RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
CHMP4A-203ENST00000527154 ABCC9O60706 1549 aa38.58■■■■□ 3.77
CHMP4A-203ENST00000527154 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
CHMP4A-203ENST00000527154 DNAJC5BQ9UF47 199 aa36.9■■■■□ 3.5
CHMP4A-203ENST00000527154 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
CHMP4A-203ENST00000527154 NACADO15069 1562 aa36.16■■■■□ 3.38
CHMP4A-203ENST00000527154 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
CHMP4A-203ENST00000527154 UNC13AQ9UPW8 1703 aa35.64■■■■□ 3.3
CHMP4A-203ENST00000527154 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
CHMP4A-203ENST00000527154 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
CHMP4A-203ENST00000527154 DCAF8L2P0C7V8 631 aa35.47■■■■□ 3.27
CHMP4A-203ENST00000527154 SHROOM4Q9ULL8 1493 aa35.1■■■■□ 3.21
CHMP4A-203ENST00000527154 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
CHMP4A-203ENST00000527154 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
CHMP4A-203ENST00000527154 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
CHMP4A-203ENST00000527154 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
CHMP4A-203ENST00000527154 EIF4G1Q04637 1599 aaKnown RBP34.69■■■■□ 3.14
CHMP4A-203ENST00000527154 SCRIBQ14160 1630 aa34.49■■■■□ 3.11
CHMP4A-203ENST00000527154 DNAJC5Q9H3Z4 198 aa34.39■■■■□ 3.1
CHMP4A-203ENST00000527154 CUX2O14529 1486 aa33.67■■■□□ 2.98
CHMP4A-203ENST00000527154 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
CHMP4A-203ENST00000527154 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
CHMP4A-203ENST00000527154 ATAD2BQ9ULI0 1458 aa33.19■■■□□ 2.9
CHMP4A-203ENST00000527154 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
CHMP4A-203ENST00000527154 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
CHMP4A-203ENST00000527154 NESP48681 1621 aa32.99■■■□□ 2.87
CHMP4A-203ENST00000527154 SMARCA4P51532 1647 aa32.95■■■□□ 2.86
CHMP4A-203ENST00000527154 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
CHMP4A-203ENST00000527154 PEG3Q9GZU2 1588 aa32.77■■■□□ 2.84
CHMP4A-203ENST00000527154 BAZ1BQ9UIG0 1483 aaKnown RBP32.75■■■□□ 2.83
CHMP4A-203ENST00000527154 LAMC3Q9Y6N6 1575 aa32.72■■■□□ 2.83
CHMP4A-203ENST00000527154 BAZ1AQ9NRL2 1556 aaPredicted RBP32.69■■■□□ 2.82
CHMP4A-203ENST00000527154 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
CHMP4A-203ENST00000527154 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
CHMP4A-203ENST00000527154 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
CHMP4A-203ENST00000527154 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
CHMP4A-203ENST00000527154 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
CHMP4A-203ENST00000527154 WDR62O43379 1518 aa32.3■■■□□ 2.76
CHMP4A-203ENST00000527154 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
CHMP4A-203ENST00000527154 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
CHMP4A-203ENST00000527154 OSCARQ8IYS5 282 aa31.92■■■□□ 2.7
CHMP4A-203ENST00000527154 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
CHMP4A-203ENST00000527154 WIZO95785 1651 aa31.9■■■□□ 2.7
CHMP4A-203ENST00000527154 CFTRP13569 1480 aa31.87■■■□□ 2.69
CHMP4A-203ENST00000527154 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
CHMP4A-203ENST00000527154 RIMBP3CA6NJZ7 1639 aa31.58■■■□□ 2.65
CHMP4A-203ENST00000527154 RIMBP3BA6NNM3 1639 aa31.58■■■□□ 2.65
CHMP4A-203ENST00000527154 RIMBP3Q9UFD9 1639 aa31.58■■■□□ 2.65
CHMP4A-203ENST00000527154 TOP2AP11388 1531 aaKnown RBP31.53■■■□□ 2.64
CHMP4A-203ENST00000527154 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
CHMP4A-203ENST00000527154 ARHGEF11O15085 1522 aa31.45■■■□□ 2.63
CHMP4A-203ENST00000527154 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
CHMP4A-203ENST00000527154 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
CHMP4A-203ENST00000527154 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
CHMP4A-203ENST00000527154 TOPBP1Q92547 1522 aa31.25■■■□□ 2.59
CHMP4A-203ENST00000527154 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
CHMP4A-203ENST00000527154 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
CHMP4A-203ENST00000527154 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
CHMP4A-203ENST00000527154 CYB5RLQ6IPT4 315 aa31.14■■■□□ 2.58
CHMP4A-203ENST00000527154 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
CHMP4A-203ENST00000527154 DNMBPQ6XZF7 1577 aa31.08■■■□□ 2.57
CHMP4A-203ENST00000527154 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
CHMP4A-203ENST00000527154 CHD1O14646 1710 aa31.02■■■□□ 2.56
CHMP4A-203ENST00000527154 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.568e-12■■■■■ 36.3
CHMP4A-203ENST00000527154 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
CHMP4A-203ENST00000527154 TRHP20396 242 aaPredicted RBP30.91■■■□□ 2.54
CHMP4A-203ENST00000527154 CLASP1Q7Z460 1538 aa30.81■■■□□ 2.52
CHMP4A-203ENST00000527154 FBLN2P98095 1184 aa30.76■■■□□ 2.51
CHMP4A-203ENST00000527154 WDR97A6NE52 1622 aa30.75■■■□□ 2.51
CHMP4A-203ENST00000527154 RAD54L2Q9Y4B4 1467 aa30.75■■■□□ 2.51
CHMP4A-203ENST00000527154 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
CHMP4A-203ENST00000527154 SOGA1O94964 1423 aa30.7■■■□□ 2.5
CHMP4A-203ENST00000527154 SNAPC4Q5SXM2 1469 aa30.69■■■□□ 2.5
CHMP4A-203ENST00000527154 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
CHMP4A-203ENST00000527154 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
CHMP4A-203ENST00000527154 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
CHMP4A-203ENST00000527154 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
CHMP4A-203ENST00000527154 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
CHMP4A-203ENST00000527154 SYNJ2O15056 1496 aa30.54■■■□□ 2.48
CHMP4A-203ENST00000527154 CUX1P39880 1505 aa30.47■■■□□ 2.47
CHMP4A-203ENST00000527154 AEBP2Q6ZN18 517 aaPredicted RBP30.47■■■□□ 2.47
CHMP4A-203ENST00000527154 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
CHMP4A-203ENST00000527154 PBRM1Q86U86 1689 aa30.29■■■□□ 2.44
CHMP4A-203ENST00000527154 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
CHMP4A-203ENST00000527154 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
CHMP4A-203ENST00000527154 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.42
CHMP4A-203ENST00000527154 NUP160Q12769 1436 aa30.17■■■□□ 2.42
CHMP4A-203ENST00000527154 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
CHMP4A-203ENST00000527154 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
CHMP4A-203ENST00000527154 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
CHMP4A-203ENST00000527154 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
CHMP4A-203ENST00000527154 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
CHMP4A-203ENST00000527154 KIF13AQ9H1H9 1805 aa29.95■■■□□ 2.39
CHMP4A-203ENST00000527154 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
CHMP4A-203ENST00000527154 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
CHMP4A-203ENST00000527154 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
CHMP4A-203ENST00000527154 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
CHMP4A-203ENST00000527154 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
CHMP4A-203ENST00000527154 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
CHMP4A-203ENST00000527154 MAPKBP1O60336 1514 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms