RNA–Protein interactions for RNA: ENST00000239440.8

ARAP3-201, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARAP3, Length 5,250 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP3-201ENST00000239440 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
ARAP3-201ENST00000239440 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
ARAP3-201ENST00000239440 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
ARAP3-201ENST00000239440 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
ARAP3-201ENST00000239440 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
ARAP3-201ENST00000239440 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
ARAP3-201ENST00000239440 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
ARAP3-201ENST00000239440 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
ARAP3-201ENST00000239440 APLP2Q06481 763 aa21.99■■□□□ 1.11
ARAP3-201ENST00000239440 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
ARAP3-201ENST00000239440 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
ARAP3-201ENST00000239440 ABCC9O60706 1549 aa21.73■■□□□ 1.07
ARAP3-201ENST00000239440 CENPBP07199 599 aaPredicted RBP21.65■■□□□ 1.06
ARAP3-201ENST00000239440 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
ARAP3-201ENST00000239440 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
ARAP3-201ENST00000239440 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
ARAP3-201ENST00000239440 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
ARAP3-201ENST00000239440 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
ARAP3-201ENST00000239440 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
ARAP3-201ENST00000239440 HRCP23327 699 aa21.33■■□□□ 1.01
ARAP3-201ENST00000239440 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
ARAP3-201ENST00000239440 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
ARAP3-201ENST00000239440 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
ARAP3-201ENST00000239440 MYT1Q01538 1121 aa21.11■□□□□ 0.97
ARAP3-201ENST00000239440 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
ARAP3-201ENST00000239440 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
ARAP3-201ENST00000239440 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
ARAP3-201ENST00000239440 NEFLP07196 543 aa20.98■□□□□ 0.95
ARAP3-201ENST00000239440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
ARAP3-201ENST00000239440 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
ARAP3-201ENST00000239440 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
ARAP3-201ENST00000239440 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
ARAP3-201ENST00000239440 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
ARAP3-201ENST00000239440 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.9
ARAP3-201ENST00000239440 ITGAEP38570 1179 aa20.59■□□□□ 0.89
ARAP3-201ENST00000239440 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
ARAP3-201ENST00000239440 FBLN2P98095 1184 aa20.43■□□□□ 0.86
ARAP3-201ENST00000239440 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
ARAP3-201ENST00000239440 NACADO15069 1562 aa20.26■□□□□ 0.83
ARAP3-201ENST00000239440 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
ARAP3-201ENST00000239440 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
ARAP3-201ENST00000239440 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
ARAP3-201ENST00000239440 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
ARAP3-201ENST00000239440 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
ARAP3-201ENST00000239440 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
ARAP3-201ENST00000239440 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
ARAP3-201ENST00000239440 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
ARAP3-201ENST00000239440 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
ARAP3-201ENST00000239440 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.8
ARAP3-201ENST00000239440 CNGB1Q14028 1251 aaPredicted RBP20.01■□□□□ 0.79
ARAP3-201ENST00000239440 ARID3CA6NKF2 412 aa19.98■□□□□ 0.79
ARAP3-201ENST00000239440 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
ARAP3-201ENST00000239440 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
ARAP3-201ENST00000239440 ANP32CO43423 234 aa19.93■□□□□ 0.78
ARAP3-201ENST00000239440 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
ARAP3-201ENST00000239440 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
ARAP3-201ENST00000239440 BCANQ96GW7 911 aa19.88■□□□□ 0.77
ARAP3-201ENST00000239440 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
ARAP3-201ENST00000239440 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
ARAP3-201ENST00000239440 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
ARAP3-201ENST00000239440 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
ARAP3-201ENST00000239440 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
ARAP3-201ENST00000239440 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
ARAP3-201ENST00000239440 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
ARAP3-201ENST00000239440 ZNF326Q5BKZ1 582 aaKnown RBP19.69■□□□□ 0.74
ARAP3-201ENST00000239440 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
ARAP3-201ENST00000239440 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
ARAP3-201ENST00000239440 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
ARAP3-201ENST00000239440 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
ARAP3-201ENST00000239440 EEA1Q15075 1411 aa19.55■□□□□ 0.72
ARAP3-201ENST00000239440 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
ARAP3-201ENST00000239440 CLIP1P30622 1438 aa19.49■□□□□ 0.71
ARAP3-201ENST00000239440 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
ARAP3-201ENST00000239440 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
ARAP3-201ENST00000239440 FKBP8Q14318 412 aa19.47■□□□□ 0.71
ARAP3-201ENST00000239440 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
ARAP3-201ENST00000239440 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
ARAP3-201ENST00000239440 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
ARAP3-201ENST00000239440 ANP32AP39687 249 aaKnown RBP19.43■□□□□ 0.7
ARAP3-201ENST00000239440 TSPY4P0CV99 314 aa19.4■□□□□ 0.7
ARAP3-201ENST00000239440 TSPY10P0CW01 314 aa19.4■□□□□ 0.7
ARAP3-201ENST00000239440 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
ARAP3-201ENST00000239440 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
ARAP3-201ENST00000239440 DDX10Q13206 875 aaKnown RBP19.38■□□□□ 0.69
ARAP3-201ENST00000239440 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
ARAP3-201ENST00000239440 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
ARAP3-201ENST00000239440 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
ARAP3-201ENST00000239440 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.69
ARAP3-201ENST00000239440 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
ARAP3-201ENST00000239440 MIER1Q8N108 512 aa19.33■□□□□ 0.69
ARAP3-201ENST00000239440 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
ARAP3-201ENST00000239440 KCNH8Q96L42 1107 aa19.31■□□□□ 0.68
ARAP3-201ENST00000239440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
ARAP3-201ENST00000239440 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
ARAP3-201ENST00000239440 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
ARAP3-201ENST00000239440 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
ARAP3-201ENST00000239440 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
ARAP3-201ENST00000239440 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
ARAP3-201ENST00000239440 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
ARAP3-201ENST00000239440 CUX2O14529 1486 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms