RNA–Protein interactions for RNA: ENST00000020926.7

SYT13-201, Transcript of synaptotagmin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYT13, Length 5,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT13-201ENST00000020926 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
SYT13-201ENST00000020926 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
SYT13-201ENST00000020926 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
SYT13-201ENST00000020926 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
SYT13-201ENST00000020926 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
SYT13-201ENST00000020926 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.46
SYT13-201ENST00000020926 APLP2Q06481 763 aa23.96■■□□□ 1.43
SYT13-201ENST00000020926 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
SYT13-201ENST00000020926 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
SYT13-201ENST00000020926 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
SYT13-201ENST00000020926 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
SYT13-201ENST00000020926 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
SYT13-201ENST00000020926 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
SYT13-201ENST00000020926 ABCC9O60706 1549 aa23.21■■□□□ 1.31
SYT13-201ENST00000020926 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
SYT13-201ENST00000020926 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
SYT13-201ENST00000020926 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
SYT13-201ENST00000020926 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
SYT13-201ENST00000020926 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
SYT13-201ENST00000020926 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
SYT13-201ENST00000020926 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
SYT13-201ENST00000020926 PABPN1Q86U42 306 aaKnown RBP eCLIP22.89■■□□□ 1.25
SYT13-201ENST00000020926 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
SYT13-201ENST00000020926 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
SYT13-201ENST00000020926 HRCP23327 699 aa22.59■■□□□ 1.21
SYT13-201ENST00000020926 ITGAEP38570 1179 aa22.55■■□□□ 1.2
SYT13-201ENST00000020926 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
SYT13-201ENST00000020926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
SYT13-201ENST00000020926 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
SYT13-201ENST00000020926 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
SYT13-201ENST00000020926 SCRIBQ14160 1630 aa22.39■■□□□ 1.18
SYT13-201ENST00000020926 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
SYT13-201ENST00000020926 NEFLP07196 543 aa22.18■■□□□ 1.14
SYT13-201ENST00000020926 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
SYT13-201ENST00000020926 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
SYT13-201ENST00000020926 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
SYT13-201ENST00000020926 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
SYT13-201ENST00000020926 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.09
SYT13-201ENST00000020926 FBLN2P98095 1184 aa21.88■■□□□ 1.09
SYT13-201ENST00000020926 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
SYT13-201ENST00000020926 TRIM52Q96A61 297 aa21.86■■□□□ 1.09
SYT13-201ENST00000020926 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
SYT13-201ENST00000020926 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
SYT13-201ENST00000020926 NEUROD1Q13562 356 aa21.79■■□□□ 1.08
SYT13-201ENST00000020926 NACADO15069 1562 aa21.76■■□□□ 1.07
SYT13-201ENST00000020926 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
SYT13-201ENST00000020926 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
SYT13-201ENST00000020926 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
SYT13-201ENST00000020926 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
SYT13-201ENST00000020926 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
SYT13-201ENST00000020926 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
SYT13-201ENST00000020926 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
SYT13-201ENST00000020926 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
SYT13-201ENST00000020926 ZNF777Q9ULD5 760 aaPredicted RBP21.44■■□□□ 1.02
SYT13-201ENST00000020926 ANP32CO43423 234 aa21.41■■□□□ 1.02
SYT13-201ENST00000020926 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
SYT13-201ENST00000020926 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
SYT13-201ENST00000020926 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
SYT13-201ENST00000020926 EEA1Q15075 1411 aa21.36■■□□□ 1.01
SYT13-201ENST00000020926 CLIP1P30622 1438 aa21.36■■□□□ 1.01
SYT13-201ENST00000020926 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
SYT13-201ENST00000020926 DAXXQ9UER7 740 aaPredicted RBP21.28■■□□□ 1
SYT13-201ENST00000020926 GOLGA3Q08378 1498 aa21.28■■□□□ 1
SYT13-201ENST00000020926 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
SYT13-201ENST00000020926 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
SYT13-201ENST00000020926 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
SYT13-201ENST00000020926 MTUS2Q5JR59 1369 aa21.18■□□□□ 0.98
SYT13-201ENST00000020926 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
SYT13-201ENST00000020926 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
SYT13-201ENST00000020926 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
SYT13-201ENST00000020926 MYT1Q01538 1121 aa21.14■□□□□ 0.97
SYT13-201ENST00000020926 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
SYT13-201ENST00000020926 BCANQ96GW7 911 aa21.13■□□□□ 0.97
SYT13-201ENST00000020926 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
SYT13-201ENST00000020926 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
SYT13-201ENST00000020926 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
SYT13-201ENST00000020926 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
SYT13-201ENST00000020926 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
SYT13-201ENST00000020926 TSPY4P0CV99 314 aa21■□□□□ 0.95
SYT13-201ENST00000020926 TSPY10P0CW01 314 aa21■□□□□ 0.95
SYT13-201ENST00000020926 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
SYT13-201ENST00000020926 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
SYT13-201ENST00000020926 SOGA1O94964 1423 aa20.95■□□□□ 0.94
SYT13-201ENST00000020926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
SYT13-201ENST00000020926 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
SYT13-201ENST00000020926 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
SYT13-201ENST00000020926 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
SYT13-201ENST00000020926 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
SYT13-201ENST00000020926 PLEKHD1A6NEE1 506 aa20.86■□□□□ 0.93
SYT13-201ENST00000020926 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
SYT13-201ENST00000020926 CUX2O14529 1486 aa20.84■□□□□ 0.93
SYT13-201ENST00000020926 WIZO95785 1651 aa20.82■□□□□ 0.92
SYT13-201ENST00000020926 NEFMP07197 916 aa20.82■□□□□ 0.92
SYT13-201ENST00000020926 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
SYT13-201ENST00000020926 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
SYT13-201ENST00000020926 CANXP27824 592 aaKnown RBP20.81■□□□□ 0.92
SYT13-201ENST00000020926 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
SYT13-201ENST00000020926 KDM2AQ9Y2K7 1162 aa20.8■□□□□ 0.92
SYT13-201ENST00000020926 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
SYT13-201ENST00000020926 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms