Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 LMBR1-203ENST00000414218 451 ntTSL 519.76■□□□□ 0.753e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-208ENST00000434278 678 ntTSL 519.13■□□□□ 0.653e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-209ENST00000434453 2229 ntTSL 518.76■□□□□ 0.593e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-216ENST00000510483 719 ntTSL 418.58■□□□□ 0.563e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-209ENST00000502749 790 ntTSL 518.1■□□□□ 0.493e-6■□□□□ 8.3
SRSF1Q07955 NARF-219ENST00000582585 891 ntTSL 517.79■□□□□ 0.446e-8■□□□□ 8.3
SRSF1Q07955 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.33e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-213ENST00000508603 538 ntTSL 415.82■□□□□ 0.123e-6■□□□□ 8.3
SRSF1Q07955 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.39■□□□□ 0.053e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-213ENST00000454132 2922 ntTSL 215.04■□□□□ -03e-6■□□□□ 8.3
SRSF1Q07955 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.026e-8■□□□□ 8.3
SRSF1Q07955 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.096e-8■□□□□ 8.3
SRSF1Q07955 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.35□□□□□ -0.116e-8■□□□□ 8.3
SRSF1Q07955 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.143e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.45□□□□□ -0.263e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.263e-6■□□□□ 8.3
SRSF1Q07955 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.36e-8■□□□□ 8.3
SRSF1Q07955 ZNF451-206ENST00000370711 609 ntTSL 412.89□□□□□ -0.353e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.413e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)12.05□□□□□ -0.483e-6■□□□□ 8.3
SRSF1Q07955 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.483e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC11.79□□□□□ -0.523e-6■□□□□ 8.3
SRSF1Q07955 TFRC-208ENST00000464011 546 ntTSL 411.74□□□□□ -0.532e-14■□□□□ 8.3
SRSF1Q07955 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.613e-6■□□□□ 8.3
SRSF1Q07955 CCAR1-202ENST00000398676 565 ntTSL 39.44□□□□□ -0.96e-8■□□□□ 8.3
SRSF1Q07955 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.153e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC6.75□□□□□ -1.333e-6■□□□□ 8.3
SRSF1Q07955 TRIM44-202ENST00000532066 637 ntTSL 46.18□□□□□ -1.423e-6■□□□□ 8.3
SRSF1Q07955 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.423e-6■□□□□ 8.3
SRSF1Q07955 CD46-213ENST00000471987 572 ntTSL 35.65□□□□□ -1.53e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-211ENST00000504603 561 ntTSL 55.62□□□□□ -1.513e-6■□□□□ 8.3
SRSF1Q07955 CD46-216ENST00000490278 747 ntTSL 24.2□□□□□ -1.743e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-218ENST00000515290 581 ntTSL 43.79□□□□□ -1.83e-6■□□□□ 8.3
SRSF1Q07955 CD46-215ENST00000488596 872 ntTSL 33.52□□□□□ -1.853e-6■□□□□ 8.3
SRSF1Q07955 CD46-210ENST00000462968 473 ntTSL 33.34□□□□□ -1.873e-6■□□□□ 8.3
SRSF1Q07955 CD46-219ENST00000636114 2098 ntTSL 52.36□□□□□ -2.033e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.083e-6■□□□□ 8.3
SRSF1Q07955 MIR3652-201ENST00000579335 131 ntBASIC17.45■□□□□ 0.382e-9■□□□□ 8.3
SRSF1Q07955 FTCD-205ENST00000446405 436 ntTSL 318.11■□□□□ 0.491e-10■□□□□ 8.3
SRSF1Q07955 FTCD-209ENST00000483568 398 ntTSL 59.57□□□□□ -0.881e-10■□□□□ 8.3
SRSF1Q07955 DDX41-202ENST00000503078 2375 ntTSL 218.81■□□□□ 0.62e-6■□□□□ 8.3
SRSF1Q07955 DDX41-217ENST00000515562 1184 ntTSL 1 (best)16.69■□□□□ 0.262e-6■□□□□ 8.3
SRSF1Q07955 DDX41-201ENST00000330503 2137 ntTSL 1 (best)13.58□□□□□ -0.232e-6■□□□□ 8.3
SRSF1Q07955 DDX41-206ENST00000506965 560 ntTSL 513.37□□□□□ -0.272e-6■□□□□ 8.3
SRSF1Q07955 DDX41-210ENST00000509576 819 ntTSL 313.37□□□□□ -0.272e-6■□□□□ 8.3
SRSF1Q07955 DDX41-215ENST00000512431 904 ntTSL 513.01□□□□□ -0.332e-6■□□□□ 8.3
SRSF1Q07955 DDX41-205ENST00000505081 2949 ntTSL 212.14□□□□□ -0.472e-6■□□□□ 8.3
SRSF1Q07955 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.642e-6■□□□□ 8.3
SRSF1Q07955 DDX41-219ENST00000629036 606 ntTSL 4 BASIC10.73□□□□□ -0.692e-6■□□□□ 8.3
SRSF1Q07955 DDX41-211ENST00000510171 569 ntTSL 310.45□□□□□ -0.742e-6■□□□□ 8.3
SRSF1Q07955 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.541e-6■□□□□ 8.3
SRSF1Q07955 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.491e-6■□□□□ 8.3
SRSF1Q07955 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.411e-6■□□□□ 8.3
SRSF1Q07955 WWC2-207ENST00000508614 604 ntTSL 316.88■□□□□ 0.291e-6■□□□□ 8.3
SRSF1Q07955 CCNT2-206ENST00000446247 663 ntTSL 515.21■□□□□ 0.031e-8■□□□□ 8.3
SRSF1Q07955 CCNT2-210ENST00000475094 606 ntTSL 214.74□□□□□ -0.051e-8■□□□□ 8.3
SRSF1Q07955 MAGI2-216ENST00000628997 641 ntTSL 313.2□□□□□ -0.31e-6■□□□□ 8.3
SRSF1Q07955 CCNT2-203ENST00000417175 811 ntTSL 312.83□□□□□ -0.361e-8■□□□□ 8.3
SRSF1Q07955 CCNT2-204ENST00000419781 5414 ntTSL 1 (best)12.64□□□□□ -0.391e-8■□□□□ 8.3
SRSF1Q07955 GPT2-204ENST00000562801 2092 ntTSL 212.52□□□□□ -0.41e-6■□□□□ 8.3
SRSF1Q07955 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.481e-6■□□□□ 8.3
SRSF1Q07955 SRSF1-202ENST00000578430 689 ntTSL 211.63□□□□□ -0.551e-6■□□□□ 8.3
SRSF1Q07955 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-6■□□□□ 8.3
SRSF1Q07955 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC9.7□□□□□ -0.861e-6■□□□□ 8.3
SRSF1Q07955 CCNT2-208ENST00000452839 2363 ntTSL 29.67□□□□□ -0.861e-8■□□□□ 8.3
SRSF1Q07955 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC9.6□□□□□ -0.871e-6■□□□□ 8.3
SRSF1Q07955 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC8.74□□□□□ -1.011e-6■□□□□ 8.3
SRSF1Q07955 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC8.37□□□□□ -1.071e-6■□□□□ 8.3
SRSF1Q07955 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.161e-6■□□□□ 8.3
SRSF1Q07955 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)7.59□□□□□ -1.191e-6■□□□□ 8.3
SRSF1Q07955 CCNT2-209ENST00000464932 723 ntTSL 36.65□□□□□ -1.341e-8■□□□□ 8.3
SRSF1Q07955 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.18□□□□□ -1.421e-8■□□□□ 8.3
SRSF1Q07955 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.821e-8■□□□□ 8.3
SRSF1Q07955 MAGI2-225ENST00000636234 5702 ntTSL 53.31□□□□□ -1.881e-6■□□□□ 8.3
SRSF1Q07955 P3H1-210ENST00000463465 897 ntTSL 319.9■□□□□ 0.782e-7■□□□□ 8.3
SRSF1Q07955 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.152e-7■□□□□ 8.3
SRSF1Q07955 P3H1-207ENST00000460031 2726 ntTSL 512.85□□□□□ -0.352e-7■□□□□ 8.3
SRSF1Q07955 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.422e-7■□□□□ 8.3
SRSF1Q07955 P3H1-214ENST00000495874 2813 ntTSL 211.99□□□□□ -0.492e-7■□□□□ 8.3
SRSF1Q07955 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.542e-7■□□□□ 8.3
SRSF1Q07955 P3H1-212ENST00000481465 728 ntTSL 28.66□□□□□ -1.022e-7■□□□□ 8.3
SRSF1Q07955 P3H1-205ENST00000431412 836 ntTSL 58.47□□□□□ -1.052e-7■□□□□ 8.3
SRSF1Q07955 P3H1-206ENST00000447502 453 ntTSL 37.16□□□□□ -1.262e-7■□□□□ 8.3
SRSF1Q07955 OTULIN-204ENST00000507335 742 ntTSL 225.24■■□□□ 1.633e-6■□□□□ 8.3
SRSF1Q07955 COL27A1-208ENST00000494780 514 ntTSL 422.72■■□□□ 1.233e-9■□□□□ 8.3
SRSF1Q07955 DEK-207ENST00000515742 661 ntTSL 220.96■□□□□ 0.953e-6■□□□□ 8.3
SRSF1Q07955 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.873e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.46■□□□□ 0.873e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-204ENST00000535542 951 ntTSL 320.15■□□□□ 0.823e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.88■□□□□ 0.613e-6■□□□□ 8.3
SRSF1Q07955 OTULIN-202ENST00000503023 911 ntTSL 518.61■□□□□ 0.573e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.443e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-214ENST00000543023 845 ntTSL 317.7■□□□□ 0.423e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.363e-6■□□□□ 8.3
SRSF1Q07955 CHMP4A-203ENST00000527154 571 ntTSL 217.05■□□□□ 0.323e-6■□□□□ 8.3
SRSF1Q07955 SRM-206ENST00000490101 461 ntTSL 216.97■□□□□ 0.313e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.92■□□□□ 0.33e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.283e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.223e-6■□□□□ 8.3
SRSF1Q07955 TELO2-207ENST00000568240 1327 ntTSL 1 (best)15.92■□□□□ 0.143e-6■□□□□ 8.3
Retrieved 100 of 14,836 protein–RNA pairs in 50.4 ms