RNA–Protein interactions for RNA: ENST00000315033.4

GPR88-201, Transcript of G protein-coupled receptor 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPR88, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPR88-201ENST00000315033 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
GPR88-201ENST00000315033 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
GPR88-201ENST00000315033 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
GPR88-201ENST00000315033 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
GPR88-201ENST00000315033 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
GPR88-201ENST00000315033 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
GPR88-201ENST00000315033 HRCP23327 699 aa23.17■■□□□ 1.3
GPR88-201ENST00000315033 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
GPR88-201ENST00000315033 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
GPR88-201ENST00000315033 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
GPR88-201ENST00000315033 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
GPR88-201ENST00000315033 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
GPR88-201ENST00000315033 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
GPR88-201ENST00000315033 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
GPR88-201ENST00000315033 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
GPR88-201ENST00000315033 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
GPR88-201ENST00000315033 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
GPR88-201ENST00000315033 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
GPR88-201ENST00000315033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
GPR88-201ENST00000315033 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
GPR88-201ENST00000315033 ZEB1P37275 1124 aaPredicted RBP21.78■■□□□ 1.08
GPR88-201ENST00000315033 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
GPR88-201ENST00000315033 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
GPR88-201ENST00000315033 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
GPR88-201ENST00000315033 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
GPR88-201ENST00000315033 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
GPR88-201ENST00000315033 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
GPR88-201ENST00000315033 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
GPR88-201ENST00000315033 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
GPR88-201ENST00000315033 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
GPR88-201ENST00000315033 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
GPR88-201ENST00000315033 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
GPR88-201ENST00000315033 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
GPR88-201ENST00000315033 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
GPR88-201ENST00000315033 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
GPR88-201ENST00000315033 MIER1Q8N108 512 aa20.92■□□□□ 0.94
GPR88-201ENST00000315033 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
GPR88-201ENST00000315033 ABCC9O60706 1549 aa20.86■□□□□ 0.93
GPR88-201ENST00000315033 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
GPR88-201ENST00000315033 APLP2Q06481 763 aa20.75■□□□□ 0.91
GPR88-201ENST00000315033 ITGAEP38570 1179 aa20.66■□□□□ 0.9
GPR88-201ENST00000315033 BCANQ96GW7 911 aa20.62■□□□□ 0.89
GPR88-201ENST00000315033 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
GPR88-201ENST00000315033 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
GPR88-201ENST00000315033 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
GPR88-201ENST00000315033 MYT1Q01538 1121 aa20.57■□□□□ 0.88
GPR88-201ENST00000315033 SOGA1O94964 1423 aa20.56■□□□□ 0.88
GPR88-201ENST00000315033 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
GPR88-201ENST00000315033 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
GPR88-201ENST00000315033 WIZO95785 1651 aa20.49■□□□□ 0.87
GPR88-201ENST00000315033 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
GPR88-201ENST00000315033 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
GPR88-201ENST00000315033 NACADO15069 1562 aa20.37■□□□□ 0.85
GPR88-201ENST00000315033 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
GPR88-201ENST00000315033 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
GPR88-201ENST00000315033 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
GPR88-201ENST00000315033 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
GPR88-201ENST00000315033 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
GPR88-201ENST00000315033 FKBP8Q14318 412 aa20.17■□□□□ 0.82
GPR88-201ENST00000315033 CLIP1P30622 1438 aa20.16■□□□□ 0.82
GPR88-201ENST00000315033 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
GPR88-201ENST00000315033 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
GPR88-201ENST00000315033 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
GPR88-201ENST00000315033 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
GPR88-201ENST00000315033 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.81
GPR88-201ENST00000315033 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
GPR88-201ENST00000315033 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
GPR88-201ENST00000315033 NEFLP07196 543 aa20.03■□□□□ 0.8
GPR88-201ENST00000315033 CNGB1Q14028 1251 aaPredicted RBP20.01■□□□□ 0.79
GPR88-201ENST00000315033 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
GPR88-201ENST00000315033 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
GPR88-201ENST00000315033 ANP32EQ9BTT0 268 aa19.97■□□□□ 0.79
GPR88-201ENST00000315033 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
GPR88-201ENST00000315033 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
GPR88-201ENST00000315033 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
GPR88-201ENST00000315033 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
GPR88-201ENST00000315033 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
GPR88-201ENST00000315033 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
GPR88-201ENST00000315033 BCL11AQ9H165 835 aa19.86■□□□□ 0.77
GPR88-201ENST00000315033 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
GPR88-201ENST00000315033 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
GPR88-201ENST00000315033 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
GPR88-201ENST00000315033 EEA1Q15075 1411 aa19.84■□□□□ 0.77
GPR88-201ENST00000315033 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
GPR88-201ENST00000315033 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
GPR88-201ENST00000315033 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
GPR88-201ENST00000315033 RBM19Q9Y4C8 960 aaKnown RBP19.77■□□□□ 0.76
GPR88-201ENST00000315033 ANP32CO43423 234 aa19.75■□□□□ 0.75
GPR88-201ENST00000315033 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
GPR88-201ENST00000315033 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
GPR88-201ENST00000315033 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
GPR88-201ENST00000315033 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
GPR88-201ENST00000315033 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
GPR88-201ENST00000315033 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
GPR88-201ENST00000315033 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
GPR88-201ENST00000315033 KIF21BO75037 1637 aa19.62■□□□□ 0.73
GPR88-201ENST00000315033 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
GPR88-201ENST00000315033 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
GPR88-201ENST00000315033 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
GPR88-201ENST00000315033 NBR1Q14596 966 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms