RNA–Protein interactions for RNA: ENST00000341676.9

ATP13A2-202, Transcript of ATPase cation transporting 13A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A2, Length 3,681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A2-202ENST00000341676 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
ATP13A2-202ENST00000341676 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
ATP13A2-202ENST00000341676 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
ATP13A2-202ENST00000341676 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
ATP13A2-202ENST00000341676 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
ATP13A2-202ENST00000341676 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
ATP13A2-202ENST00000341676 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
ATP13A2-202ENST00000341676 HRCP23327 699 aa23.81■■□□□ 1.4
ATP13A2-202ENST00000341676 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
ATP13A2-202ENST00000341676 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
ATP13A2-202ENST00000341676 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
ATP13A2-202ENST00000341676 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
ATP13A2-202ENST00000341676 FAM9AQ8IZU1 332 aaPredicted RBP23.64■■□□□ 1.37
ATP13A2-202ENST00000341676 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
ATP13A2-202ENST00000341676 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
ATP13A2-202ENST00000341676 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
ATP13A2-202ENST00000341676 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
ATP13A2-202ENST00000341676 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
ATP13A2-202ENST00000341676 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
ATP13A2-202ENST00000341676 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
ATP13A2-202ENST00000341676 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
ATP13A2-202ENST00000341676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
ATP13A2-202ENST00000341676 ABCC9O60706 1549 aa22.61■■□□□ 1.21
ATP13A2-202ENST00000341676 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
ATP13A2-202ENST00000341676 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
ATP13A2-202ENST00000341676 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
ATP13A2-202ENST00000341676 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
ATP13A2-202ENST00000341676 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
ATP13A2-202ENST00000341676 YTHDC1Q96MU7 727 aaKnown RBP22.21■■□□□ 1.15
ATP13A2-202ENST00000341676 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.15
ATP13A2-202ENST00000341676 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
ATP13A2-202ENST00000341676 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
ATP13A2-202ENST00000341676 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
ATP13A2-202ENST00000341676 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
ATP13A2-202ENST00000341676 APLP2Q06481 763 aa22.09■■□□□ 1.13
ATP13A2-202ENST00000341676 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
ATP13A2-202ENST00000341676 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
ATP13A2-202ENST00000341676 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
ATP13A2-202ENST00000341676 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
ATP13A2-202ENST00000341676 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
ATP13A2-202ENST00000341676 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
ATP13A2-202ENST00000341676 WIZO95785 1651 aa21.91■■□□□ 1.1
ATP13A2-202ENST00000341676 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
ATP13A2-202ENST00000341676 NACADO15069 1562 aa21.79■■□□□ 1.08
ATP13A2-202ENST00000341676 SOGA1O94964 1423 aa21.77■■□□□ 1.08
ATP13A2-202ENST00000341676 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
ATP13A2-202ENST00000341676 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
ATP13A2-202ENST00000341676 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
ATP13A2-202ENST00000341676 ITGAEP38570 1179 aa21.71■■□□□ 1.07
ATP13A2-202ENST00000341676 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
ATP13A2-202ENST00000341676 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.05
ATP13A2-202ENST00000341676 MIER1Q8N108 512 aa21.57■■□□□ 1.04
ATP13A2-202ENST00000341676 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
ATP13A2-202ENST00000341676 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
ATP13A2-202ENST00000341676 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
ATP13A2-202ENST00000341676 CLIP1P30622 1438 aa21.42■■□□□ 1.02
ATP13A2-202ENST00000341676 GOLGA3Q08378 1498 aa21.41■■□□□ 1.02
ATP13A2-202ENST00000341676 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
ATP13A2-202ENST00000341676 EEA1Q15075 1411 aa21.33■■□□□ 1
ATP13A2-202ENST00000341676 SMARCA4P51532 1647 aa21.29■■□□□ 1
ATP13A2-202ENST00000341676 SMARCA2P51531 1590 aa21.28■■□□□ 1
ATP13A2-202ENST00000341676 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
ATP13A2-202ENST00000341676 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
ATP13A2-202ENST00000341676 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
ATP13A2-202ENST00000341676 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
ATP13A2-202ENST00000341676 BCANQ96GW7 911 aa21.13■□□□□ 0.97
ATP13A2-202ENST00000341676 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
ATP13A2-202ENST00000341676 VPS8Q8N3P4 1428 aa21.11■□□□□ 0.97
ATP13A2-202ENST00000341676 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
ATP13A2-202ENST00000341676 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
ATP13A2-202ENST00000341676 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
ATP13A2-202ENST00000341676 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
ATP13A2-202ENST00000341676 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
ATP13A2-202ENST00000341676 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
ATP13A2-202ENST00000341676 MYT1Q01538 1121 aa20.9■□□□□ 0.94
ATP13A2-202ENST00000341676 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
ATP13A2-202ENST00000341676 NEFLP07196 543 aa20.88■□□□□ 0.93
ATP13A2-202ENST00000341676 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
ATP13A2-202ENST00000341676 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
ATP13A2-202ENST00000341676 SUPT16HQ9Y5B9 1047 aaKnown RBP20.83■□□□□ 0.93
ATP13A2-202ENST00000341676 KIF21BO75037 1637 aa20.81■□□□□ 0.92
ATP13A2-202ENST00000341676 TRIM52Q96A61 297 aa20.81■□□□□ 0.92
ATP13A2-202ENST00000341676 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
ATP13A2-202ENST00000341676 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
ATP13A2-202ENST00000341676 FKBP8Q14318 412 aa20.8■□□□□ 0.92
ATP13A2-202ENST00000341676 CCNB3Q8WWL7 1395 aa20.79■□□□□ 0.92
ATP13A2-202ENST00000341676 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
ATP13A2-202ENST00000341676 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
ATP13A2-202ENST00000341676 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
ATP13A2-202ENST00000341676 ANP32CO43423 234 aa20.71■□□□□ 0.91
ATP13A2-202ENST00000341676 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
ATP13A2-202ENST00000341676 RAB3GAP2Q9H2M9 1393 aa20.69■□□□□ 0.9
ATP13A2-202ENST00000341676 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
ATP13A2-202ENST00000341676 CUX2O14529 1486 aa20.65■□□□□ 0.9
ATP13A2-202ENST00000341676 POLR3GLQ9BT43 218 aa20.6■□□□□ 0.89
ATP13A2-202ENST00000341676 CHIC2Q9UKJ5 165 aa20.6■□□□□ 0.89
ATP13A2-202ENST00000341676 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.89
ATP13A2-202ENST00000341676 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
ATP13A2-202ENST00000341676 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
ATP13A2-202ENST00000341676 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms