201ENST00000230124 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
FIG4-201ENST00000230124 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
FIG4-201ENST00000230124 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
FIG4-201ENST00000230124 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
FIG4-201ENST00000230124 BICRAQ9NZM4 1560 aa20.67■□□□□ 0.9
FIG4-201ENST00000230124 DHX57Q6P158 1386 aaKnown RBP20.66■□□□□ 0.9
FIG4-201ENST00000230124 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
FIG4-201ENST00000230124 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
FIG4-201ENST00000230124 ITGAEP38570 1179 aa20.64■□□□□ 0.9
FIG4-201ENST00000230124 KIF21BO75037 1637 aa20.64■□□□□ 0.9
FIG4-201ENST00000230124 BCANQ96GW7 911 aa20.59■□□□□ 0.89
FIG4-201ENST00000230124 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
FIG4-201ENST00000230124 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
FIG4-201ENST00000230124 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
FIG4-201ENST00000230124 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
FIG4-201ENST00000230124 HIRIP3Q9BW71 556 aaPredicted RBP20.37■□□□□ 0.85
FIG4-201ENST00000230124 FKBP8Q14318 412 aa20.37■□□□□ 0.85
FIG4-201ENST00000230124 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
FIG4-201ENST00000230124 ANP32EQ9BTT0 268 aa20.36■□□□□ 0.85
FIG4-201ENST00000230124 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
FIG4-201ENST00000230124 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
FIG4-201ENST00000230124 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
FIG4-201ENST00000230124 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
FIG4-201ENST00000230124 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
FIG4-201ENST00000230124 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
FIG4-201ENST00000230124 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
FIG4-201ENST00000230124 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
FIG4-201ENST00000230124 TRIM52Q96A61 297 aa20.27■□□□□ 0.83
FIG4-201ENST00000230124 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
FIG4-201ENST00000230124 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
FIG4-201ENST00000230124 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
FIG4-201ENST00000230124 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
FIG4-201ENST00000230124 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
FIG4-201ENST00000230124 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
FIG4-201ENST00000230124 CUX2O14529 1486 aa20.16■□□□□ 0.82
FIG4-201ENST00000230124 P3H3Q8IVL6 736 aa20.13■□□□□ 0.81
FIG4-201ENST00000230124 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms