RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 AEBP2Q6ZN18 517 aaPredicted RBP35.06■■■■□ 3.2
CCAR1-202ENST00000398676 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
CCAR1-202ENST00000398676 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
CCAR1-202ENST00000398676 SENP3Q9H4L4 574 aaPredicted RBP29.86■■■□□ 2.37
CCAR1-202ENST00000398676 PLPPR3Q6T4P5 718 aa27.71■■■□□ 2.03
CCAR1-202ENST00000398676 FOXD1Q16676 465 aa27.68■■■□□ 2.02
CCAR1-202ENST00000398676 ADRA2BP18089 450 aa26.5■■□□□ 1.83
CCAR1-202ENST00000398676 PPP6R1Q9UPN7 881 aa26.5■■□□□ 1.83
CCAR1-202ENST00000398676 PIAS4Q8N2W9 510 aaPredicted RBP26.12■■□□□ 1.77
CCAR1-202ENST00000398676 MSH5O43196 834 aa25.64■■□□□ 1.7
CCAR1-202ENST00000398676 PPP4R3CPQ6ZMV5 832 aa24.39■■□□□ 1.49
CCAR1-202ENST00000398676 SCAF1Q9H7N4 1312 aaKnown RBP24.34■■□□□ 1.49
CCAR1-202ENST00000398676 MAPK8IP2Q13387 824 aaPredicted RBP24.08■■□□□ 1.45
CCAR1-202ENST00000398676 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
CCAR1-202ENST00000398676 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
CCAR1-202ENST00000398676 CNKSR2Q8WXI2 1034 aa23.75■■□□□ 1.39
CCAR1-202ENST00000398676 KCNA4P22459 653 aa23.63■■□□□ 1.37
CCAR1-202ENST00000398676 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
CCAR1-202ENST00000398676 NPM3O75607 178 aaKnown RBP23.34■■□□□ 1.33
CCAR1-202ENST00000398676 RNF216Q9NWF9 866 aaPredicted RBP23.31■■□□□ 1.32
CCAR1-202ENST00000398676 HOXD11P31277 338 aaPredicted RBP23.22■■□□□ 1.31
CCAR1-202ENST00000398676 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
CCAR1-202ENST00000398676 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
CCAR1-202ENST00000398676 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.2
CCAR1-202ENST00000398676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.143e-7■■■■■ 41.9
CCAR1-202ENST00000398676 SLC4A2P04920 1241 aa22.04■■□□□ 1.12
CCAR1-202ENST00000398676 RNF39Q9H2S5 420 aa21.91■■□□□ 1.1
CCAR1-202ENST00000398676 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
CCAR1-202ENST00000398676 U3KPZ7 1027 aaPredicted RBP21.76■■□□□ 1.07
CCAR1-202ENST00000398676 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
CCAR1-202ENST00000398676 ZBTB22O15209 634 aa21.7■■□□□ 1.06
CCAR1-202ENST00000398676 C1QBPQ07021 282 aaKnown RBP21.68■■□□□ 1.06
CCAR1-202ENST00000398676 MYCNP04198 464 aaPredicted RBP21.6■■□□□ 1.05
CCAR1-202ENST00000398676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
CCAR1-202ENST00000398676 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
CCAR1-202ENST00000398676 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
CCAR1-202ENST00000398676 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
CCAR1-202ENST00000398676 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
CCAR1-202ENST00000398676 APLP2Q06481 763 aa21.35■■□□□ 1.01
CCAR1-202ENST00000398676 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
CCAR1-202ENST00000398676 CAPN15O75808 1086 aa21.18■□□□□ 0.98
CCAR1-202ENST00000398676 ATXN8OSP0DMR3 200 aa21.08■□□□□ 0.97
CCAR1-202ENST00000398676 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
CCAR1-202ENST00000398676 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
CCAR1-202ENST00000398676 ATF5Q9Y2D1 282 aaPredicted RBP20.97■□□□□ 0.95
CCAR1-202ENST00000398676 DSG3P32926 999 aa20.8■□□□□ 0.92
CCAR1-202ENST00000398676 ABCB7O75027 752 aa20.74■□□□□ 0.91
CCAR1-202ENST00000398676 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
CCAR1-202ENST00000398676 POLA2Q14181 598 aa20.65■□□□□ 0.9
CCAR1-202ENST00000398676 ABCC9O60706 1549 aa20.48■□□□□ 0.87
CCAR1-202ENST00000398676 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
CCAR1-202ENST00000398676 FBLN2P98095 1184 aa20.21■□□□□ 0.83
CCAR1-202ENST00000398676 MKRN4PQ13434 485 aaPredicted RBP20.06■□□□□ 0.8
CCAR1-202ENST00000398676 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
CCAR1-202ENST00000398676 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
CCAR1-202ENST00000398676 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.77
CCAR1-202ENST00000398676 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
CCAR1-202ENST00000398676 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
CCAR1-202ENST00000398676 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
CCAR1-202ENST00000398676 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
CCAR1-202ENST00000398676 SPDYE4A6NLX3 237 aa19.6■□□□□ 0.73
CCAR1-202ENST00000398676 AKT1S1Q96B36 256 aa19.59■□□□□ 0.73
CCAR1-202ENST00000398676 SSUH2Q9Y2M2 353 aa19.54■□□□□ 0.72
CCAR1-202ENST00000398676 FKBP8Q14318 412 aa19.48■□□□□ 0.71
CCAR1-202ENST00000398676 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCAR1-202ENST00000398676 REM2Q8IYK8 340 aaPredicted RBP19.39■□□□□ 0.69
CCAR1-202ENST00000398676 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
CCAR1-202ENST00000398676 SPDYE1Q8NFV5 336 aaPredicted RBP19.21■□□□□ 0.67
CCAR1-202ENST00000398676 PROM2Q8N271 834 aa19.19■□□□□ 0.66
CCAR1-202ENST00000398676 PITPNM1O00562 1244 aa19.16■□□□□ 0.66
CCAR1-202ENST00000398676 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
CCAR1-202ENST00000398676 CHRDL2Q6WN34 429 aa19.09■□□□□ 0.65
CCAR1-202ENST00000398676 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
CCAR1-202ENST00000398676 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
CCAR1-202ENST00000398676 PRR29P0C7W0 189 aa18.96■□□□□ 0.63
CCAR1-202ENST00000398676 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
CCAR1-202ENST00000398676 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.62e-8■■■■□ 19.3
CCAR1-202ENST00000398676 PIP4P2Q8N4L2 257 aa18.8■□□□□ 0.6
CCAR1-202ENST00000398676 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
CCAR1-202ENST00000398676 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
CCAR1-202ENST00000398676 POTEHQ6S545 545 aa18.65■□□□□ 0.58
CCAR1-202ENST00000398676 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
CCAR1-202ENST00000398676 MIER1Q8N108 512 aa18.64■□□□□ 0.57
CCAR1-202ENST00000398676 CREBZFQ9NS37 354 aa18.62■□□□□ 0.57
CCAR1-202ENST00000398676 PLEKHG5O94827 1062 aa18.61■□□□□ 0.57
CCAR1-202ENST00000398676 PLCD3Q8N3E9 789 aa18.6■□□□□ 0.57
CCAR1-202ENST00000398676 VASPP50552 380 aaPredicted RBP18.57■□□□□ 0.56
CCAR1-202ENST00000398676 NACADO15069 1562 aa18.51■□□□□ 0.55
CCAR1-202ENST00000398676 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
CCAR1-202ENST00000398676 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
CCAR1-202ENST00000398676 FARP1Q9Y4F1 1045 aaPredicted RBP18.48■□□□□ 0.55
CCAR1-202ENST00000398676 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
CCAR1-202ENST00000398676 ZBTB47Q9UFB7 747 aaPredicted RBP18.42■□□□□ 0.54
CCAR1-202ENST00000398676 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCAR1-202ENST00000398676 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
CCAR1-202ENST00000398676 CUX2O14529 1486 aa18.36■□□□□ 0.53
CCAR1-202ENST00000398676 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
CCAR1-202ENST00000398676 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
CCAR1-202ENST00000398676 HAX1O00165 279 aa18.28■□□□□ 0.52
CCAR1-202ENST00000398676 IFNLR1Q8IU57 520 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms