RNA–Protein interactions for RNA: ENST00000525922.2

PPFIA1-204, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-204ENST00000525922 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
PPFIA1-204ENST00000525922 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
PPFIA1-204ENST00000525922 ABCC9O60706 1549 aa16.91■□□□□ 0.3
PPFIA1-204ENST00000525922 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
PPFIA1-204ENST00000525922 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
PPFIA1-204ENST00000525922 NACADO15069 1562 aa16.05■□□□□ 0.16
PPFIA1-204ENST00000525922 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
PPFIA1-204ENST00000525922 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
PPFIA1-204ENST00000525922 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
PPFIA1-204ENST00000525922 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
PPFIA1-204ENST00000525922 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
PPFIA1-204ENST00000525922 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
PPFIA1-204ENST00000525922 BICRAQ9NZM4 1560 aa15.6■□□□□ 0.09
PPFIA1-204ENST00000525922 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
PPFIA1-204ENST00000525922 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
PPFIA1-204ENST00000525922 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
PPFIA1-204ENST00000525922 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.03
PPFIA1-204ENST00000525922 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
PPFIA1-204ENST00000525922 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
PPFIA1-204ENST00000525922 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
PPFIA1-204ENST00000525922 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
PPFIA1-204ENST00000525922 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
PPFIA1-204ENST00000525922 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
PPFIA1-204ENST00000525922 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
PPFIA1-204ENST00000525922 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
PPFIA1-204ENST00000525922 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
PPFIA1-204ENST00000525922 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
PPFIA1-204ENST00000525922 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
PPFIA1-204ENST00000525922 NESP48681 1621 aa14.55□□□□□ -0.08
PPFIA1-204ENST00000525922 WIZO95785 1651 aa14.5□□□□□ -0.09
PPFIA1-204ENST00000525922 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
PPFIA1-204ENST00000525922 CUX2O14529 1486 aa14.47□□□□□ -0.09
PPFIA1-204ENST00000525922 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
PPFIA1-204ENST00000525922 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
PPFIA1-204ENST00000525922 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
PPFIA1-204ENST00000525922 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
PPFIA1-204ENST00000525922 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
PPFIA1-204ENST00000525922 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
PPFIA1-204ENST00000525922 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
PPFIA1-204ENST00000525922 CFTRP13569 1480 aa14.27□□□□□ -0.12
PPFIA1-204ENST00000525922 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
PPFIA1-204ENST00000525922 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
PPFIA1-204ENST00000525922 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
PPFIA1-204ENST00000525922 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
PPFIA1-204ENST00000525922 WDR62O43379 1518 aa14.18□□□□□ -0.14
PPFIA1-204ENST00000525922 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
PPFIA1-204ENST00000525922 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
PPFIA1-204ENST00000525922 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
PPFIA1-204ENST00000525922 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
PPFIA1-204ENST00000525922 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
PPFIA1-204ENST00000525922 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
PPFIA1-204ENST00000525922 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
PPFIA1-204ENST00000525922 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
PPFIA1-204ENST00000525922 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
PPFIA1-204ENST00000525922 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
PPFIA1-204ENST00000525922 SOGA1O94964 1423 aa13.84□□□□□ -0.19
PPFIA1-204ENST00000525922 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
PPFIA1-204ENST00000525922 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
PPFIA1-204ENST00000525922 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
PPFIA1-204ENST00000525922 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
PPFIA1-204ENST00000525922 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-204ENST00000525922 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-204ENST00000525922 CUX1P39880 1505 aa13.8□□□□□ -0.2
PPFIA1-204ENST00000525922 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
PPFIA1-204ENST00000525922 FBLN2P98095 1184 aa13.79□□□□□ -0.2
PPFIA1-204ENST00000525922 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
PPFIA1-204ENST00000525922 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
PPFIA1-204ENST00000525922 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
PPFIA1-204ENST00000525922 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
PPFIA1-204ENST00000525922 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
PPFIA1-204ENST00000525922 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
PPFIA1-204ENST00000525922 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-204ENST00000525922 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
PPFIA1-204ENST00000525922 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
PPFIA1-204ENST00000525922 CHD1O14646 1710 aa13.61□□□□□ -0.23
PPFIA1-204ENST00000525922 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
PPFIA1-204ENST00000525922 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
PPFIA1-204ENST00000525922 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
PPFIA1-204ENST00000525922 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
PPFIA1-204ENST00000525922 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
PPFIA1-204ENST00000525922 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
PPFIA1-204ENST00000525922 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
PPFIA1-204ENST00000525922 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
PPFIA1-204ENST00000525922 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
PPFIA1-204ENST00000525922 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
PPFIA1-204ENST00000525922 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
PPFIA1-204ENST00000525922 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
PPFIA1-204ENST00000525922 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
PPFIA1-204ENST00000525922 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
PPFIA1-204ENST00000525922 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
PPFIA1-204ENST00000525922 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
PPFIA1-204ENST00000525922 KIF27Q86VH2 1401 aa13.43□□□□□ -0.26
PPFIA1-204ENST00000525922 NUP160Q12769 1436 aa13.42□□□□□ -0.26
PPFIA1-204ENST00000525922 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
PPFIA1-204ENST00000525922 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
PPFIA1-204ENST00000525922 IGF1RP08069 1367 aa13.38□□□□□ -0.27
PPFIA1-204ENST00000525922 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
PPFIA1-204ENST00000525922 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
PPFIA1-204ENST00000525922 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
PPFIA1-204ENST00000525922 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms