RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
TNIP3-201ENST00000057513 HRCP23327 699 aa23.17■■□□□ 1.3
TNIP3-201ENST00000057513 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
TNIP3-201ENST00000057513 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
TNIP3-201ENST00000057513 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
TNIP3-201ENST00000057513 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
TNIP3-201ENST00000057513 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
TNIP3-201ENST00000057513 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
TNIP3-201ENST00000057513 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
TNIP3-201ENST00000057513 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
TNIP3-201ENST00000057513 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
TNIP3-201ENST00000057513 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.12
TNIP3-201ENST00000057513 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
TNIP3-201ENST00000057513 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
TNIP3-201ENST00000057513 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
TNIP3-201ENST00000057513 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
TNIP3-201ENST00000057513 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
TNIP3-201ENST00000057513 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
TNIP3-201ENST00000057513 NEUROD1Q13562 356 aa21.3■■□□□ 1
TNIP3-201ENST00000057513 TRIM41Q8WV44 630 aa21.28■■□□□ 1
TNIP3-201ENST00000057513 MYT1Q01538 1121 aa21.26■□□□□ 0.99
TNIP3-201ENST00000057513 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
TNIP3-201ENST00000057513 ABCC9O60706 1549 aa21.21■□□□□ 0.99
TNIP3-201ENST00000057513 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
TNIP3-201ENST00000057513 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
TNIP3-201ENST00000057513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
TNIP3-201ENST00000057513 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
TNIP3-201ENST00000057513 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.96
TNIP3-201ENST00000057513 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
TNIP3-201ENST00000057513 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
TNIP3-201ENST00000057513 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
TNIP3-201ENST00000057513 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
TNIP3-201ENST00000057513 YTHDC1Q96MU7 727 aaKnown RBP20.67■□□□□ 0.9
TNIP3-201ENST00000057513 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
TNIP3-201ENST00000057513 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
TNIP3-201ENST00000057513 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
TNIP3-201ENST00000057513 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
TNIP3-201ENST00000057513 MIER1Q8N108 512 aa20.52■□□□□ 0.87
TNIP3-201ENST00000057513 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
TNIP3-201ENST00000057513 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
TNIP3-201ENST00000057513 WIZO95785 1651 aa20.44■□□□□ 0.86
TNIP3-201ENST00000057513 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
TNIP3-201ENST00000057513 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
TNIP3-201ENST00000057513 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
TNIP3-201ENST00000057513 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
TNIP3-201ENST00000057513 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
TNIP3-201ENST00000057513 SOGA1O94964 1423 aa20.23■□□□□ 0.83
TNIP3-201ENST00000057513 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
TNIP3-201ENST00000057513 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
TNIP3-201ENST00000057513 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
TNIP3-201ENST00000057513 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
TNIP3-201ENST00000057513 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
TNIP3-201ENST00000057513 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
TNIP3-201ENST00000057513 NACADO15069 1562 aa20.1■□□□□ 0.81
TNIP3-201ENST00000057513 EEA1Q15075 1411 aa20.1■□□□□ 0.81
TNIP3-201ENST00000057513 TSHZ2Q9NRE2 1034 aa20.07■□□□□ 0.8
TNIP3-201ENST00000057513 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
TNIP3-201ENST00000057513 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
TNIP3-201ENST00000057513 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
TNIP3-201ENST00000057513 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
TNIP3-201ENST00000057513 BCL11AQ9H165 835 aa19.93■□□□□ 0.78
TNIP3-201ENST00000057513 CLIP1P30622 1438 aa19.9■□□□□ 0.78
TNIP3-201ENST00000057513 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
TNIP3-201ENST00000057513 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
TNIP3-201ENST00000057513 APLP2Q06481 763 aa19.86■□□□□ 0.77
TNIP3-201ENST00000057513 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
TNIP3-201ENST00000057513 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
TNIP3-201ENST00000057513 KIF21BO75037 1637 aa19.82■□□□□ 0.76
TNIP3-201ENST00000057513 BCANQ96GW7 911 aa19.74■□□□□ 0.75
TNIP3-201ENST00000057513 KCNH8Q96L42 1107 aa19.74■□□□□ 0.75
TNIP3-201ENST00000057513 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
TNIP3-201ENST00000057513 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
TNIP3-201ENST00000057513 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
TNIP3-201ENST00000057513 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
TNIP3-201ENST00000057513 FKBP8Q14318 412 aa19.66■□□□□ 0.74
TNIP3-201ENST00000057513 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
TNIP3-201ENST00000057513 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
TNIP3-201ENST00000057513 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
TNIP3-201ENST00000057513 CUX2O14529 1486 aa19.52■□□□□ 0.71
TNIP3-201ENST00000057513 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
TNIP3-201ENST00000057513 NEFLP07196 543 aa19.49■□□□□ 0.71
TNIP3-201ENST00000057513 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
TNIP3-201ENST00000057513 ITGAEP38570 1179 aa19.46■□□□□ 0.71
TNIP3-201ENST00000057513 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
TNIP3-201ENST00000057513 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
TNIP3-201ENST00000057513 MSH5O43196 834 aa19.42■□□□□ 0.7
TNIP3-201ENST00000057513 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
TNIP3-201ENST00000057513 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
TNIP3-201ENST00000057513 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
TNIP3-201ENST00000057513 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
TNIP3-201ENST00000057513 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
TNIP3-201ENST00000057513 PPP1R15AO75807 674 aaPredicted RBP19.36■□□□□ 0.69
TNIP3-201ENST00000057513 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
TNIP3-201ENST00000057513 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
TNIP3-201ENST00000057513 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
TNIP3-201ENST00000057513 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
TNIP3-201ENST00000057513 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
TNIP3-201ENST00000057513 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
TNIP3-201ENST00000057513 ANP32CO43423 234 aa19.27■□□□□ 0.68
TNIP3-201ENST00000057513 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms