RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
VEGFB-202ENST00000426086 ABCC9O60706 1549 aa31.74■■■□□ 2.67
VEGFB-202ENST00000426086 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
VEGFB-202ENST00000426086 DNAJC5BQ9UF47 199 aa30.21■■■□□ 2.43
VEGFB-202ENST00000426086 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
VEGFB-202ENST00000426086 NACADO15069 1562 aa29.64■■■□□ 2.33
VEGFB-202ENST00000426086 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.316e-9■□□□□ 9.8
VEGFB-202ENST00000426086 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
VEGFB-202ENST00000426086 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
VEGFB-202ENST00000426086 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
VEGFB-202ENST00000426086 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
VEGFB-202ENST00000426086 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
VEGFB-202ENST00000426086 CC2D2AQ9P2K1 1620 aa28.62■■■□□ 2.17
VEGFB-202ENST00000426086 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
VEGFB-202ENST00000426086 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
VEGFB-202ENST00000426086 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
VEGFB-202ENST00000426086 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
VEGFB-202ENST00000426086 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
VEGFB-202ENST00000426086 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.06
VEGFB-202ENST00000426086 CUX2O14529 1486 aa27.41■■□□□ 1.98
VEGFB-202ENST00000426086 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
VEGFB-202ENST00000426086 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
VEGFB-202ENST00000426086 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
VEGFB-202ENST00000426086 NESP48681 1621 aa27.19■■□□□ 1.94
VEGFB-202ENST00000426086 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
VEGFB-202ENST00000426086 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
VEGFB-202ENST00000426086 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
VEGFB-202ENST00000426086 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
VEGFB-202ENST00000426086 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
VEGFB-202ENST00000426086 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
VEGFB-202ENST00000426086 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
VEGFB-202ENST00000426086 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
VEGFB-202ENST00000426086 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
VEGFB-202ENST00000426086 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
VEGFB-202ENST00000426086 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
VEGFB-202ENST00000426086 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
VEGFB-202ENST00000426086 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
VEGFB-202ENST00000426086 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
VEGFB-202ENST00000426086 WDR62O43379 1518 aa26.45■■□□□ 1.83
VEGFB-202ENST00000426086 WIZO95785 1651 aa26.45■■□□□ 1.82
VEGFB-202ENST00000426086 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
VEGFB-202ENST00000426086 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.79
VEGFB-202ENST00000426086 CFTRP13569 1480 aa26.18■■□□□ 1.78
VEGFB-202ENST00000426086 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
VEGFB-202ENST00000426086 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
VEGFB-202ENST00000426086 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
VEGFB-202ENST00000426086 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
VEGFB-202ENST00000426086 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
VEGFB-202ENST00000426086 RIMBP3CA6NJZ7 1639 aa25.87■■□□□ 1.73
VEGFB-202ENST00000426086 RIMBP3BA6NNM3 1639 aa25.87■■□□□ 1.73
VEGFB-202ENST00000426086 RIMBP3Q9UFD9 1639 aa25.87■■□□□ 1.73
VEGFB-202ENST00000426086 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
VEGFB-202ENST00000426086 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
VEGFB-202ENST00000426086 IFT140Q96RY7 1462 aa25.78■■□□□ 1.72
VEGFB-202ENST00000426086 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
VEGFB-202ENST00000426086 TOPBP1Q92547 1522 aa25.74■■□□□ 1.71
VEGFB-202ENST00000426086 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
VEGFB-202ENST00000426086 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
VEGFB-202ENST00000426086 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
VEGFB-202ENST00000426086 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.696e-9■■■■■ 33.6
VEGFB-202ENST00000426086 CHD1O14646 1710 aa25.55■■□□□ 1.68
VEGFB-202ENST00000426086 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
VEGFB-202ENST00000426086 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
VEGFB-202ENST00000426086 ARAP1Q96P48 1450 aa25.49■■□□□ 1.67
VEGFB-202ENST00000426086 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
VEGFB-202ENST00000426086 FBLN2P98095 1184 aa25.44■■□□□ 1.66
VEGFB-202ENST00000426086 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
VEGFB-202ENST00000426086 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
VEGFB-202ENST00000426086 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
VEGFB-202ENST00000426086 SOGA1O94964 1423 aa25.31■■□□□ 1.64
VEGFB-202ENST00000426086 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
VEGFB-202ENST00000426086 CLASP1Q7Z460 1538 aa25.25■■□□□ 1.63
VEGFB-202ENST00000426086 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
VEGFB-202ENST00000426086 CUX1P39880 1505 aa25.19■■□□□ 1.62
VEGFB-202ENST00000426086 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
VEGFB-202ENST00000426086 WDR97A6NE52 1622 aa25.14■■□□□ 1.61
VEGFB-202ENST00000426086 MAGI1Q96QZ7 1491 aaPredicted RBP25.13■■□□□ 1.61
VEGFB-202ENST00000426086 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
VEGFB-202ENST00000426086 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
VEGFB-202ENST00000426086 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
VEGFB-202ENST00000426086 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
VEGFB-202ENST00000426086 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
VEGFB-202ENST00000426086 ABCA5Q8WWZ7 1642 aa24.92■■□□□ 1.58
VEGFB-202ENST00000426086 ERCC6L2Q5T890 1561 aa24.91■■□□□ 1.58
VEGFB-202ENST00000426086 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
VEGFB-202ENST00000426086 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
VEGFB-202ENST00000426086 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
VEGFB-202ENST00000426086 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
VEGFB-202ENST00000426086 NUP160Q12769 1436 aa24.76■■□□□ 1.55
VEGFB-202ENST00000426086 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
VEGFB-202ENST00000426086 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
VEGFB-202ENST00000426086 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
VEGFB-202ENST00000426086 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
VEGFB-202ENST00000426086 SUPT5HO00267 1087 aaKnown RBP24.64■■□□□ 1.54
VEGFB-202ENST00000426086 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
VEGFB-202ENST00000426086 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
VEGFB-202ENST00000426086 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
VEGFB-202ENST00000426086 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
VEGFB-202ENST00000426086 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
VEGFB-202ENST00000426086 JPH4Q96JJ6 628 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms