RNA–Protein interactions for RNA: ENST00000239446.5

PCDHB10-201, Transcript of protocadherin beta 10, humanhuman

APPRIS P1 BASIC

Gene PCDHB10, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB10-201ENST00000239446 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
PCDHB10-201ENST00000239446 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
PCDHB10-201ENST00000239446 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
PCDHB10-201ENST00000239446 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
PCDHB10-201ENST00000239446 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
PCDHB10-201ENST00000239446 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
PCDHB10-201ENST00000239446 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
PCDHB10-201ENST00000239446 ABCC9O60706 1549 aa22.68■■□□□ 1.22
PCDHB10-201ENST00000239446 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
PCDHB10-201ENST00000239446 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.2
PCDHB10-201ENST00000239446 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
PCDHB10-201ENST00000239446 HRCP23327 699 aa22.42■■□□□ 1.18
PCDHB10-201ENST00000239446 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.16
PCDHB10-201ENST00000239446 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
PCDHB10-201ENST00000239446 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
PCDHB10-201ENST00000239446 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
PCDHB10-201ENST00000239446 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
PCDHB10-201ENST00000239446 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
PCDHB10-201ENST00000239446 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCDHB10-201ENST00000239446 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
PCDHB10-201ENST00000239446 NACADO15069 1562 aa21.77■■□□□ 1.08
PCDHB10-201ENST00000239446 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
PCDHB10-201ENST00000239446 PELP1Q8IZL8 1130 aaKnown RBP21.64■■□□□ 1.05
PCDHB10-201ENST00000239446 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.05
PCDHB10-201ENST00000239446 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
PCDHB10-201ENST00000239446 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
PCDHB10-201ENST00000239446 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
PCDHB10-201ENST00000239446 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
PCDHB10-201ENST00000239446 WIZO95785 1651 aa21.29■■□□□ 1
PCDHB10-201ENST00000239446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
PCDHB10-201ENST00000239446 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
PCDHB10-201ENST00000239446 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
PCDHB10-201ENST00000239446 CCER1Q8TC90 406 aaPredicted RBP21.09■□□□□ 0.97
PCDHB10-201ENST00000239446 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
PCDHB10-201ENST00000239446 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
PCDHB10-201ENST00000239446 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
PCDHB10-201ENST00000239446 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PCDHB10-201ENST00000239446 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
PCDHB10-201ENST00000239446 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
PCDHB10-201ENST00000239446 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
PCDHB10-201ENST00000239446 NEUROD1Q13562 356 aa20.83■□□□□ 0.92
PCDHB10-201ENST00000239446 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
PCDHB10-201ENST00000239446 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
PCDHB10-201ENST00000239446 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
PCDHB10-201ENST00000239446 SOGA1O94964 1423 aa20.75■□□□□ 0.91
PCDHB10-201ENST00000239446 MYT1Q01538 1121 aa20.73■□□□□ 0.91
PCDHB10-201ENST00000239446 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
PCDHB10-201ENST00000239446 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
PCDHB10-201ENST00000239446 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
PCDHB10-201ENST00000239446 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
PCDHB10-201ENST00000239446 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
PCDHB10-201ENST00000239446 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
PCDHB10-201ENST00000239446 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
PCDHB10-201ENST00000239446 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
PCDHB10-201ENST00000239446 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
PCDHB10-201ENST00000239446 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
PCDHB10-201ENST00000239446 CENPBP07199 599 aaPredicted RBP20.55■□□□□ 0.88
PCDHB10-201ENST00000239446 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
PCDHB10-201ENST00000239446 APLP2Q06481 763 aa20.44■□□□□ 0.86
PCDHB10-201ENST00000239446 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
PCDHB10-201ENST00000239446 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
PCDHB10-201ENST00000239446 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
PCDHB10-201ENST00000239446 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
PCDHB10-201ENST00000239446 EEA1Q15075 1411 aa20.29■□□□□ 0.84
PCDHB10-201ENST00000239446 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
PCDHB10-201ENST00000239446 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
PCDHB10-201ENST00000239446 ITGAEP38570 1179 aa20.26■□□□□ 0.83
PCDHB10-201ENST00000239446 CLIP1P30622 1438 aa20.24■□□□□ 0.83
PCDHB10-201ENST00000239446 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
PCDHB10-201ENST00000239446 MIER1Q8N108 512 aa20.21■□□□□ 0.83
PCDHB10-201ENST00000239446 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
PCDHB10-201ENST00000239446 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PCDHB10-201ENST00000239446 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
PCDHB10-201ENST00000239446 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
PCDHB10-201ENST00000239446 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
PCDHB10-201ENST00000239446 ATP1B4Q9UN42 357 aaPredicted RBP20.05■□□□□ 0.8
PCDHB10-201ENST00000239446 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
PCDHB10-201ENST00000239446 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
PCDHB10-201ENST00000239446 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
PCDHB10-201ENST00000239446 NESP48681 1621 aa19.96■□□□□ 0.79
PCDHB10-201ENST00000239446 TOP2BQ02880 1626 aa19.93■□□□□ 0.78
PCDHB10-201ENST00000239446 CFTRP13569 1480 aa19.93■□□□□ 0.78
PCDHB10-201ENST00000239446 KIF21BO75037 1637 aa19.93■□□□□ 0.78
PCDHB10-201ENST00000239446 CUX1P39880 1505 aa19.92■□□□□ 0.78
PCDHB10-201ENST00000239446 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
PCDHB10-201ENST00000239446 CUX2O14529 1486 aa19.85■□□□□ 0.77
PCDHB10-201ENST00000239446 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
PCDHB10-201ENST00000239446 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
PCDHB10-201ENST00000239446 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
PCDHB10-201ENST00000239446 BCL11AQ9H165 835 aa19.77■□□□□ 0.75
PCDHB10-201ENST00000239446 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
PCDHB10-201ENST00000239446 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
PCDHB10-201ENST00000239446 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
PCDHB10-201ENST00000239446 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
PCDHB10-201ENST00000239446 IGF1RP08069 1367 aa19.72■□□□□ 0.75
PCDHB10-201ENST00000239446 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
PCDHB10-201ENST00000239446 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
PCDHB10-201ENST00000239446 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
PCDHB10-201ENST00000239446 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
PCDHB10-201ENST00000239446 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms