Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.182e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.83□□□□□ -1.82e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-211ENST00000515638 738 ntTSL 53.45□□□□□ -1.862e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-205ENST00000504472 588 ntTSL 43.14□□□□□ -1.912e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-210ENST00000511644 686 ntTSL 52.32□□□□□ -2.042e-9■□□□□ 10.1
DROSHAQ9NRR4 CACNA2D4-215ENST00000542340 558 ntTSL 330.8■■■□□ 2.521e-9■□□□□ 10.1
DROSHAQ9NRR4 CACNA2D4-211ENST00000540728 596 ntTSL 226.29■■□□□ 1.81e-9■□□□□ 10.1
DROSHAQ9NRR4 CACNA2D4-212ENST00000541331 498 ntTSL 426.29■■□□□ 1.81e-9■□□□□ 10.1
DROSHAQ9NRR4 PPFIA1-225ENST00000638133 814 ntTSL 322.72■■□□□ 1.232e-23■□□□□ 10
DROSHAQ9NRR4 PPFIA1-219ENST00000531657 3036 ntTSL 213.06□□□□□ -0.322e-23■□□□□ 10
DROSHAQ9NRR4 PPFIA1-206ENST00000526262 4537 ntTSL 1 (best)11.99□□□□□ -0.492e-23■□□□□ 10
DROSHAQ9NRR4 PPFIA1-204ENST00000525922 358 ntTSL 311.94□□□□□ -0.52e-23■□□□□ 10
DROSHAQ9NRR4 PPFIA1-215ENST00000530548 3774 ntTSL 210.47□□□□□ -0.732e-23■□□□□ 10
DROSHAQ9NRR4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.952e-23■□□□□ 10
DROSHAQ9NRR4 SNORD111-201ENST00000408139 94 ntBASIC0.48□□□□□ -2.332e-23■□□□□ 10
DROSHAQ9NRR4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.433e-10■□□□□ 10
DROSHAQ9NRR4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.113e-10■□□□□ 10
DROSHAQ9NRR4 CHTF18-216ENST00000565787 607 ntTSL 536.38■■■■□ 3.414e-8■□□□□ 10
DROSHAQ9NRR4 CHTF18-204ENST00000440239 1801 ntTSL 1 (best)35.1■■■■□ 3.214e-8■□□□□ 10
DROSHAQ9NRR4 CHTF18-218ENST00000569270 711 ntTSL 530.11■■■□□ 2.414e-8■□□□□ 10
DROSHAQ9NRR4 VPS9D1-203ENST00000563798 459 ntTSL 326.82■■□□□ 1.883e-7■□□□□ 10
DROSHAQ9NRR4 SH3BP2-229ENST00000515802 2247 ntTSL 222.4■■□□□ 1.183e-7■□□□□ 10
DROSHAQ9NRR4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.763e-7■□□□□ 10
DROSHAQ9NRR4 SH3BP2-209ENST00000504450 844 ntTSL 516.16■□□□□ 0.183e-7■□□□□ 10
DROSHAQ9NRR4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-7■□□□□ 10
DROSHAQ9NRR4 CTTN-212ENST00000527962 587 ntTSL 224.86■■□□□ 1.573e-7■□□□□ 10
DROSHAQ9NRR4 CTTN-208ENST00000498223 523 ntTSL 317.35■□□□□ 0.373e-7■□□□□ 10
DROSHAQ9NRR4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-6■□□□□ 10
DROSHAQ9NRR4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC35.08■■■■□ 3.212e-9■□□□□ 10
DROSHAQ9NRR4 SPIRE2-209ENST00000566337 1369 ntTSL 534.7■■■■□ 3.152e-9■□□□□ 10
DROSHAQ9NRR4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.592e-9■□□□□ 10
DROSHAQ9NRR4 SPIRE2-206ENST00000564878 663 ntTSL 327.63■■■□□ 2.012e-9■□□□□ 10
DROSHAQ9NRR4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.652e-9■□□□□ 10
DROSHAQ9NRR4 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.045e-28■□□□□ 10
DROSHAQ9NRR4 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC15.31■□□□□ 0.045e-28■□□□□ 10
DROSHAQ9NRR4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.495e-28■□□□□ 10
DROSHAQ9NRR4 COX7C-206ENST00000513124 693 ntTSL 57.3□□□□□ -1.245e-28■□□□□ 10
DROSHAQ9NRR4 COX7C-202ENST00000505430 496 ntTSL 32.99□□□□□ -1.935e-28■□□□□ 10
DROSHAQ9NRR4 COX7C-205ENST00000511472 369 ntTSL 22.32□□□□□ -2.045e-28■□□□□ 10
DROSHAQ9NRR4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.332e-14■□□□□ 10
DROSHAQ9NRR4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.73■■□□□ 1.552e-14■□□□□ 10
DROSHAQ9NRR4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC23.26■■□□□ 1.312e-14■□□□□ 10
DROSHAQ9NRR4 TRIM28-204ENST00000594806 861 ntTSL 539.52■■■■□ 3.925e-11■□□□□ 10
DROSHAQ9NRR4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.16■■■□□ 2.585e-11■□□□□ 10
DROSHAQ9NRR4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.365e-11■□□□□ 10
DROSHAQ9NRR4 TRIM28-203ENST00000593582 533 ntTSL 323.37■■□□□ 1.335e-11■□□□□ 10
DROSHAQ9NRR4 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.812e-12■□□□□ 9.9
DROSHAQ9NRR4 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC15.27■□□□□ 0.032e-12■□□□□ 9.9
DROSHAQ9NRR4 STRAP-206ENST00000541731 1698 ntTSL 215.15■□□□□ 0.022e-12■□□□□ 9.9
DROSHAQ9NRR4 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)18.3■□□□□ 0.525e-8■□□□□ 9.9
DROSHAQ9NRR4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.975e-12■□□□□ 9.9
DROSHAQ9NRR4 CCDC88A-211ENST00000471947 3713 ntTSL 1 (best)18.65■□□□□ 0.581e-12■□□□□ 9.9
DROSHAQ9NRR4 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC18.28■□□□□ 0.521e-12■□□□□ 9.9
DROSHAQ9NRR4 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC16.96■□□□□ 0.315e-8■□□□□ 9.9
DROSHAQ9NRR4 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC16.96■□□□□ 0.315e-8■□□□□ 9.9
DROSHAQ9NRR4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.766e-19■□□□□ 9.9
DROSHAQ9NRR4 COX5B-202ENST00000464949 613 ntTSL 531.75■■■□□ 2.676e-19■□□□□ 9.9
DROSHAQ9NRR4 ESYT2-205ENST00000497111 663 ntTSL 423.45■■□□□ 1.342e-10■□□□□ 9.9
DROSHAQ9NRR4 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC12.14□□□□□ -0.479e-48■□□□□ 9.9
DROSHAQ9NRR4 PICALM-223ENST00000534412 811 ntTSL 59.79□□□□□ -0.849e-48■□□□□ 9.9
DROSHAQ9NRR4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.13e-7■□□□□ 9.9
DROSHAQ9NRR4 PDCD4-205ENST00000467574 735 ntTSL 339.97■■■■□ 3.991e-6■□□□□ 9.9
DROSHAQ9NRR4 PDCD4-208ENST00000483670 774 ntTSL 539.62■■■■□ 3.931e-6■□□□□ 9.9
DROSHAQ9NRR4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC35.72■■■■□ 3.311e-6■□□□□ 9.9
DROSHAQ9NRR4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC33.53■■■□□ 2.961e-6■□□□□ 9.9
DROSHAQ9NRR4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.85e-8■□□□□ 9.9
DROSHAQ9NRR4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC32.28■■■□□ 2.765e-8■□□□□ 9.9
DROSHAQ9NRR4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.69■■■□□ 2.661e-6■□□□□ 9.9
DROSHAQ9NRR4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.511e-6■□□□□ 9.9
DROSHAQ9NRR4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.29■■■□□ 2.121e-6■□□□□ 9.9
DROSHAQ9NRR4 BTNL9-206ENST00000511056 332 ntTSL 328.11■■■□□ 2.091e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-212ENST00000510811 1376 ntTSL 228■■■□□ 2.076e-7■□□□□ 9.9
DROSHAQ9NRR4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC27.66■■■□□ 2.026e-7■□□□□ 9.9
DROSHAQ9NRR4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.996e-7■□□□□ 9.9
DROSHAQ9NRR4 NPRL3-203ENST00000422814 512 ntTSL 427.32■■□□□ 1.961e-6■□□□□ 9.9
DROSHAQ9NRR4 NPRL3-205ENST00000457916 936 ntTSL 527.32■■□□□ 1.961e-6■□□□□ 9.9
DROSHAQ9NRR4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC27.18■■□□□ 1.941e-6■□□□□ 9.9
DROSHAQ9NRR4 TCF25-211ENST00000563636 721 ntTSL 227.18■■□□□ 1.942e-9■□□□□ 9.9
DROSHAQ9NRR4 TRAM1-202ENST00000518678 535 ntTSL 427.14■■□□□ 1.941e-6■□□□□ 9.9
DROSHAQ9NRR4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC26.94■■□□□ 1.95e-28■□□□□ 9.9
DROSHAQ9NRR4 TRAM1-203ENST00000520700 542 ntTSL 526.75■■□□□ 1.871e-6■□□□□ 9.9
DROSHAQ9NRR4 PDCD4-203ENST00000444997 819 ntTSL 326.67■■□□□ 1.861e-6■□□□□ 9.9
DROSHAQ9NRR4 TSC2-221ENST00000568366 767 ntTSL 426.58■■□□□ 1.854e-9■□□□□ 9.9
DROSHAQ9NRR4 TRAM1-204ENST00000521049 872 ntTSL 526.22■■□□□ 1.791e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-209ENST00000505733 1703 ntTSL 226.22■■□□□ 1.796e-7■□□□□ 9.9
DROSHAQ9NRR4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.552e-17■□□□□ 9.9
DROSHAQ9NRR4 NPRL3-202ENST00000419636 616 ntTSL 524.64■■□□□ 1.531e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-210ENST00000507205 1215 ntTSL 224.42■■□□□ 1.51e-6■□□□□ 9.9
DROSHAQ9NRR4 ATXN2L-224ENST00000569318 559 ntTSL 524.41■■□□□ 1.52e-9■□□□□ 9.9
DROSHAQ9NRR4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.491e-6■□□□□ 9.9
DROSHAQ9NRR4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.26■■□□□ 1.471e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-216ENST00000561477 535 ntTSL 324.16■■□□□ 1.466e-7■□□□□ 9.9
DROSHAQ9NRR4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC24.15■■□□□ 1.465e-28■□□□□ 9.9
DROSHAQ9NRR4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.92■■□□□ 1.421e-6■□□□□ 9.9
DROSHAQ9NRR4 BTNL9-208ENST00000512570 885 ntTSL 523.81■■□□□ 1.41e-6■□□□□ 9.9
DROSHAQ9NRR4 BTNL9-203ENST00000491209 2199 ntTSL 223.73■■□□□ 1.391e-6■□□□□ 9.9
DROSHAQ9NRR4 CDK10-204ENST00000472018 2532 ntTSL 222.42■■□□□ 1.186e-7■□□□□ 9.9
DROSHAQ9NRR4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.171e-6■□□□□ 9.9
DROSHAQ9NRR4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.151e-6■□□□□ 9.9
DROSHAQ9NRR4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.112e-9■□□□□ 9.9
Retrieved 100 of 16,331 protein–RNA pairs in 305.5 ms