RNA–Protein interactions for RNA: ENST00000530548.5

PPFIA1-215, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-215ENST00000530548 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
PPFIA1-215ENST00000530548 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
PPFIA1-215ENST00000530548 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
PPFIA1-215ENST00000530548 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
PPFIA1-215ENST00000530548 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
PPFIA1-215ENST00000530548 ABCC9O60706 1549 aa13.16□□□□□ -0.3
PPFIA1-215ENST00000530548 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.32
PPFIA1-215ENST00000530548 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
PPFIA1-215ENST00000530548 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
PPFIA1-215ENST00000530548 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
PPFIA1-215ENST00000530548 CHIC1Q5VXU3 224 aa12.78□□□□□ -0.36
PPFIA1-215ENST00000530548 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
PPFIA1-215ENST00000530548 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
PPFIA1-215ENST00000530548 TTBK1Q5TCY1 1321 aaPredicted RBP12.71□□□□□ -0.38
PPFIA1-215ENST00000530548 SCRIBQ14160 1630 aa12.69□□□□□ -0.38
PPFIA1-215ENST00000530548 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
PPFIA1-215ENST00000530548 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
PPFIA1-215ENST00000530548 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
PPFIA1-215ENST00000530548 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
PPFIA1-215ENST00000530548 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
PPFIA1-215ENST00000530548 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
PPFIA1-215ENST00000530548 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
PPFIA1-215ENST00000530548 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
PPFIA1-215ENST00000530548 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
PPFIA1-215ENST00000530548 NACADO15069 1562 aa12.22□□□□□ -0.45
PPFIA1-215ENST00000530548 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-215ENST00000530548 APLP2Q06481 763 aa12.17□□□□□ -0.46
PPFIA1-215ENST00000530548 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
PPFIA1-215ENST00000530548 TRIM26Q12899 539 aaPredicted RBP12.07□□□□□ -0.48
PPFIA1-215ENST00000530548 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
PPFIA1-215ENST00000530548 WIZO95785 1651 aa12.01□□□□□ -0.49
PPFIA1-215ENST00000530548 ITGAEP38570 1179 aa12□□□□□ -0.49
PPFIA1-215ENST00000530548 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
PPFIA1-215ENST00000530548 HRCP23327 699 aa11.98□□□□□ -0.49
PPFIA1-215ENST00000530548 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
PPFIA1-215ENST00000530548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
PPFIA1-215ENST00000530548 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
PPFIA1-215ENST00000530548 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
PPFIA1-215ENST00000530548 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
PPFIA1-215ENST00000530548 ABCC8Q09428 1581 aa11.89□□□□□ -0.51
PPFIA1-215ENST00000530548 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-215ENST00000530548 SOGA1O94964 1423 aa11.84□□□□□ -0.51
PPFIA1-215ENST00000530548 ARID3CA6NKF2 412 aa11.83□□□□□ -0.51
PPFIA1-215ENST00000530548 WRNQ14191 1432 aaPredicted RBP eCLIP11.78□□□□□ -0.52
PPFIA1-215ENST00000530548 FBLN2P98095 1184 aa11.78□□□□□ -0.52
PPFIA1-215ENST00000530548 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
PPFIA1-215ENST00000530548 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
PPFIA1-215ENST00000530548 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
PPFIA1-215ENST00000530548 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
PPFIA1-215ENST00000530548 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
PPFIA1-215ENST00000530548 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
PPFIA1-215ENST00000530548 DNAJC5BQ9UF47 199 aa11.68□□□□□ -0.54
PPFIA1-215ENST00000530548 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
PPFIA1-215ENST00000530548 YTHDC1Q96MU7 727 aaKnown RBP11.63□□□□□ -0.55
PPFIA1-215ENST00000530548 BICRAQ9NZM4 1560 aa11.63□□□□□ -0.55
PPFIA1-215ENST00000530548 SMARCA2P51531 1590 aa11.61□□□□□ -0.55
PPFIA1-215ENST00000530548 CLIP1P30622 1438 aa11.6□□□□□ -0.55
PPFIA1-215ENST00000530548 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
PPFIA1-215ENST00000530548 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
PPFIA1-215ENST00000530548 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
PPFIA1-215ENST00000530548 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
PPFIA1-215ENST00000530548 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
PPFIA1-215ENST00000530548 CUX2O14529 1486 aa11.51□□□□□ -0.57
PPFIA1-215ENST00000530548 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
PPFIA1-215ENST00000530548 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-215ENST00000530548 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
PPFIA1-215ENST00000530548 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
PPFIA1-215ENST00000530548 RAPGEF2Q9Y4G8 1499 aa11.48□□□□□ -0.57
PPFIA1-215ENST00000530548 KANK4Q5T7N3 995 aaPredicted RBP11.47□□□□□ -0.57
PPFIA1-215ENST00000530548 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
PPFIA1-215ENST00000530548 EEA1Q15075 1411 aa11.47□□□□□ -0.57
PPFIA1-215ENST00000530548 NESP48681 1621 aa11.44□□□□□ -0.58
PPFIA1-215ENST00000530548 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
PPFIA1-215ENST00000530548 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
PPFIA1-215ENST00000530548 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
PPFIA1-215ENST00000530548 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
PPFIA1-215ENST00000530548 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
PPFIA1-215ENST00000530548 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
PPFIA1-215ENST00000530548 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
PPFIA1-215ENST00000530548 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
PPFIA1-215ENST00000530548 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
PPFIA1-215ENST00000530548 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
PPFIA1-215ENST00000530548 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
PPFIA1-215ENST00000530548 FANCD2Q9BXW9 1451 aa11.36□□□□□ -0.59
PPFIA1-215ENST00000530548 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
PPFIA1-215ENST00000530548 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
PPFIA1-215ENST00000530548 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
PPFIA1-215ENST00000530548 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
PPFIA1-215ENST00000530548 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
PPFIA1-215ENST00000530548 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
PPFIA1-215ENST00000530548 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
PPFIA1-215ENST00000530548 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
PPFIA1-215ENST00000530548 IGF1RP08069 1367 aa11.29□□□□□ -0.6
PPFIA1-215ENST00000530548 CFTRP13569 1480 aa11.28□□□□□ -0.6
PPFIA1-215ENST00000530548 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
PPFIA1-215ENST00000530548 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.6
PPFIA1-215ENST00000530548 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.6
PPFIA1-215ENST00000530548 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
PPFIA1-215ENST00000530548 CUX1P39880 1505 aa11.27□□□□□ -0.61
PPFIA1-215ENST00000530548 SIN3AQ96ST3 1273 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms