RNA–Protein interactions for RNA: ENST00000370010.6

SENP6-202, Transcript of SUMO specific peptidase 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SENP6, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-202ENST00000370010 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
SENP6-202ENST00000370010 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
SENP6-202ENST00000370010 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.65
SENP6-202ENST00000370010 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
SENP6-202ENST00000370010 EHMT2Q96KQ7 1210 aa29.56■■■□□ 2.32
SENP6-202ENST00000370010 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
SENP6-202ENST00000370010 ABCC9O60706 1549 aa29.48■■■□□ 2.31
SENP6-202ENST00000370010 PCGF6Q9BYE7 350 aa29.42■■■□□ 2.3
SENP6-202ENST00000370010 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
SENP6-202ENST00000370010 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
SENP6-202ENST00000370010 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
SENP6-202ENST00000370010 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
SENP6-202ENST00000370010 APLP2Q06481 763 aa28.94■■■□□ 2.22
SENP6-202ENST00000370010 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
SENP6-202ENST00000370010 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
SENP6-202ENST00000370010 UBTFP17480 764 aaKnown RBP28.62■■■□□ 2.17
SENP6-202ENST00000370010 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
SENP6-202ENST00000370010 MYT1Q01538 1121 aa28.52■■■□□ 2.16
SENP6-202ENST00000370010 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
SENP6-202ENST00000370010 HRCP23327 699 aa28.51■■■□□ 2.15
SENP6-202ENST00000370010 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
SENP6-202ENST00000370010 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
SENP6-202ENST00000370010 LOC105371045A0A1W2PR82 267 aa28.39■■■□□ 2.13
SENP6-202ENST00000370010 PPARGC1BQ86YN6 1023 aaKnown RBP28.3■■■□□ 2.12
SENP6-202ENST00000370010 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
SENP6-202ENST00000370010 ZEB1P37275 1124 aaPredicted RBP28.26■■■□□ 2.11
SENP6-202ENST00000370010 NACADO15069 1562 aa28.19■■■□□ 2.1
SENP6-202ENST00000370010 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
SENP6-202ENST00000370010 YTHDC1Q96MU7 727 aaKnown RBP28.14■■■□□ 2.09
SENP6-202ENST00000370010 TRIM26Q12899 539 aaPredicted RBP28.11■■■□□ 2.09
SENP6-202ENST00000370010 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
SENP6-202ENST00000370010 ATP1B4Q9UN42 357 aaPredicted RBP28.06■■■□□ 2.08
SENP6-202ENST00000370010 ERICH6Q7L0X2 663 aa27.88■■■□□ 2.05
SENP6-202ENST00000370010 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
SENP6-202ENST00000370010 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
SENP6-202ENST00000370010 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
SENP6-202ENST00000370010 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
SENP6-202ENST00000370010 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
SENP6-202ENST00000370010 HNRNPUL2Q1KMD3 747 aaKnown RBP27.37■■□□□ 1.97
SENP6-202ENST00000370010 ITGAEP38570 1179 aa27.32■■□□□ 1.96
SENP6-202ENST00000370010 NEFLP07196 543 aa27.31■■□□□ 1.96
SENP6-202ENST00000370010 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
SENP6-202ENST00000370010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.27■■□□□ 1.96
SENP6-202ENST00000370010 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
SENP6-202ENST00000370010 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
SENP6-202ENST00000370010 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
SENP6-202ENST00000370010 EEA1Q15075 1411 aa26.99■■□□□ 1.91
SENP6-202ENST00000370010 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
SENP6-202ENST00000370010 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
SENP6-202ENST00000370010 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
SENP6-202ENST00000370010 P3H3Q8IVL6 736 aa26.85■■□□□ 1.89
SENP6-202ENST00000370010 FBLN2P98095 1184 aa26.84■■□□□ 1.89
SENP6-202ENST00000370010 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
SENP6-202ENST00000370010 WIZO95785 1651 aa26.79■■□□□ 1.88
SENP6-202ENST00000370010 SMARCA2P51531 1590 aa26.79■■□□□ 1.88
SENP6-202ENST00000370010 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
SENP6-202ENST00000370010 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
SENP6-202ENST00000370010 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
SENP6-202ENST00000370010 CLIP1P30622 1438 aa26.69■■□□□ 1.86
SENP6-202ENST00000370010 MYT1LQ9UL68 1186 aa26.67■■□□□ 1.86
SENP6-202ENST00000370010 BCANQ96GW7 911 aa26.67■■□□□ 1.86
SENP6-202ENST00000370010 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
SENP6-202ENST00000370010 CEP162Q5TB80 1403 aa26.64■■□□□ 1.86
SENP6-202ENST00000370010 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
SENP6-202ENST00000370010 TNIKQ9UKE5 1360 aa26.62■■□□□ 1.85
SENP6-202ENST00000370010 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
SENP6-202ENST00000370010 TRIM52Q96A61 297 aa26.54■■□□□ 1.84
SENP6-202ENST00000370010 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
SENP6-202ENST00000370010 ABCC8Q09428 1581 aa26.51■■□□□ 1.83
SENP6-202ENST00000370010 NEUROD1Q13562 356 aa26.5■■□□□ 1.83
SENP6-202ENST00000370010 SOGA1O94964 1423 aa26.49■■□□□ 1.83
SENP6-202ENST00000370010 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
SENP6-202ENST00000370010 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
SENP6-202ENST00000370010 RTL5Q5HYW3 569 aaPredicted RBP26.33■■□□□ 1.81
SENP6-202ENST00000370010 POLR3GLQ9BT43 218 aa26.32■■□□□ 1.8
SENP6-202ENST00000370010 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
SENP6-202ENST00000370010 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
SENP6-202ENST00000370010 CNGB1Q14028 1251 aaPredicted RBP26.28■■□□□ 1.8
SENP6-202ENST00000370010 CUX2O14529 1486 aa26.27■■□□□ 1.8
SENP6-202ENST00000370010 DAXXQ9UER7 740 aaPredicted RBP26.24■■□□□ 1.79
SENP6-202ENST00000370010 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
SENP6-202ENST00000370010 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
SENP6-202ENST00000370010 ZNF777Q9ULD5 760 aaPredicted RBP26.2■■□□□ 1.78
SENP6-202ENST00000370010 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
SENP6-202ENST00000370010 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
SENP6-202ENST00000370010 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
SENP6-202ENST00000370010 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
SENP6-202ENST00000370010 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
SENP6-202ENST00000370010 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
SENP6-202ENST00000370010 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
SENP6-202ENST00000370010 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
SENP6-202ENST00000370010 CHIC2Q9UKJ5 165 aa25.95■■□□□ 1.75
SENP6-202ENST00000370010 TONSLQ96HA7 1378 aa25.94■■□□□ 1.74
SENP6-202ENST00000370010 ANP32CO43423 234 aa25.91■■□□□ 1.74
SENP6-202ENST00000370010 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SENP6-202ENST00000370010 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
SENP6-202ENST00000370010 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
SENP6-202ENST00000370010 NPM1P06748 294 aaKnown RBP eCLIP25.84■■□□□ 1.73
SENP6-202ENST00000370010 FKBP8Q14318 412 aa25.84■■□□□ 1.73
SENP6-202ENST00000370010 RAPGEF2Q9Y4G8 1499 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms