RNA–Protein interactions for RNA: ENST00000416615.5

AP000552.1-203, humanhuman

TSL 5 BASIC

Gene AP000552.1, Length 1,930 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000552.1-203ENST00000416615 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
AP000552.1-203ENST00000416615 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
AP000552.1-203ENST00000416615 ABCC9O60706 1549 aa29.07■■■□□ 2.24
AP000552.1-203ENST00000416615 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
AP000552.1-203ENST00000416615 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
AP000552.1-203ENST00000416615 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
AP000552.1-203ENST00000416615 NACADO15069 1562 aa28.11■■■□□ 2.09
AP000552.1-203ENST00000416615 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
AP000552.1-203ENST00000416615 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
AP000552.1-203ENST00000416615 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
AP000552.1-203ENST00000416615 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
AP000552.1-203ENST00000416615 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
AP000552.1-203ENST00000416615 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
AP000552.1-203ENST00000416615 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
AP000552.1-203ENST00000416615 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
AP000552.1-203ENST00000416615 MROH2BQ7Z745 1585 aa26.52■■□□□ 1.84
AP000552.1-203ENST00000416615 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
AP000552.1-203ENST00000416615 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
AP000552.1-203ENST00000416615 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
AP000552.1-203ENST00000416615 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
AP000552.1-203ENST00000416615 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
AP000552.1-203ENST00000416615 WIZO95785 1651 aa26.29■■□□□ 1.8
AP000552.1-203ENST00000416615 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
AP000552.1-203ENST00000416615 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
AP000552.1-203ENST00000416615 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
AP000552.1-203ENST00000416615 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
AP000552.1-203ENST00000416615 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
AP000552.1-203ENST00000416615 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
AP000552.1-203ENST00000416615 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
AP000552.1-203ENST00000416615 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
AP000552.1-203ENST00000416615 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
AP000552.1-203ENST00000416615 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
AP000552.1-203ENST00000416615 NESP48681 1621 aa25.38■■□□□ 1.65
AP000552.1-203ENST00000416615 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
AP000552.1-203ENST00000416615 CFTRP13569 1480 aa25.28■■□□□ 1.64
AP000552.1-203ENST00000416615 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
AP000552.1-203ENST00000416615 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
AP000552.1-203ENST00000416615 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
AP000552.1-203ENST00000416615 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
AP000552.1-203ENST00000416615 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
AP000552.1-203ENST00000416615 KIF21AQ7Z4S6 1674 aa25■■□□□ 1.59
AP000552.1-203ENST00000416615 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
AP000552.1-203ENST00000416615 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
AP000552.1-203ENST00000416615 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
AP000552.1-203ENST00000416615 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
AP000552.1-203ENST00000416615 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
AP000552.1-203ENST00000416615 CUX1P39880 1505 aa24.82■■□□□ 1.56
AP000552.1-203ENST00000416615 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
AP000552.1-203ENST00000416615 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
AP000552.1-203ENST00000416615 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
AP000552.1-203ENST00000416615 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
AP000552.1-203ENST00000416615 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
AP000552.1-203ENST00000416615 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
AP000552.1-203ENST00000416615 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
AP000552.1-203ENST00000416615 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
AP000552.1-203ENST00000416615 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
AP000552.1-203ENST00000416615 WDR62O43379 1518 aa24.63■■□□□ 1.53
AP000552.1-203ENST00000416615 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
AP000552.1-203ENST00000416615 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
AP000552.1-203ENST00000416615 CUX2O14529 1486 aa24.48■■□□□ 1.51
AP000552.1-203ENST00000416615 SOGA1O94964 1423 aa24.48■■□□□ 1.51
AP000552.1-203ENST00000416615 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
AP000552.1-203ENST00000416615 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
AP000552.1-203ENST00000416615 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
AP000552.1-203ENST00000416615 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
AP000552.1-203ENST00000416615 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
AP000552.1-203ENST00000416615 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
AP000552.1-203ENST00000416615 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
AP000552.1-203ENST00000416615 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
AP000552.1-203ENST00000416615 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
AP000552.1-203ENST00000416615 KIF27Q86VH2 1401 aa24.26■■□□□ 1.47
AP000552.1-203ENST00000416615 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
AP000552.1-203ENST00000416615 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
AP000552.1-203ENST00000416615 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
AP000552.1-203ENST00000416615 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.46
AP000552.1-203ENST00000416615 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
AP000552.1-203ENST00000416615 IGF1RP08069 1367 aa24.13■■□□□ 1.45
AP000552.1-203ENST00000416615 EEA1Q15075 1411 aa24.13■■□□□ 1.45
AP000552.1-203ENST00000416615 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
AP000552.1-203ENST00000416615 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
AP000552.1-203ENST00000416615 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
AP000552.1-203ENST00000416615 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
AP000552.1-203ENST00000416615 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
AP000552.1-203ENST00000416615 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
AP000552.1-203ENST00000416615 RAPGEF2Q9Y4G8 1499 aa23.98■■□□□ 1.43
AP000552.1-203ENST00000416615 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
AP000552.1-203ENST00000416615 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
AP000552.1-203ENST00000416615 FBLN2P98095 1184 aa23.94■■□□□ 1.42
AP000552.1-203ENST00000416615 CUL7Q14999 1698 aa23.92■■□□□ 1.42
AP000552.1-203ENST00000416615 KIF21BO75037 1637 aa23.9■■□□□ 1.42
AP000552.1-203ENST00000416615 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
AP000552.1-203ENST00000416615 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.42
AP000552.1-203ENST00000416615 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
AP000552.1-203ENST00000416615 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
AP000552.1-203ENST00000416615 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
AP000552.1-203ENST00000416615 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
AP000552.1-203ENST00000416615 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
AP000552.1-203ENST00000416615 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
AP000552.1-203ENST00000416615 CHD1O14646 1710 aa23.77■■□□□ 1.4
AP000552.1-203ENST00000416615 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms