RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
CTTN-208ENST00000498223 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
CTTN-208ENST00000498223 ABCC9O60706 1549 aa23.64■■□□□ 1.37
CTTN-208ENST00000498223 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
CTTN-208ENST00000498223 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
CTTN-208ENST00000498223 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
CTTN-208ENST00000498223 NACADO15069 1562 aa22.43■■□□□ 1.18
CTTN-208ENST00000498223 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
CTTN-208ENST00000498223 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
CTTN-208ENST00000498223 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
CTTN-208ENST00000498223 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
CTTN-208ENST00000498223 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
CTTN-208ENST00000498223 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
CTTN-208ENST00000498223 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
CTTN-208ENST00000498223 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
CTTN-208ENST00000498223 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
CTTN-208ENST00000498223 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
CTTN-208ENST00000498223 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
CTTN-208ENST00000498223 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
CTTN-208ENST00000498223 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
CTTN-208ENST00000498223 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
CTTN-208ENST00000498223 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
CTTN-208ENST00000498223 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
CTTN-208ENST00000498223 WIZO95785 1651 aa20.69■□□□□ 0.9
CTTN-208ENST00000498223 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
CTTN-208ENST00000498223 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
CTTN-208ENST00000498223 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
CTTN-208ENST00000498223 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
CTTN-208ENST00000498223 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
CTTN-208ENST00000498223 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
CTTN-208ENST00000498223 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
CTTN-208ENST00000498223 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
CTTN-208ENST00000498223 CUX2O14529 1486 aa20.37■□□□□ 0.85
CTTN-208ENST00000498223 NESP48681 1621 aa20.32■□□□□ 0.84
CTTN-208ENST00000498223 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
CTTN-208ENST00000498223 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
CTTN-208ENST00000498223 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
CTTN-208ENST00000498223 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
CTTN-208ENST00000498223 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
CTTN-208ENST00000498223 THOC2Q8NI27 1593 aaKnown RBP20.09■□□□□ 0.81
CTTN-208ENST00000498223 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
CTTN-208ENST00000498223 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
CTTN-208ENST00000498223 CFTRP13569 1480 aa19.95■□□□□ 0.78
CTTN-208ENST00000498223 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
CTTN-208ENST00000498223 WDR62O43379 1518 aa19.87■□□□□ 0.77
CTTN-208ENST00000498223 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
CTTN-208ENST00000498223 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
CTTN-208ENST00000498223 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
CTTN-208ENST00000498223 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
CTTN-208ENST00000498223 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
CTTN-208ENST00000498223 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
CTTN-208ENST00000498223 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
CTTN-208ENST00000498223 CUX1P39880 1505 aa19.52■□□□□ 0.72
CTTN-208ENST00000498223 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
CTTN-208ENST00000498223 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
CTTN-208ENST00000498223 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
CTTN-208ENST00000498223 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
CTTN-208ENST00000498223 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
CTTN-208ENST00000498223 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CTTN-208ENST00000498223 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
CTTN-208ENST00000498223 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
CTTN-208ENST00000498223 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
CTTN-208ENST00000498223 SOGA1O94964 1423 aa19.34■□□□□ 0.69
CTTN-208ENST00000498223 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
CTTN-208ENST00000498223 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
CTTN-208ENST00000498223 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
CTTN-208ENST00000498223 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
CTTN-208ENST00000498223 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
CTTN-208ENST00000498223 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.672e-9■■■■■ 27.5
CTTN-208ENST00000498223 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
CTTN-208ENST00000498223 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
CTTN-208ENST00000498223 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
CTTN-208ENST00000498223 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
CTTN-208ENST00000498223 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
CTTN-208ENST00000498223 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
CTTN-208ENST00000498223 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
CTTN-208ENST00000498223 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
CTTN-208ENST00000498223 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
CTTN-208ENST00000498223 FBLN2P98095 1184 aa19.11■□□□□ 0.65
CTTN-208ENST00000498223 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
CTTN-208ENST00000498223 CHD1O14646 1710 aa19.07■□□□□ 0.64
CTTN-208ENST00000498223 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
CTTN-208ENST00000498223 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
CTTN-208ENST00000498223 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
CTTN-208ENST00000498223 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
CTTN-208ENST00000498223 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
CTTN-208ENST00000498223 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
CTTN-208ENST00000498223 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
CTTN-208ENST00000498223 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
CTTN-208ENST00000498223 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
CTTN-208ENST00000498223 CUL7Q14999 1698 aa18.95■□□□□ 0.62
CTTN-208ENST00000498223 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
CTTN-208ENST00000498223 EEA1Q15075 1411 aa18.94■□□□□ 0.62
CTTN-208ENST00000498223 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
CTTN-208ENST00000498223 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
CTTN-208ENST00000498223 IGF1RP08069 1367 aa18.93■□□□□ 0.62
CTTN-208ENST00000498223 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
CTTN-208ENST00000498223 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
CTTN-208ENST00000498223 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
CTTN-208ENST00000498223 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms