RNA–Protein interactions for RNA: ENST00000327284.12

SENP6-201, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2 BASIC

Gene SENP6, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-201ENST00000327284 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
SENP6-201ENST00000327284 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
SENP6-201ENST00000327284 SUPT5HO00267 1087 aaKnown RBP33.32■■■□□ 2.93
SENP6-201ENST00000327284 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
SENP6-201ENST00000327284 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
SENP6-201ENST00000327284 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
SENP6-201ENST00000327284 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
SENP6-201ENST00000327284 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
SENP6-201ENST00000327284 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
SENP6-201ENST00000327284 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
SENP6-201ENST00000327284 PCGF6Q9BYE7 350 aa31.44■■■□□ 2.62
SENP6-201ENST00000327284 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
SENP6-201ENST00000327284 HRCP23327 699 aa31.24■■■□□ 2.59
SENP6-201ENST00000327284 ABCC9O60706 1549 aa31.14■■■□□ 2.58
SENP6-201ENST00000327284 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
SENP6-201ENST00000327284 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
SENP6-201ENST00000327284 FAM9AQ8IZU1 332 aaPredicted RBP30.89■■■□□ 2.54
SENP6-201ENST00000327284 EHMT2Q96KQ7 1210 aa30.87■■■□□ 2.53
SENP6-201ENST00000327284 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
SENP6-201ENST00000327284 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
SENP6-201ENST00000327284 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
SENP6-201ENST00000327284 TRIM26Q12899 539 aaPredicted RBP30.55■■■□□ 2.48
SENP6-201ENST00000327284 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
SENP6-201ENST00000327284 NACADO15069 1562 aa30.53■■■□□ 2.48
SENP6-201ENST00000327284 WIZO95785 1651 aa30.38■■■□□ 2.45
SENP6-201ENST00000327284 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
SENP6-201ENST00000327284 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
SENP6-201ENST00000327284 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
SENP6-201ENST00000327284 TTBK1Q5TCY1 1321 aaPredicted RBP29.82■■■□□ 2.36
SENP6-201ENST00000327284 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
SENP6-201ENST00000327284 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
SENP6-201ENST00000327284 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
SENP6-201ENST00000327284 ZEB1P37275 1124 aaPredicted RBP29.71■■■□□ 2.35
SENP6-201ENST00000327284 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.35
SENP6-201ENST00000327284 UNC13AQ9UPW8 1703 aa29.7■■■□□ 2.34
SENP6-201ENST00000327284 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
SENP6-201ENST00000327284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
SENP6-201ENST00000327284 SOGA1O94964 1423 aa29.6■■■□□ 2.33
SENP6-201ENST00000327284 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
SENP6-201ENST00000327284 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
SENP6-201ENST00000327284 CCER1Q8TC90 406 aaPredicted RBP29.42■■■□□ 2.3
SENP6-201ENST00000327284 BICRAQ9NZM4 1560 aa29.38■■■□□ 2.29
SENP6-201ENST00000327284 CEP162Q5TB80 1403 aa29.38■■■□□ 2.29
SENP6-201ENST00000327284 CSRNP3Q8WYN3 585 aa29.37■■■□□ 2.29
SENP6-201ENST00000327284 TNIKQ9UKE5 1360 aa29.21■■■□□ 2.27
SENP6-201ENST00000327284 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
SENP6-201ENST00000327284 RANGAP1P46060 587 aaPredicted RBP29.17■■■□□ 2.26
SENP6-201ENST00000327284 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
SENP6-201ENST00000327284 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
SENP6-201ENST00000327284 EEA1Q15075 1411 aa29.04■■■□□ 2.24
SENP6-201ENST00000327284 GOLGA3Q08378 1498 aa29.02■■■□□ 2.24
SENP6-201ENST00000327284 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
SENP6-201ENST00000327284 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
SENP6-201ENST00000327284 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.22
SENP6-201ENST00000327284 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
SENP6-201ENST00000327284 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
SENP6-201ENST00000327284 CLIP1P30622 1438 aa28.82■■■□□ 2.2
SENP6-201ENST00000327284 DIEXFQ68CQ4 756 aaKnown RBP28.81■■■□□ 2.2
SENP6-201ENST00000327284 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
SENP6-201ENST00000327284 KIF21BO75037 1637 aa28.68■■■□□ 2.18
SENP6-201ENST00000327284 APLP2Q06481 763 aa28.67■■■□□ 2.18
SENP6-201ENST00000327284 NEUROD1Q13562 356 aa28.65■■■□□ 2.18
SENP6-201ENST00000327284 VPS8Q8N3P4 1428 aa28.61■■■□□ 2.17
SENP6-201ENST00000327284 ACIN1Q9UKV3 1341 aaKnown RBP28.54■■■□□ 2.16
SENP6-201ENST00000327284 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
SENP6-201ENST00000327284 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
SENP6-201ENST00000327284 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
SENP6-201ENST00000327284 YTHDC1Q96MU7 727 aaKnown RBP28.41■■■□□ 2.14
SENP6-201ENST00000327284 CUX1P39880 1505 aa28.39■■■□□ 2.14
SENP6-201ENST00000327284 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
SENP6-201ENST00000327284 GTF3C3Q9Y5Q9 886 aa28.35■■■□□ 2.13
SENP6-201ENST00000327284 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
SENP6-201ENST00000327284 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
SENP6-201ENST00000327284 ARAP1Q96P48 1450 aa28.3■■■□□ 2.12
SENP6-201ENST00000327284 CENPBP07199 599 aaPredicted RBP28.28■■■□□ 2.12
SENP6-201ENST00000327284 MIER1Q8N108 512 aa28.28■■■□□ 2.12
SENP6-201ENST00000327284 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
SENP6-201ENST00000327284 KIF27Q86VH2 1401 aa28.24■■■□□ 2.11
SENP6-201ENST00000327284 ITGAEP38570 1179 aa28.23■■■□□ 2.11
SENP6-201ENST00000327284 CFTRP13569 1480 aa28.2■■■□□ 2.11
SENP6-201ENST00000327284 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
SENP6-201ENST00000327284 CUX2O14529 1486 aa28.08■■■□□ 2.09
SENP6-201ENST00000327284 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
SENP6-201ENST00000327284 ARHGAP35Q9NRY4 1499 aa28.06■■■□□ 2.08
SENP6-201ENST00000327284 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
SENP6-201ENST00000327284 IGF1RP08069 1367 aa28.02■■■□□ 2.08
SENP6-201ENST00000327284 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
SENP6-201ENST00000327284 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.07
SENP6-201ENST00000327284 CARMIL1Q5VZK9 1371 aa27.91■■■□□ 2.06
SENP6-201ENST00000327284 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
SENP6-201ENST00000327284 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
SENP6-201ENST00000327284 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
SENP6-201ENST00000327284 RRBP1Q9P2E9 1410 aaKnown RBP27.89■■■□□ 2.06
SENP6-201ENST00000327284 FAM50AQ14320 339 aaKnown RBP27.78■■■□□ 2.04
SENP6-201ENST00000327284 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
SENP6-201ENST00000327284 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
SENP6-201ENST00000327284 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
SENP6-201ENST00000327284 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
SENP6-201ENST00000327284 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
SENP6-201ENST00000327284 PHLDB1Q86UU1 1377 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms