RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
PPFIA1-225ENST00000638133 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
PPFIA1-225ENST00000638133 ABCC9O60706 1549 aa32.01■■■□□ 2.72
PPFIA1-225ENST00000638133 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
PPFIA1-225ENST00000638133 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
PPFIA1-225ENST00000638133 NACADO15069 1562 aa30.58■■■□□ 2.49
PPFIA1-225ENST00000638133 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
PPFIA1-225ENST00000638133 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
PPFIA1-225ENST00000638133 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
PPFIA1-225ENST00000638133 UNC13AQ9UPW8 1703 aa29.96■■■□□ 2.39
PPFIA1-225ENST00000638133 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
PPFIA1-225ENST00000638133 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
PPFIA1-225ENST00000638133 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
PPFIA1-225ENST00000638133 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
PPFIA1-225ENST00000638133 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
PPFIA1-225ENST00000638133 EIF4G1Q04637 1599 aaKnown RBP28.98■■■□□ 2.23
PPFIA1-225ENST00000638133 CC2D2AQ9P2K1 1620 aa28.93■■■□□ 2.22
PPFIA1-225ENST00000638133 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
PPFIA1-225ENST00000638133 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
PPFIA1-225ENST00000638133 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
PPFIA1-225ENST00000638133 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
PPFIA1-225ENST00000638133 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
PPFIA1-225ENST00000638133 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
PPFIA1-225ENST00000638133 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
PPFIA1-225ENST00000638133 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
PPFIA1-225ENST00000638133 BAZ1BQ9UIG0 1483 aaKnown RBP27.99■■■□□ 2.07
PPFIA1-225ENST00000638133 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
PPFIA1-225ENST00000638133 WIZO95785 1651 aa27.73■■■□□ 2.03
PPFIA1-225ENST00000638133 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
PPFIA1-225ENST00000638133 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
PPFIA1-225ENST00000638133 NESP48681 1621 aa27.59■■■□□ 2.01
PPFIA1-225ENST00000638133 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
PPFIA1-225ENST00000638133 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
PPFIA1-225ENST00000638133 CUX2O14529 1486 aa27.39■■□□□ 1.98
PPFIA1-225ENST00000638133 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
PPFIA1-225ENST00000638133 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
PPFIA1-225ENST00000638133 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
PPFIA1-225ENST00000638133 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
PPFIA1-225ENST00000638133 CFTRP13569 1480 aa27.14■■□□□ 1.94
PPFIA1-225ENST00000638133 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
PPFIA1-225ENST00000638133 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
PPFIA1-225ENST00000638133 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
PPFIA1-225ENST00000638133 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
PPFIA1-225ENST00000638133 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
PPFIA1-225ENST00000638133 WDR62O43379 1518 aa26.97■■□□□ 1.91
PPFIA1-225ENST00000638133 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
PPFIA1-225ENST00000638133 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
PPFIA1-225ENST00000638133 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
PPFIA1-225ENST00000638133 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
PPFIA1-225ENST00000638133 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
PPFIA1-225ENST00000638133 DNMBPQ6XZF7 1577 aa26.57■■□□□ 1.84
PPFIA1-225ENST00000638133 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
PPFIA1-225ENST00000638133 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
PPFIA1-225ENST00000638133 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
PPFIA1-225ENST00000638133 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
PPFIA1-225ENST00000638133 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
PPFIA1-225ENST00000638133 CUX1P39880 1505 aa26.29■■□□□ 1.8
PPFIA1-225ENST00000638133 SOGA1O94964 1423 aa26.28■■□□□ 1.8
PPFIA1-225ENST00000638133 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
PPFIA1-225ENST00000638133 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
PPFIA1-225ENST00000638133 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
PPFIA1-225ENST00000638133 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.792e-6■■■■■ 36.8
PPFIA1-225ENST00000638133 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
PPFIA1-225ENST00000638133 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
PPFIA1-225ENST00000638133 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
PPFIA1-225ENST00000638133 FBLN2P98095 1184 aa26.07■■□□□ 1.76
PPFIA1-225ENST00000638133 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
PPFIA1-225ENST00000638133 CHD1O14646 1710 aa26.03■■□□□ 1.76
PPFIA1-225ENST00000638133 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
PPFIA1-225ENST00000638133 GRIN2BQ13224 1484 aa26■■□□□ 1.75
PPFIA1-225ENST00000638133 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
PPFIA1-225ENST00000638133 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
PPFIA1-225ENST00000638133 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
PPFIA1-225ENST00000638133 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
PPFIA1-225ENST00000638133 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
PPFIA1-225ENST00000638133 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
PPFIA1-225ENST00000638133 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
PPFIA1-225ENST00000638133 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
PPFIA1-225ENST00000638133 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
PPFIA1-225ENST00000638133 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
PPFIA1-225ENST00000638133 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
PPFIA1-225ENST00000638133 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
PPFIA1-225ENST00000638133 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
PPFIA1-225ENST00000638133 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
PPFIA1-225ENST00000638133 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
PPFIA1-225ENST00000638133 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
PPFIA1-225ENST00000638133 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
PPFIA1-225ENST00000638133 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
PPFIA1-225ENST00000638133 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
PPFIA1-225ENST00000638133 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
PPFIA1-225ENST00000638133 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
PPFIA1-225ENST00000638133 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
PPFIA1-225ENST00000638133 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
PPFIA1-225ENST00000638133 NUP160Q12769 1436 aa25.51■■□□□ 1.67
PPFIA1-225ENST00000638133 CUL7Q14999 1698 aa25.45■■□□□ 1.66
PPFIA1-225ENST00000638133 IGF1RP08069 1367 aa25.44■■□□□ 1.66
PPFIA1-225ENST00000638133 SHROOM2Q13796 1616 aa25.35■■□□□ 1.65
PPFIA1-225ENST00000638133 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
PPFIA1-225ENST00000638133 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
PPFIA1-225ENST00000638133 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms